RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 SFTA3P0C7M3 94 aa8.31□□□□□ -1.08
SCN9A-205ENST00000454569 BCL2P10415 239 aa8.31□□□□□ -1.08
SCN9A-205ENST00000454569 GP9P14770 177 aa8.31□□□□□ -1.08
SCN9A-205ENST00000454569 PSMB3P49720 205 aa8.31□□□□□ -1.08
SCN9A-205ENST00000454569 PPT1P50897 306 aa8.31□□□□□ -1.08
SCN9A-205ENST00000454569 ZNF506Q5JVG8 444 aa8.31□□□□□ -1.08
SCN9A-205ENST00000454569 METTL26Q96S19 204 aa8.31□□□□□ -1.08
SCN9A-205ENST00000454569 RHPN1-AS1Q9BWJ2 59 aa8.31□□□□□ -1.08
SCN9A-205ENST00000454569 SMDT1Q9H4I9 107 aa8.31□□□□□ -1.08
SCN9A-205ENST00000454569 DAZ1Q9NQZ3 744 aaKnown RBP8.31□□□□□ -1.08
SCN9A-205ENST00000454569 SMPXQ9UHP9 88 aa8.31□□□□□ -1.08
SCN9A-205ENST00000454569 F8W036 122 aa8.31□□□□□ -1.08
SCN9A-205ENST00000454569 FOLR2P14207 255 aa8.31□□□□□ -1.08
SCN9A-205ENST00000454569 CBLN1P23435 193 aa8.31□□□□□ -1.08
SCN9A-205ENST00000454569 GCHFRP30047 84 aa8.31□□□□□ -1.08
SCN9A-205ENST00000454569 MYCNOSP40205 109 aa8.31□□□□□ -1.08
SCN9A-205ENST00000454569 TAS2R45P59539 299 aa8.31□□□□□ -1.08
SCN9A-205ENST00000454569 KHDC3LQ587J8 217 aa8.31□□□□□ -1.08
SCN9A-205ENST00000454569 C16orf54Q6UWD8 224 aa8.31□□□□□ -1.08
SCN9A-205ENST00000454569 C12orf54Q6X4T0 127 aa8.31□□□□□ -1.08
SCN9A-205ENST00000454569 C3orf56Q8N813 242 aa8.31□□□□□ -1.08
SCN9A-205ENST00000454569 LINC00482Q8N8I6 264 aa8.31□□□□□ -1.08
SCN9A-205ENST00000454569 OR9G4Q8NGQ1 327 aa8.31□□□□□ -1.08
SCN9A-205ENST00000454569 GLMPQ8WWB7 406 aa8.31□□□□□ -1.08
SCN9A-205ENST00000454569 FXYD5Q96DB9 178 aa8.31□□□□□ -1.08
SCN9A-205ENST00000454569 RARRES2Q99969 163 aa8.31□□□□□ -1.08
SCN9A-205ENST00000454569 MANBALQ9NQG1 85 aa8.31□□□□□ -1.08
SCN9A-205ENST00000454569 ZNF586Q9NXT0 402 aa8.31□□□□□ -1.08
SCN9A-205ENST00000454569 TECRQ9NZ01 308 aaKnown RBP8.31□□□□□ -1.08
SCN9A-205ENST00000454569 MLXQ9UH92 298 aa8.31□□□□□ -1.08
SCN9A-205ENST00000454569 AGRNO00468 2067 aa8.3□□□□□ -1.08
SCN9A-205ENST00000454569 OR7C2O60412 319 aa8.3□□□□□ -1.08
SCN9A-205ENST00000454569 TAGLN2P37802 199 aaKnown RBP8.3□□□□□ -1.08
SCN9A-205ENST00000454569 ICAM4Q14773 271 aa8.3□□□□□ -1.08
SCN9A-205ENST00000454569 RXFP4Q8TDU9 374 aa8.3□□□□□ -1.08
SCN9A-205ENST00000454569 PAXXQ9BUH6 204 aa8.3□□□□□ -1.08
SCN9A-205ENST00000454569 ELOVL1Q9BW60 279 aa8.3□□□□□ -1.08
SCN9A-205ENST00000454569 OR51M1Q9H341 326 aa8.3□□□□□ -1.08
SCN9A-205ENST00000454569 VAX2Q9UIW0 290 aa8.3□□□□□ -1.08
SCN9A-205ENST00000454569 UFC1Q9Y3C8 167 aa8.3□□□□□ -1.08
SCN9A-205ENST00000454569 C9JQL5 133 aa8.29□□□□□ -1.08
SCN9A-205ENST00000454569 SLC17A3O00476 420 aa8.29□□□□□ -1.08
SCN9A-205ENST00000454569 OVOL1O14753 267 aa8.29□□□□□ -1.08
SCN9A-205ENST00000454569 APOC3P02656 99 aa8.29□□□□□ -1.08
SCN9A-205ENST00000454569 IGLC2P0DOY2 106 aa8.29□□□□□ -1.08
SCN9A-205ENST00000454569 ADCYAP1P18509 176 aa8.29□□□□□ -1.08
SCN9A-205ENST00000454569 PMS2P11Q13670 270 aa8.29□□□□□ -1.08
SCN9A-205ENST00000454569 FAM90A2PQ658T7 463 aa8.29□□□□□ -1.08
SCN9A-205ENST00000454569 IGFL4Q6B9Z1 124 aa8.29□□□□□ -1.08
SCN9A-205ENST00000454569 OR8I2Q8N0Y5 310 aa8.29□□□□□ -1.08
SCN9A-205ENST00000454569 SEC11CQ9BY50 192 aa8.29□□□□□ -1.08
SCN9A-205ENST00000454569 IGKV3-7A0A075B6H7 116 aa8.28□□□□□ -1.08
SCN9A-205ENST00000454569 NDUFB4O95168 129 aa8.28□□□□□ -1.08
SCN9A-205ENST00000454569 UBE2G2P60604 165 aa8.28□□□□□ -1.08
SCN9A-205ENST00000454569 MEF2BQ02080 365 aaPredicted RBP8.28□□□□□ -1.08
SCN9A-205ENST00000454569 PQLC2Q6ZP29 291 aa8.28□□□□□ -1.08
SCN9A-205ENST00000454569 BLNKQ8WV28 456 aa8.28□□□□□ -1.08
SCN9A-205ENST00000454569 SLC35B3Q9H1N7 401 aa8.28□□□□□ -1.08
SCN9A-205ENST00000454569 TMEM14CQ9P0S9 112 aa8.28□□□□□ -1.08
SCN9A-205ENST00000454569 YTHDF2Q9Y5A9 579 aaKnown RBP8.28□□□□□ -1.08
SCN9A-205ENST00000454569 IZUMO1RA6ND01 250 aa8.27□□□□□ -1.09
SCN9A-205ENST00000454569 PAGE4O60829 102 aa8.27□□□□□ -1.09
SCN9A-205ENST00000454569 SRP19P09132 144 aaKnown RBP8.27□□□□□ -1.09
SCN9A-205ENST00000454569 NBEAP1P0C6P0 100 aa8.27□□□□□ -1.09
SCN9A-205ENST00000454569 HLA-DMBP28068 263 aa8.27□□□□□ -1.09
SCN9A-205ENST00000454569 CEBPGP53567 150 aa8.27□□□□□ -1.09
SCN9A-205ENST00000454569 UBE2L3P68036 154 aaKnown RBP8.27□□□□□ -1.09
SCN9A-205ENST00000454569 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.27□□□□□ -1.09
SCN9A-205ENST00000454569 CCDC28AQ8IWP9 274 aa8.27□□□□□ -1.09
SCN9A-205ENST00000454569 CARHSP1Q9Y2V2 147 aaKnown RBP8.27□□□□□ -1.09
SCN9A-205ENST00000454569 HIST1H1EP10412 219 aaKnown RBP8.27□□□□□ -1.09
SCN9A-205ENST00000454569 C10orf91Q5T1B1 145 aa8.27□□□□□ -1.09
SCN9A-205ENST00000454569 C1orf194Q5T5A4 169 aa8.27□□□□□ -1.09
SCN9A-205ENST00000454569 SIGLEC15Q6ZMC9 328 aa8.27□□□□□ -1.09
SCN9A-205ENST00000454569 TCF24Q7RTU0 167 aa8.27□□□□□ -1.09
SCN9A-205ENST00000454569 BPIFA4PQ86YQ2 179 aa8.27□□□□□ -1.09
SCN9A-205ENST00000454569 GBGT1Q8N5D6 347 aa8.27□□□□□ -1.09
SCN9A-205ENST00000454569 OR4F17Q8NGA8 305 aa8.27□□□□□ -1.09
SCN9A-205ENST00000454569 OR4F4Q96R69 305 aa8.27□□□□□ -1.09
SCN9A-205ENST00000454569 TMEM167BQ9NRX6 74 aa8.27□□□□□ -1.09
SCN9A-205ENST00000454569 TRBV19A0A075B6N1 114 aa8.26□□□□□ -1.09
SCN9A-205ENST00000454569 TRAV8-2A0A0B4J237 113 aa8.26□□□□□ -1.09
SCN9A-205ENST00000454569 ATP5G3P48201 142 aa8.26□□□□□ -1.09
SCN9A-205ENST00000454569 DEFB114Q30KQ6 69 aa8.26□□□□□ -1.09
SCN9A-205ENST00000454569 SOHLH1Q5JUK2 328 aa8.26□□□□□ -1.09
SCN9A-205ENST00000454569 CST9LP1Q5W188 147 aa8.26□□□□□ -1.09
SCN9A-205ENST00000454569 EXOC3-AS1Q8N2X6 119 aa8.26□□□□□ -1.09
SCN9A-205ENST00000454569 SVBPQ8N300 66 aa8.26□□□□□ -1.09
SCN9A-205ENST00000454569 FAM24BQ8N5W8 94 aa8.26□□□□□ -1.09
SCN9A-205ENST00000454569 CYB561D1Q8N8Q1 229 aa8.26□□□□□ -1.09
SCN9A-205ENST00000454569 PEMTQ9UBM1 199 aa8.26□□□□□ -1.09
SCN9A-205ENST00000454569 DNHD1Q96M86 4753 aa8.25□□□□□ -1.09
SCN9A-205ENST00000454569 A0A1W2PS18 150 aa8.25□□□□□ -1.09
SCN9A-205ENST00000454569 FAM74A7A6NL05 159 aa8.25□□□□□ -1.09
SCN9A-205ENST00000454569 ZNF785A8K8V0 405 aa8.25□□□□□ -1.09
SCN9A-205ENST00000454569 GGTLC3B5MD39 225 aa8.25□□□□□ -1.09
SCN9A-205ENST00000454569 C11orf94C9JXX5 98 aa8.25□□□□□ -1.09
SCN9A-205ENST00000454569 RPL7P18124 248 aaKnown RBP8.25□□□□□ -1.09
SCN9A-205ENST00000454569 DEFB1P60022 68 aa8.25□□□□□ -1.09
SCN9A-205ENST00000454569 CD81P60033 236 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms