RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 TMEM208Q9BTX3 173 aa11.23□□□□□ -0.61
GPC1-206ENST00000455111 LINC00854A0A1B0GVQ3 168 aa11.22□□□□□ -0.61
GPC1-206ENST00000455111 LYRM9A8MSI8 78 aa11.22□□□□□ -0.61
GPC1-206ENST00000455111 SLC17A3O00476 420 aa11.22□□□□□ -0.61
GPC1-206ENST00000455111 OR5G3P0C626 314 aa11.22□□□□□ -0.61
GPC1-206ENST00000455111 DEFB130BP0DP73 79 aa11.22□□□□□ -0.61
GPC1-206ENST00000455111 DEFB130AP0DP74 79 aa11.22□□□□□ -0.61
GPC1-206ENST00000455111 S100A5P33763 92 aa11.22□□□□□ -0.61
GPC1-206ENST00000455111 HIST1H1AQ02539 215 aaPredicted RBP11.22□□□□□ -0.61
GPC1-206ENST00000455111 TMEM37Q8WXS4 190 aa11.22□□□□□ -0.61
GPC1-206ENST00000455111 ARL6Q9H0F7 186 aa11.22□□□□□ -0.61
GPC1-206ENST00000455111 ARV1Q9H2C2 271 aa11.22□□□□□ -0.61
GPC1-206ENST00000455111 C11orf1Q9H5F2 150 aa11.22□□□□□ -0.61
GPC1-206ENST00000455111 H3BTX0 84 aa11.21□□□□□ -0.61
GPC1-206ENST00000455111 RPL7P18124 248 aaKnown RBP11.21□□□□□ -0.61
GPC1-206ENST00000455111 RAP2BP61225 183 aa11.21□□□□□ -0.61
GPC1-206ENST00000455111 TNP2Q05952 138 aa11.21□□□□□ -0.61
GPC1-206ENST00000455111 MGST2Q99735 147 aa11.21□□□□□ -0.61
GPC1-206ENST00000455111 NPVFQ9HCQ7 196 aa11.21□□□□□ -0.61
GPC1-206ENST00000455111 ZNF331Q9NQX6 463 aaPredicted RBP11.21□□□□□ -0.61
GPC1-206ENST00000455111 C7orf66A4D0T2 115 aa11.2□□□□□ -0.62
GPC1-206ENST00000455111 NAP1L6A6NFF2 107 aa11.2□□□□□ -0.62
GPC1-206ENST00000455111 CCDC160A6NGH7 325 aa11.2□□□□□ -0.62
GPC1-206ENST00000455111 FNDC10F2Z333 226 aa11.2□□□□□ -0.62
GPC1-206ENST00000455111 CCSO14618 274 aa11.2□□□□□ -0.62
GPC1-206ENST00000455111 PLA2G10O15496 165 aa11.2□□□□□ -0.62
GPC1-206ENST00000455111 MBPP02686 304 aaPredicted RBP11.2□□□□□ -0.62
GPC1-206ENST00000455111 IAH1Q2TAA2 248 aaPredicted RBP11.2□□□□□ -0.62
GPC1-206ENST00000455111 RNASE8Q8TDE3 154 aaKnown RBP11.2□□□□□ -0.62
GPC1-206ENST00000455111 LINC00588Q9Y4M8 146 aa11.2□□□□□ -0.62
GPC1-206ENST00000455111 AGPAT2O15120 278 aa11.19□□□□□ -0.62
GPC1-206ENST00000455111 TSC22D2O75157 780 aa11.19□□□□□ -0.62
GPC1-206ENST00000455111 SCGB1D2O95969 90 aa11.19□□□□□ -0.62
GPC1-206ENST00000455111 SELENOTP62341 195 aa11.19□□□□□ -0.62
GPC1-206ENST00000455111 LINC00612Q8N6U2 182 aa11.19□□□□□ -0.62
GPC1-206ENST00000455111 C15orf53Q8NAA6 179 aa11.19□□□□□ -0.62
GPC1-206ENST00000455111 MITD1Q8WV92 249 aa11.19□□□□□ -0.62
GPC1-206ENST00000455111 RNF141Q8WVD5 230 aa11.19□□□□□ -0.62
GPC1-206ENST00000455111 RPUSD4Q96CM3 377 aaKnown RBP11.19□□□□□ -0.62
GPC1-206ENST00000455111 F5H768 121 aa11.18□□□□□ -0.62
GPC1-206ENST00000455111 H3BQ15 152 aa11.18□□□□□ -0.62
GPC1-206ENST00000455111 IGLC2P0DOY2 106 aa11.18□□□□□ -0.62
GPC1-206ENST00000455111 IL7P13232 177 aa11.18□□□□□ -0.62
GPC1-206ENST00000455111 RHOBP62745 196 aa11.18□□□□□ -0.62
GPC1-206ENST00000455111 OPCMLQ14982 345 aa11.18□□□□□ -0.62
GPC1-206ENST00000455111 C1orf134Q5TEV5 83 aa11.18□□□□□ -0.62
GPC1-206ENST00000455111 TEPPQ6URK8 271 aa11.18□□□□□ -0.62
GPC1-206ENST00000455111 LINC00305Q7Z4B0 112 aa11.18□□□□□ -0.62
GPC1-206ENST00000455111 SAT2Q96F10 170 aaPredicted RBP11.18□□□□□ -0.62
GPC1-206ENST00000455111 LINC01587Q99440 93 aa11.18□□□□□ -0.62
GPC1-206ENST00000455111 KRTAP1-5Q9BYS1 174 aa11.18□□□□□ -0.62
GPC1-206ENST00000455111 TRAV5A0A0B4J249 113 aa11.17□□□□□ -0.62
GPC1-206ENST00000455111 ZNF701M0R085 212 aaPredicted RBP11.17□□□□□ -0.62
GPC1-206ENST00000455111 TAS2R30P59541 319 aa11.17□□□□□ -0.62
GPC1-206ENST00000455111 TAS2R60P59551 318 aa11.17□□□□□ -0.62
GPC1-206ENST00000455111 C4orf46Q504U0 113 aa11.17□□□□□ -0.62
GPC1-206ENST00000455111 SPANXN2Q5MJ10 180 aa11.17□□□□□ -0.62
GPC1-206ENST00000455111 OR10P1Q8NGE3 313 aa11.17□□□□□ -0.62
GPC1-206ENST00000455111 NBDYA0A0U1RRE5 68 aa11.16□□□□□ -0.62
GPC1-206ENST00000455111 CBY3A6NI87 242 aa11.16□□□□□ -0.62
GPC1-206ENST00000455111 NUDT3O95989 172 aa11.16□□□□□ -0.62
GPC1-206ENST00000455111 HTN1P15515 57 aa11.16□□□□□ -0.62
GPC1-206ENST00000455111 HOXA5P20719 270 aa11.16□□□□□ -0.62
GPC1-206ENST00000455111 CDKN1BP46527 198 aa11.16□□□□□ -0.62
GPC1-206ENST00000455111 B2MP61769 119 aa11.16□□□□□ -0.62
GPC1-206ENST00000455111 GFI1BQ5VTD9 330 aa11.16□□□□□ -0.62
GPC1-206ENST00000455111 TRIQKQ629K1 86 aa11.16□□□□□ -0.62
GPC1-206ENST00000455111 NOP10Q9NPE3 64 aaKnown RBP11.16□□□□□ -0.62
GPC1-206ENST00000455111 GSKIPQ9P0R6 139 aa11.16□□□□□ -0.62
GPC1-206ENST00000455111 ATP5G1P05496 136 aa11.15□□□□□ -0.62
GPC1-206ENST00000455111 CXCL2P19875 107 aa11.15□□□□□ -0.62
GPC1-206ENST00000455111 ATP5G3P48201 142 aa11.15□□□□□ -0.62
GPC1-206ENST00000455111 MIC13Q5XKP0 118 aa11.15□□□□□ -0.62
GPC1-206ENST00000455111 TMEM256Q8N2U0 113 aa11.15□□□□□ -0.62
GPC1-206ENST00000455111 C16orf74Q96GX8 76 aa11.15□□□□□ -0.62
GPC1-206ENST00000455111 FAM24AA6NFZ4 105 aa11.14□□□□□ -0.63
GPC1-206ENST00000455111 CT45A10P0DMU9 189 aa11.14□□□□□ -0.63
GPC1-206ENST00000455111 FAM3BP58499 235 aaPredicted RBP11.14□□□□□ -0.63
GPC1-206ENST00000455111 IL15RAQ13261 267 aa11.14□□□□□ -0.63
GPC1-206ENST00000455111 LCN15Q6UWW0 184 aa11.14□□□□□ -0.63
GPC1-206ENST00000455111 ZNF546Q86UE3 836 aa11.14□□□□□ -0.63
GPC1-206ENST00000455111 TMEM263Q8WUH6 116 aaKnown RBP11.14□□□□□ -0.63
GPC1-206ENST00000455111 SEC22CQ9BRL7 303 aa11.14□□□□□ -0.63
GPC1-206ENST00000455111 C20orf85Q9H1P6 137 aa11.14□□□□□ -0.63
GPC1-206ENST00000455111 ZNF586Q9NXT0 402 aa11.14□□□□□ -0.63
GPC1-206ENST00000455111 MGAT4CQ9UBM8 478 aa11.14□□□□□ -0.63
GPC1-206ENST00000455111 GOSR2O14653 212 aa11.13□□□□□ -0.63
GPC1-206ENST00000455111 S100A7P31151 101 aa11.13□□□□□ -0.63
GPC1-206ENST00000455111 PXDC1Q5TGL8 231 aa11.13□□□□□ -0.63
GPC1-206ENST00000455111 SLC50A1Q9BRV3 221 aa11.13□□□□□ -0.63
GPC1-206ENST00000455111 GGACTQ9BVM4 153 aa11.13□□□□□ -0.63
GPC1-206ENST00000455111 WDR83OSQ9Y284 106 aa11.13□□□□□ -0.63
GPC1-206ENST00000455111 TIMM8BQ9Y5J9 83 aaPredicted RBP11.13□□□□□ -0.63
GPC1-206ENST00000455111 H7BYZ3 331 aa11.12□□□□□ -0.63
GPC1-206ENST00000455111 CST7O76096 145 aa11.12□□□□□ -0.63
GPC1-206ENST00000455111 INPP1P49441 399 aa11.12□□□□□ -0.63
GPC1-206ENST00000455111 VWC2Q2TAL6 325 aa11.12□□□□□ -0.63
GPC1-206ENST00000455111 NRARPQ7Z6K4 114 aa11.12□□□□□ -0.63
GPC1-206ENST00000455111 C6orf223Q8N319 242 aa11.12□□□□□ -0.63
GPC1-206ENST00000455111 LRRC20Q8TCA0 184 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms