RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 SAT2Q96F10 170 aaPredicted RBP10.41□□□□□ -0.74
SMPD4-215ENST00000457039 LINC00052Q96N35 136 aa10.41□□□□□ -0.74
SMPD4-215ENST00000457039 ZNF586Q9NXT0 402 aa10.41□□□□□ -0.74
SMPD4-215ENST00000457039 KIR2DL5BA0A0G2JN68 375 aa10.4□□□□□ -0.74
SMPD4-215ENST00000457039 KIR2DL5BA0A0G2JPC4 375 aa10.4□□□□□ -0.74
SMPD4-215ENST00000457039 SLC17A3O00476 420 aa10.4□□□□□ -0.74
SMPD4-215ENST00000457039 BCL2L11O43521 198 aa10.4□□□□□ -0.74
SMPD4-215ENST00000457039 SNRPCP09234 159 aaKnown RBP10.4□□□□□ -0.74
SMPD4-215ENST00000457039 PYYP10082 97 aa10.4□□□□□ -0.74
SMPD4-215ENST00000457039 HIST1H1EP10412 219 aaKnown RBP10.4□□□□□ -0.74
SMPD4-215ENST00000457039 RPL35AP18077 110 aaKnown RBP10.4□□□□□ -0.74
SMPD4-215ENST00000457039 DEFB1P60022 68 aa10.4□□□□□ -0.74
SMPD4-215ENST00000457039 GUK1Q16774 197 aa10.4□□□□□ -0.74
SMPD4-215ENST00000457039 LGALSLQ3ZCW2 172 aaPredicted RBP10.4□□□□□ -0.74
SMPD4-215ENST00000457039 KIR2DL5AQ8N109 375 aa10.4□□□□□ -0.74
SMPD4-215ENST00000457039 KIR2DL5BQ8NHK3 375 aa10.4□□□□□ -0.74
SMPD4-215ENST00000457039 ZNF503Q96F45 646 aa10.4□□□□□ -0.74
SMPD4-215ENST00000457039 SLC50A1Q9BRV3 221 aa10.4□□□□□ -0.74
SMPD4-215ENST00000457039 ZNF331Q9NQX6 463 aaPredicted RBP10.4□□□□□ -0.74
SMPD4-215ENST00000457039 TRBV19A0A075B6N1 114 aa10.39□□□□□ -0.75
SMPD4-215ENST00000457039 H3BMM0 161 aa10.39□□□□□ -0.75
SMPD4-215ENST00000457039 H3BTX0 84 aa10.39□□□□□ -0.75
SMPD4-215ENST00000457039 ZNF253O75346 499 aa10.39□□□□□ -0.75
SMPD4-215ENST00000457039 HLA-DRB4P13762 266 aa10.39□□□□□ -0.75
SMPD4-215ENST00000457039 HLA-DMBP28068 263 aa10.39□□□□□ -0.75
SMPD4-215ENST00000457039 ACTL10Q5JWF8 245 aa10.39□□□□□ -0.75
SMPD4-215ENST00000457039 GDF5OSQ5U4N7 250 aa10.39□□□□□ -0.75
SMPD4-215ENST00000457039 FOXI2Q6ZQN5 318 aa10.39□□□□□ -0.75
SMPD4-215ENST00000457039 TMUB2Q71RG4 321 aa10.39□□□□□ -0.75
SMPD4-215ENST00000457039 STHQ8IWL8 128 aa10.39□□□□□ -0.75
SMPD4-215ENST00000457039 RPP25LQ8N5L8 163 aaKnown RBP10.39□□□□□ -0.75
SMPD4-215ENST00000457039 RNF182Q8N6D2 247 aa10.39□□□□□ -0.75
SMPD4-215ENST00000457039 OR10G4Q8NGN3 311 aa10.39□□□□□ -0.75
SMPD4-215ENST00000457039 OR10G9Q8NGN4 311 aa10.39□□□□□ -0.75
SMPD4-215ENST00000457039 OR10G7Q8NGN6 311 aa10.39□□□□□ -0.75
SMPD4-215ENST00000457039 FXYD5Q96DB9 178 aa10.39□□□□□ -0.75
SMPD4-215ENST00000457039 HYLS1Q96M11 299 aa10.39□□□□□ -0.75
SMPD4-215ENST00000457039 OR51M1Q9H341 326 aa10.39□□□□□ -0.75
SMPD4-215ENST00000457039 SAV1Q9H4B6 383 aaPredicted RBP10.39□□□□□ -0.75
SMPD4-215ENST00000457039 HLA-DRB4X5D2U9 266 aa10.39□□□□□ -0.75
SMPD4-215ENST00000457039 KANTRA0A1W2PQU2 76 aa10.38□□□□□ -0.75
SMPD4-215ENST00000457039 EIF3GO75821 320 aaKnown RBP eCLIP10.38□□□□□ -0.75
SMPD4-215ENST00000457039 NDUFB4O95168 129 aa10.38□□□□□ -0.75
SMPD4-215ENST00000457039 MBP02144 154 aa10.38□□□□□ -0.75
SMPD4-215ENST00000457039 SPP1P10451 314 aa10.38□□□□□ -0.75
SMPD4-215ENST00000457039 APOC4P55056 127 aa10.38□□□□□ -0.75
SMPD4-215ENST00000457039 PDE6HQ13956 83 aa10.38□□□□□ -0.75
SMPD4-215ENST00000457039 FAM122CQ6P4D5 195 aa10.38□□□□□ -0.75
SMPD4-215ENST00000457039 PAXXQ9BUH6 204 aa10.38□□□□□ -0.75
SMPD4-215ENST00000457039 RPRMQ9NS64 109 aa10.38□□□□□ -0.75
SMPD4-215ENST00000457039 AGRNO00468 2067 aa10.37□□□□□ -0.75
SMPD4-215ENST00000457039 A0A0J9YX75 114 aa10.37□□□□□ -0.75
SMPD4-215ENST00000457039 F6UB75 175 aa10.37□□□□□ -0.75
SMPD4-215ENST00000457039 CDC34P49427 236 aaPredicted RBP10.37□□□□□ -0.75
SMPD4-215ENST00000457039 TAS2R45P59539 299 aa10.37□□□□□ -0.75
SMPD4-215ENST00000457039 PSG3Q16557 428 aa10.37□□□□□ -0.75
SMPD4-215ENST00000457039 KHDC3LQ587J8 217 aa10.37□□□□□ -0.75
SMPD4-215ENST00000457039 TMEM41BQ5BJD5 291 aa10.37□□□□□ -0.75
SMPD4-215ENST00000457039 NBEAL2Q6ZNJ1 2754 aa10.37□□□□□ -0.75
SMPD4-215ENST00000457039 LRRC20Q8TCA0 184 aa10.37□□□□□ -0.75
SMPD4-215ENST00000457039 RNF141Q8WVD5 230 aa10.37□□□□□ -0.75
SMPD4-215ENST00000457039 SPATA25Q9BR10 227 aa10.37□□□□□ -0.75
SMPD4-215ENST00000457039 CSTL1Q9H114 145 aa10.37□□□□□ -0.75
SMPD4-215ENST00000457039 TENM3Q9P273 2699 aa10.36□□□□□ -0.75
SMPD4-215ENST00000457039 A0A1W2PPV4 95 aa10.36□□□□□ -0.75
SMPD4-215ENST00000457039 A8MTW9 85 aa10.36□□□□□ -0.75
SMPD4-215ENST00000457039 UBE2CO00762 179 aa10.36□□□□□ -0.75
SMPD4-215ENST00000457039 OR7C2O60412 319 aa10.36□□□□□ -0.75
SMPD4-215ENST00000457039 GIG44P09565 113 aaPredicted RBP10.36□□□□□ -0.75
SMPD4-215ENST00000457039 OR10J4P0C629 311 aa10.36□□□□□ -0.75
SMPD4-215ENST00000457039 STAG3L2P0CL84 134 aa10.36□□□□□ -0.75
SMPD4-215ENST00000457039 STAG3L3P0CL85 134 aa10.36□□□□□ -0.75
SMPD4-215ENST00000457039 STOML3Q8TAV4 291 aa10.36□□□□□ -0.75
SMPD4-215ENST00000457039 CLUHP3Q96NS8 147 aa10.36□□□□□ -0.75
SMPD4-215ENST00000457039 ZNF471Q9BX82 626 aaPredicted RBP10.36□□□□□ -0.75
SMPD4-215ENST00000457039 CLEC5AQ9NY25 188 aa10.36□□□□□ -0.75
SMPD4-215ENST00000457039 PLA2G2EQ9NZK7 142 aa10.36□□□□□ -0.75
SMPD4-215ENST00000457039 PFDN1O60925 122 aa10.35□□□□□ -0.75
SMPD4-215ENST00000457039 NBEAP1P0C6P0 100 aa10.35□□□□□ -0.75
SMPD4-215ENST00000457039 ZNF726P1Q15940 193 aa10.35□□□□□ -0.75
SMPD4-215ENST00000457039 EBLN2Q6P2I7 272 aa10.35□□□□□ -0.75
SMPD4-215ENST00000457039 MORN3Q6PF18 240 aaPredicted RBP10.35□□□□□ -0.75
SMPD4-215ENST00000457039 PQLC2Q6ZP29 291 aa10.35□□□□□ -0.75
SMPD4-215ENST00000457039 Q6ZWC4 215 aa10.35□□□□□ -0.75
SMPD4-215ENST00000457039 SSX7Q7RTT5 188 aa10.35□□□□□ -0.75
SMPD4-215ENST00000457039 C9orf62Q8N4C0 152 aa10.35□□□□□ -0.75
SMPD4-215ENST00000457039 ZNF738Q8NE65 137 aa10.35□□□□□ -0.75
SMPD4-215ENST00000457039 BLNKQ8WV28 456 aa10.35□□□□□ -0.75
SMPD4-215ENST00000457039 RAB24Q969Q5 203 aa10.35□□□□□ -0.75
SMPD4-215ENST00000457039 ZMAT4Q9H898 229 aa10.35□□□□□ -0.75
SMPD4-215ENST00000457039 RETNQ9HD89 108 aa10.35□□□□□ -0.75
SMPD4-215ENST00000457039 ZNF705FA8MVS1 300 aaPredicted RBP10.34□□□□□ -0.75
SMPD4-215ENST00000457039 HMGB3O15347 200 aaKnown RBP10.34□□□□□ -0.75
SMPD4-215ENST00000457039 SEC11BP0C7V7 166 aa10.34□□□□□ -0.75
SMPD4-215ENST00000457039 C4BPBP20851 252 aa10.34□□□□□ -0.75
SMPD4-215ENST00000457039 UBE2L3P68036 154 aaKnown RBP10.34□□□□□ -0.75
SMPD4-215ENST00000457039 PSG9Q00887 426 aa10.34□□□□□ -0.75
SMPD4-215ENST00000457039 ZFP69Q49AA0 526 aa10.34□□□□□ -0.75
SMPD4-215ENST00000457039 BAP18Q8IXM2 172 aa10.34□□□□□ -0.75
SMPD4-215ENST00000457039 RPUSD4Q96CM3 377 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms