RNA–Protein interactions for RNA: ENST00000454018.6

SYNE1-214, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 1,546 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-214ENST00000454018 M6PRP20645 277 aa6.58□□□□□ -1.36
SYNE1-214ENST00000454018 GALR1P47211 349 aa6.58□□□□□ -1.36
SYNE1-214ENST00000454018 PAFAH1B2P68402 229 aa6.58□□□□□ -1.36
SYNE1-214ENST00000454018 BEAN1Q3B7T3 259 aa6.58□□□□□ -1.36
SYNE1-214ENST00000454018 GCSAMLQ5JQS6 135 aa6.58□□□□□ -1.36
SYNE1-214ENST00000454018 SAMD13Q5VXD3 122 aa6.58□□□□□ -1.36
SYNE1-214ENST00000454018 SH3BGRL3Q9H299 93 aa6.58□□□□□ -1.36
SYNE1-214ENST00000454018 IZUMO1RA6ND01 250 aa6.57□□□□□ -1.36
SYNE1-214ENST00000454018 OR4C46A6NHA9 309 aa6.57□□□□□ -1.36
SYNE1-214ENST00000454018 SPP1P10451 314 aa6.57□□□□□ -1.36
SYNE1-214ENST00000454018 GP9P14770 177 aa6.57□□□□□ -1.36
SYNE1-214ENST00000454018 MEOX2P50222 304 aa6.57□□□□□ -1.36
SYNE1-214ENST00000454018 RHOBP62745 196 aa6.57□□□□□ -1.36
SYNE1-214ENST00000454018 GUCA2BQ16661 112 aa6.57□□□□□ -1.36
SYNE1-214ENST00000454018 FAM78BQ5VT40 261 aa6.57□□□□□ -1.36
SYNE1-214ENST00000454018 LEMD1Q68G75 181 aa6.57□□□□□ -1.36
SYNE1-214ENST00000454018 GTSCR1Q86UQ5 136 aa6.57□□□□□ -1.36
SYNE1-214ENST00000454018 SLC51BQ86UW2 128 aa6.57□□□□□ -1.36
SYNE1-214ENST00000454018 BPIFA4PQ86YQ2 179 aa6.57□□□□□ -1.36
SYNE1-214ENST00000454018 BAP18Q8IXM2 172 aa6.57□□□□□ -1.36
SYNE1-214ENST00000454018 STXBP6Q8NFX7 210 aa6.57□□□□□ -1.36
SYNE1-214ENST00000454018 NRN1Q9NPD7 142 aa6.57□□□□□ -1.36
SYNE1-214ENST00000454018 FUT9Q9Y231 359 aa6.57□□□□□ -1.36
SYNE1-214ENST00000454018 AGRNO00468 2067 aa6.57□□□□□ -1.36
SYNE1-214ENST00000454018 A8MZ25 164 aa6.56□□□□□ -1.36
SYNE1-214ENST00000454018 PAGE4O60829 102 aa6.56□□□□□ -1.36
SYNE1-214ENST00000454018 SEC11BP0C7V7 166 aa6.56□□□□□ -1.36
SYNE1-214ENST00000454018 NKX2-5P52952 324 aaPredicted RBP6.56□□□□□ -1.36
SYNE1-214ENST00000454018 TAS2R45P59539 299 aa6.56□□□□□ -1.36
SYNE1-214ENST00000454018 RAB2AP61019 212 aa6.56□□□□□ -1.36
SYNE1-214ENST00000454018 KHDC3LQ587J8 217 aa6.56□□□□□ -1.36
SYNE1-214ENST00000454018 TMEM41BQ5BJD5 291 aa6.56□□□□□ -1.36
SYNE1-214ENST00000454018 AKR1C8PQ5T2L2 129 aa6.56□□□□□ -1.36
SYNE1-214ENST00000454018 MORN5Q5VZ52 161 aa6.56□□□□□ -1.36
SYNE1-214ENST00000454018 EIF5AL1Q6IS14 154 aaKnown RBP6.56□□□□□ -1.36
SYNE1-214ENST00000454018 C2CD4CQ8TF44 421 aa6.56□□□□□ -1.36
SYNE1-214ENST00000454018 PRR25Q96S07 402 aa6.56□□□□□ -1.36
SYNE1-214ENST00000454018 MS4A6AQ9H2W1 248 aa6.56□□□□□ -1.36
SYNE1-214ENST00000454018 RFNGQ9Y644 331 aa6.56□□□□□ -1.36
SYNE1-214ENST00000454018 SELENOKQ9Y6D0 94 aa6.56□□□□□ -1.36
SYNE1-214ENST00000454018 IGKV3-7A0A075B6H7 116 aa6.55□□□□□ -1.36
SYNE1-214ENST00000454018 A0A087X0K7 114 aa6.55□□□□□ -1.36
SYNE1-214ENST00000454018 A0A1W2PPV4 95 aa6.55□□□□□ -1.36
SYNE1-214ENST00000454018 UMAD1C9J7I0 102 aa6.55□□□□□ -1.36
SYNE1-214ENST00000454018 DNASE2O00115 360 aaPredicted RBP6.55□□□□□ -1.36
SYNE1-214ENST00000454018 CDC34P49427 236 aaPredicted RBP6.55□□□□□ -1.36
SYNE1-214ENST00000454018 KRTAP10-11P60412 298 aa6.55□□□□□ -1.36
SYNE1-214ENST00000454018 OR10G4Q8NGN3 311 aa6.55□□□□□ -1.36
SYNE1-214ENST00000454018 OR10G9Q8NGN4 311 aa6.55□□□□□ -1.36
SYNE1-214ENST00000454018 OR10G7Q8NGN6 311 aa6.55□□□□□ -1.36
SYNE1-214ENST00000454018 DCANP1Q8TF63 244 aa6.55□□□□□ -1.36
SYNE1-214ENST00000454018 FAM110AQ9BQ89 295 aa6.55□□□□□ -1.36
SYNE1-214ENST00000454018 TMEM14CQ9P0S9 112 aa6.55□□□□□ -1.36
SYNE1-214ENST00000454018 BOLA2-SMG1P6H3BVE0 249 aa6.55□□□□□ -1.36
SYNE1-214ENST00000454018 K7EQG2 157 aa6.55□□□□□ -1.36
SYNE1-214ENST00000454018 MRPS12O15235 138 aaKnown RBP6.55□□□□□ -1.36
SYNE1-214ENST00000454018 CD81P60033 236 aa6.55□□□□□ -1.36
SYNE1-214ENST00000454018 SPATA31B1PQ5VZV4 182 aa6.55□□□□□ -1.36
SYNE1-214ENST00000454018 FAM122CQ6P4D5 195 aa6.55□□□□□ -1.36
SYNE1-214ENST00000454018 LCN15Q6UWW0 184 aa6.55□□□□□ -1.36
SYNE1-214ENST00000454018 PQLC2Q6ZP29 291 aa6.55□□□□□ -1.36
SYNE1-214ENST00000454018 MIR17HGQ75NE6 70 aa6.55□□□□□ -1.36
SYNE1-214ENST00000454018 GBGT1Q8N5D6 347 aa6.55□□□□□ -1.36
SYNE1-214ENST00000454018 SLC25A2Q9BXI2 301 aa6.55□□□□□ -1.36
SYNE1-214ENST00000454018 RPRMQ9NS64 109 aa6.55□□□□□ -1.36
SYNE1-214ENST00000454018 DIRC3C9JPN6 131 aa6.54□□□□□ -1.36
SYNE1-214ENST00000454018 ISLRO14498 428 aa6.54□□□□□ -1.36
SYNE1-214ENST00000454018 SOCS3O14543 225 aa6.54□□□□□ -1.36
SYNE1-214ENST00000454018 OR7C2O60412 319 aa6.54□□□□□ -1.36
SYNE1-214ENST00000454018 IGLC2P0DOY2 106 aa6.54□□□□□ -1.36
SYNE1-214ENST00000454018 TFPI2P48307 235 aa6.54□□□□□ -1.36
SYNE1-214ENST00000454018 PSMB3P49720 205 aa6.54□□□□□ -1.36
SYNE1-214ENST00000454018 CMC4P56277 68 aaPredicted RBP6.54□□□□□ -1.36
SYNE1-214ENST00000454018 SNRPD3P62318 126 aaKnown RBP6.54□□□□□ -1.36
SYNE1-214ENST00000454018 GUK1Q16774 197 aa6.54□□□□□ -1.36
SYNE1-214ENST00000454018 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.54□□□□□ -1.36
SYNE1-214ENST00000454018 DPPA3Q6W0C5 159 aa6.54□□□□□ -1.36
SYNE1-214ENST00000454018 RPP25LQ8N5L8 163 aaKnown RBP6.54□□□□□ -1.36
SYNE1-214ENST00000454018 TMED6Q8WW62 240 aa6.54□□□□□ -1.36
SYNE1-214ENST00000454018 PHYHIPLQ96FC7 376 aa6.54□□□□□ -1.36
SYNE1-214ENST00000454018 FAM167A-AS1Q96KT0 104 aa6.54□□□□□ -1.36
SYNE1-214ENST00000454018 SLC50A1Q9BRV3 221 aa6.54□□□□□ -1.36
SYNE1-214ENST00000454018 ACTR3CQ9C0K3 210 aaPredicted RBP6.54□□□□□ -1.36
SYNE1-214ENST00000454018 HRH4Q9H3N8 390 aa6.54□□□□□ -1.36
SYNE1-214ENST00000454018 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.54□□□□□ -1.36
SYNE1-214ENST00000454018 TRAV5A0A0B4J249 113 aa6.53□□□□□ -1.36
SYNE1-214ENST00000454018 CTXND1A0A1B0GTU2 59 aa6.53□□□□□ -1.36
SYNE1-214ENST00000454018 OR11H12B2RN74 326 aa6.53□□□□□ -1.36
SYNE1-214ENST00000454018 ZNF253O75346 499 aa6.53□□□□□ -1.36
SYNE1-214ENST00000454018 CD7P09564 240 aa6.53□□□□□ -1.36
SYNE1-214ENST00000454018 HIST1H1EP10412 219 aaKnown RBP6.53□□□□□ -1.36
SYNE1-214ENST00000454018 ID1P41134 155 aa6.53□□□□□ -1.36
SYNE1-214ENST00000454018 RAB5CP51148 216 aa6.53□□□□□ -1.36
SYNE1-214ENST00000454018 UBE2L3P68036 154 aaKnown RBP6.53□□□□□ -1.36
SYNE1-214ENST00000454018 PDE6HQ13956 83 aa6.53□□□□□ -1.36
SYNE1-214ENST00000454018 ODF3L2Q3SX64 289 aa6.53□□□□□ -1.36
SYNE1-214ENST00000454018 SAT2Q96F10 170 aaPredicted RBP6.53□□□□□ -1.36
SYNE1-214ENST00000454018 PAXXQ9BUH6 204 aa6.53□□□□□ -1.36
SYNE1-214ENST00000454018 OR51M1Q9H341 326 aa6.53□□□□□ -1.36
SYNE1-214ENST00000454018 MAP6D1Q9H9H5 199 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms