RNA–Protein interactions for RNA: ENST00000453954.6

TCF3-204, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 3,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-204ENST00000453954 ATP5L2Q7Z4Y8 100 aa13.82□□□□□ -0.2
TCF3-204ENST00000453954 TMEM160Q9NX00 188 aa13.82□□□□□ -0.2
TCF3-204ENST00000453954 CHD8Q9HCK8 2581 aa13.82□□□□□ -0.2
TCF3-204ENST00000453954 ZNF474Q6S9Z5 364 aaPredicted RBP13.82□□□□□ -0.2
TCF3-204ENST00000453954 FAM231DQ6ZW35 169 aa13.82□□□□□ -0.2
TCF3-204ENST00000453954 Q86TA4 180 aa13.82□□□□□ -0.2
TCF3-204ENST00000453954 FMC1Q96HJ9 113 aa13.82□□□□□ -0.2
TCF3-204ENST00000453954 DKK2Q9UBU2 259 aa13.82□□□□□ -0.2
TCF3-204ENST00000453954 SLC25A15Q9Y619 301 aa13.82□□□□□ -0.2
TCF3-204ENST00000453954 TMEM238C9JI98 176 aa13.82□□□□□ -0.2
TCF3-204ENST00000453954 GTSCR1Q86UQ5 136 aa13.82□□□□□ -0.2
TCF3-204ENST00000453954 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.82□□□□□ -0.2
TCF3-204ENST00000453954 COLQQ9Y215 455 aaPredicted RBP13.82□□□□□ -0.2
TCF3-204ENST00000453954 IGKV1D-37A0A075B6S9 117 aa13.81□□□□□ -0.2
TCF3-204ENST00000453954 RPEQ96AT9 228 aa13.81□□□□□ -0.2
TCF3-204ENST00000453954 SMIM12Q96EX1 92 aa13.81□□□□□ -0.2
TCF3-204ENST00000453954 HIF1ANQ9NWT6 349 aa13.81□□□□□ -0.2
TCF3-204ENST00000453954 PSG8Q9UQ74 426 aa13.81□□□□□ -0.2
TCF3-204ENST00000453954 PPIAL4EA0A075B759 164 aa13.81□□□□□ -0.2
TCF3-204ENST00000453954 PPIAL4FP0DN26 164 aa13.81□□□□□ -0.2
TCF3-204ENST00000453954 ZADH2Q8N4Q0 377 aa13.81□□□□□ -0.2
TCF3-204ENST00000453954 JMJD8Q96S16 334 aa13.81□□□□□ -0.2
TCF3-204ENST00000453954 RASL11AQ6T310 242 aa13.81□□□□□ -0.2
TCF3-204ENST00000453954 SORL1Q92673 2214 aa13.81□□□□□ -0.2
TCF3-204ENST00000453954 WIPF2Q8TF74 440 aaPredicted RBP13.8□□□□□ -0.2
TCF3-204ENST00000453954 NEU4Q8WWR8 484 aaPredicted RBP13.8□□□□□ -0.2
TCF3-204ENST00000453954 ZNF747Q9BV97 191 aa13.8□□□□□ -0.2
TCF3-204ENST00000453954 SLC25A39Q9BZJ4 359 aaPredicted RBP13.8□□□□□ -0.2
TCF3-204ENST00000453954 AAMDCQ9H7C9 122 aa13.8□□□□□ -0.2
TCF3-204ENST00000453954 ONECUT1Q9UBC0 465 aa13.8□□□□□ -0.2
TCF3-204ENST00000453954 PCSK5Q92824 1860 aa13.8□□□□□ -0.2
TCF3-204ENST00000453954 NCBP2LA6PVI3 153 aaKnown RBP13.8□□□□□ -0.2
TCF3-204ENST00000453954 M0R296 226 aa13.8□□□□□ -0.2
TCF3-204ENST00000453954 COX8AP10176 69 aa13.8□□□□□ -0.2
TCF3-204ENST00000453954 TMEM186Q96B77 213 aa13.8□□□□□ -0.2
TCF3-204ENST00000453954 JKAMPQ9P055 326 aa13.8□□□□□ -0.2
TCF3-204ENST00000453954 MUC6Q6W4X9 2439 aa13.8□□□□□ -0.2
TCF3-204ENST00000453954 OR5AN1Q8NGI8 311 aa13.8□□□□□ -0.2
TCF3-204ENST00000453954 TGFAP01135 160 aa13.79□□□□□ -0.2
TCF3-204ENST00000453954 BCL6BQ8N143 479 aaPredicted RBP13.79□□□□□ -0.2
TCF3-204ENST00000453954 A0A1B0GXF2 115 aa13.79□□□□□ -0.2
TCF3-204ENST00000453954 AMTNQ6UX39 209 aa13.79□□□□□ -0.2
TCF3-204ENST00000453954 TMEM108Q6UXF1 575 aa13.79□□□□□ -0.2
TCF3-204ENST00000453954 ZNF788Q6ZQV5 615 aa13.78□□□□□ -0.2
TCF3-204ENST00000453954 IFI27L1Q96BM0 104 aa13.78□□□□□ -0.2
TCF3-204ENST00000453954 IGLC1P0CG04 106 aa13.78□□□□□ -0.2
TCF3-204ENST00000453954 PSG3Q16557 428 aa13.78□□□□□ -0.2
TCF3-204ENST00000453954 FOXC2Q99958 501 aa13.78□□□□□ -0.2
TCF3-204ENST00000453954 SIGLEC8Q9NYZ4 499 aa13.78□□□□□ -0.2
TCF3-204ENST00000453954 LRBAP50851 2863 aa13.78□□□□□ -0.2
TCF3-204ENST00000453954 UBALD2Q8IYN6 164 aa13.78□□□□□ -0.2
TCF3-204ENST00000453954 SPRY2O43597 315 aa13.77□□□□□ -0.2
TCF3-204ENST00000453954 LINC00312Q9Y6C7 94 aa13.77□□□□□ -0.2
TCF3-204ENST00000453954 FAM208BQ5VWN6 2430 aa13.77□□□□□ -0.2
TCF3-204ENST00000453954 ARL3P36405 182 aa13.77□□□□□ -0.21
TCF3-204ENST00000453954 FAM71F2Q6NXP2 309 aa13.77□□□□□ -0.21
TCF3-204ENST00000453954 MSRB1Q9NZV6 116 aa13.77□□□□□ -0.21
TCF3-204ENST00000453954 GATA1P15976 413 aaPredicted RBP13.77□□□□□ -0.21
TCF3-204ENST00000453954 SAMD5Q5TGI4 173 aa13.77□□□□□ -0.21
TCF3-204ENST00000453954 FAM169BQ8N8A8 192 aa13.77□□□□□ -0.21
TCF3-204ENST00000453954 TMEM265A0A087WTH1 108 aa13.76□□□□□ -0.21
TCF3-204ENST00000453954 CD40P25942 277 aa13.76□□□□□ -0.21
TCF3-204ENST00000453954 SAMD13Q5VXD3 122 aa13.76□□□□□ -0.21
TCF3-204ENST00000453954 CLEC2AQ6UVW9 174 aa13.76□□□□□ -0.21
TCF3-204ENST00000453954 TMEM167AQ8TBQ9 72 aa13.76□□□□□ -0.21
TCF3-204ENST00000453954 IGKV3-7A0A075B6H7 116 aa13.76□□□□□ -0.21
TCF3-204ENST00000453954 PPIAL4CA0A0B4J2A2 164 aa13.76□□□□□ -0.21
TCF3-204ENST00000453954 PPIAL4GP0DN37 164 aa13.76□□□□□ -0.21
TCF3-204ENST00000453954 ORMDL3Q8N138 153 aa13.76□□□□□ -0.21
TCF3-204ENST00000453954 C8orf46Q8TAG6 207 aa13.76□□□□□ -0.21
TCF3-204ENST00000453954 MS4A6AQ9H2W1 248 aa13.76□□□□□ -0.21
TCF3-204ENST00000453954 FNDC10F2Z333 226 aa13.76□□□□□ -0.21
TCF3-204ENST00000453954 LY6HO94772 140 aa13.76□□□□□ -0.21
TCF3-204ENST00000453954 HLA-DMBP28068 263 aa13.76□□□□□ -0.21
TCF3-204ENST00000453954 LEPP41159 167 aa13.76□□□□□ -0.21
TCF3-204ENST00000453954 PAX2Q02962 417 aa13.76□□□□□ -0.21
TCF3-204ENST00000453954 SCNM1Q9BWG6 230 aa13.76□□□□□ -0.21
TCF3-204ENST00000453954 AGRNO00468 2067 aa13.75□□□□□ -0.21
TCF3-204ENST00000453954 SPENQ96T58 3664 aaKnown RBP13.75□□□□□ -0.21
TCF3-204ENST00000453954 PTPRQQ9UMZ3 2332 aa13.75□□□□□ -0.21
TCF3-204ENST00000453954 SMIM13P0DJ93 91 aa13.75□□□□□ -0.21
TCF3-204ENST00000453954 CGB3P0DN86 165 aa13.75□□□□□ -0.21
TCF3-204ENST00000453954 CGB7P0DN87 165 aa13.75□□□□□ -0.21
TCF3-204ENST00000453954 C2orf91Q6ZV80 131 aa13.75□□□□□ -0.21
TCF3-204ENST00000453954 NGBQ9NPG2 151 aa13.75□□□□□ -0.21
TCF3-204ENST00000453954 PLSCR4Q9NRQ2 329 aa13.75□□□□□ -0.21
TCF3-204ENST00000453954 TEX48A0A1B0GUV7 120 aa13.75□□□□□ -0.21
TCF3-204ENST00000453954 PSMB11A5LHX3 300 aa13.74□□□□□ -0.21
TCF3-204ENST00000453954 NDUFA3O95167 84 aa13.74□□□□□ -0.21
TCF3-204ENST00000453954 NPYP01303 97 aa13.74□□□□□ -0.21
TCF3-204ENST00000453954 LTAP01374 205 aa13.74□□□□□ -0.21
TCF3-204ENST00000453954 SEC11AP67812 179 aa13.74□□□□□ -0.21
TCF3-204ENST00000453954 OTORQ9NRC9 128 aa13.74□□□□□ -0.21
TCF3-204ENST00000453954 C9orf118A6NHY6 69 aa13.74□□□□□ -0.21
TCF3-204ENST00000453954 ZNF785A8K8V0 405 aa13.74□□□□□ -0.21
TCF3-204ENST00000453954 SMAD7O15105 426 aaKnown RBP13.74□□□□□ -0.21
TCF3-204ENST00000453954 TLN2Q9Y4G6 2542 aa13.74□□□□□ -0.21
TCF3-204ENST00000453954 ASH1LQ9NR48 2969 aaKnown RBP13.73□□□□□ -0.21
TCF3-204ENST00000453954 NDFIP1Q9BT67 221 aa13.73□□□□□ -0.21
TCF3-204ENST00000453954 PPP1R27Q86WC6 154 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms