RNA–Protein interactions for RNA: ENST00000453056.5

VPS8-213, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-213ENST00000453056 DEFB1P60022 68 aa11.31□□□□□ -0.6
VPS8-213ENST00000453056 PSG9Q00887 426 aa11.31□□□□□ -0.6
VPS8-213ENST00000453056 GUK1Q16774 197 aa11.31□□□□□ -0.6
VPS8-213ENST00000453056 FAM78BQ5VT40 261 aa11.31□□□□□ -0.6
VPS8-213ENST00000453056 MORN5Q5VZ52 161 aa11.31□□□□□ -0.6
VPS8-213ENST00000453056 RNF182Q8N6D2 247 aa11.31□□□□□ -0.6
VPS8-213ENST00000453056 C11orf68Q9H3H3 251 aaKnown RBP11.31□□□□□ -0.6
VPS8-213ENST00000453056 HRH4Q9H3N8 390 aa11.31□□□□□ -0.6
VPS8-213ENST00000453056 CLEC5AQ9NY25 188 aa11.31□□□□□ -0.6
VPS8-213ENST00000453056 XCL2Q9UBD3 114 aa11.31□□□□□ -0.6
VPS8-213ENST00000453056 F6UB75 175 aa11.3□□□□□ -0.6
VPS8-213ENST00000453056 IGLC2P0DOY2 106 aa11.3□□□□□ -0.6
VPS8-213ENST00000453056 IGFL4Q6B9Z1 124 aa11.3□□□□□ -0.6
VPS8-213ENST00000453056 MRPL32Q9BYC8 188 aaKnown RBP11.3□□□□□ -0.6
VPS8-213ENST00000453056 KMT2CQ8NEZ4 4911 aaKnown RBP11.3□□□□□ -0.6
VPS8-213ENST00000453056 MIFP14174 115 aa11.29□□□□□ -0.6
VPS8-213ENST00000453056 ZNF266Q14584 549 aa11.29□□□□□ -0.6
VPS8-213ENST00000453056 PSG3Q16557 428 aa11.29□□□□□ -0.6
VPS8-213ENST00000453056 PARD6GQ9BYG4 376 aaPredicted RBP11.29□□□□□ -0.6
VPS8-213ENST00000453056 ZNF331Q9NQX6 463 aaPredicted RBP11.29□□□□□ -0.6
VPS8-213ENST00000453056 TMEM14CQ9P0S9 112 aa11.29□□□□□ -0.6
VPS8-213ENST00000453056 TRAV5A0A0B4J249 113 aa11.28□□□□□ -0.6
VPS8-213ENST00000453056 CXorf65A6NEN9 183 aa11.28□□□□□ -0.6
VPS8-213ENST00000453056 ZNF705EA8MWA4 302 aaPredicted RBP11.28□□□□□ -0.6
VPS8-213ENST00000453056 ZNF253O75346 499 aa11.28□□□□□ -0.6
VPS8-213ENST00000453056 AMBPP02760 352 aa11.28□□□□□ -0.6
VPS8-213ENST00000453056 CNN1P51911 297 aaKnown RBP11.28□□□□□ -0.6
VPS8-213ENST00000453056 GCSAMLQ5JQS6 135 aa11.28□□□□□ -0.6
VPS8-213ENST00000453056 FFAR4Q5NUL3 377 aa11.28□□□□□ -0.6
VPS8-213ENST00000453056 INO80EQ8NBZ0 244 aaPredicted RBP11.28□□□□□ -0.6
VPS8-213ENST00000453056 OR2T35Q8NGX2 323 aa11.28□□□□□ -0.6
VPS8-213ENST00000453056 AQP10Q96PS8 301 aa11.28□□□□□ -0.6
VPS8-213ENST00000453056 MFFQ9GZY8 342 aa11.28□□□□□ -0.6
VPS8-213ENST00000453056 STARD9Q9P2P6 4700 aa11.28□□□□□ -0.6
VPS8-213ENST00000453056 TENM2Q9NT68 2774 aa11.27□□□□□ -0.61
VPS8-213ENST00000453056 FXYD6-FXYD2A0A087WZ82 144 aa11.27□□□□□ -0.61
VPS8-213ENST00000453056 A8MTW9 85 aa11.27□□□□□ -0.61
VPS8-213ENST00000453056 FXYD7P58549 80 aa11.27□□□□□ -0.61
VPS8-213ENST00000453056 HIST1H1AQ02539 215 aaPredicted RBP11.27□□□□□ -0.61
VPS8-213ENST00000453056 CSNK1G2-AS1Q8NCQ2 148 aa11.27□□□□□ -0.61
VPS8-213ENST00000453056 OR8A1Q8NGG7 326 aa11.27□□□□□ -0.61
VPS8-213ENST00000453056 RPUSD4Q96CM3 377 aaKnown RBP11.27□□□□□ -0.61
VPS8-213ENST00000453056 PPP1R14DQ9NXH3 145 aa11.27□□□□□ -0.61
VPS8-213ENST00000453056 GOLT1BQ9Y3E0 138 aa11.27□□□□□ -0.61
VPS8-213ENST00000453056 CSMD3Q7Z407 3707 aa11.26□□□□□ -0.61
VPS8-213ENST00000453056 H3BQ15 152 aa11.26□□□□□ -0.61
VPS8-213ENST00000453056 H3BTX0 84 aa11.26□□□□□ -0.61
VPS8-213ENST00000453056 SLC17A3O00476 420 aa11.26□□□□□ -0.61
VPS8-213ENST00000453056 SNRPCP09234 159 aaKnown RBP11.26□□□□□ -0.61
VPS8-213ENST00000453056 HIST1H1EP10412 219 aaKnown RBP11.26□□□□□ -0.61
VPS8-213ENST00000453056 HLA-DMBP28068 263 aa11.26□□□□□ -0.61
VPS8-213ENST00000453056 PMS2P11Q13670 270 aa11.26□□□□□ -0.61
VPS8-213ENST00000453056 PDE6HQ13956 83 aa11.26□□□□□ -0.61
VPS8-213ENST00000453056 Q8NAQ8 132 aa11.26□□□□□ -0.61
VPS8-213ENST00000453056 SLC35B3Q9H1N7 401 aa11.26□□□□□ -0.61
VPS8-213ENST00000453056 FUT9Q9Y231 359 aa11.26□□□□□ -0.61
VPS8-213ENST00000453056 TIMM9Q9Y5J7 89 aa11.26□□□□□ -0.61
VPS8-213ENST00000453056 IGHV4-28A0A0C4DH34 117 aa11.25□□□□□ -0.61
VPS8-213ENST00000453056 BOLA2-SMG1P6H3BVE0 249 aa11.25□□□□□ -0.61
VPS8-213ENST00000453056 TAS2R45P59539 299 aa11.25□□□□□ -0.61
VPS8-213ENST00000453056 RHOBP62745 196 aa11.25□□□□□ -0.61
VPS8-213ENST00000453056 MIR17HGQ75NE6 70 aa11.25□□□□□ -0.61
VPS8-213ENST00000453056 OR10J6PQ8NGY7 276 aa11.25□□□□□ -0.61
VPS8-213ENST00000453056 SLC25A2Q9BXI2 301 aa11.25□□□□□ -0.61
VPS8-213ENST00000453056 WFDC1Q9HC57 220 aa11.25□□□□□ -0.61
VPS8-213ENST00000453056 ZNF586Q9NXT0 402 aa11.25□□□□□ -0.61
VPS8-213ENST00000453056 X6R8D5 127 aa11.25□□□□□ -0.61
VPS8-213ENST00000453056 TRBV19A0A075B6N1 114 aa11.24□□□□□ -0.61
VPS8-213ENST00000453056 NUPR2A6NF83 97 aa11.24□□□□□ -0.61
VPS8-213ENST00000453056 DEFB4AO15263 64 aa11.24□□□□□ -0.61
VPS8-213ENST00000453056 OR7C2O60412 319 aa11.24□□□□□ -0.61
VPS8-213ENST00000453056 INSP01308 110 aa11.24□□□□□ -0.61
VPS8-213ENST00000453056 PYYP10082 97 aa11.24□□□□□ -0.61
VPS8-213ENST00000453056 ACOT6Q3I5F7 207 aaPredicted RBP11.24□□□□□ -0.61
VPS8-213ENST00000453056 KHDC3LQ587J8 217 aa11.24□□□□□ -0.61
VPS8-213ENST00000453056 AMTNQ6UX39 209 aa11.24□□□□□ -0.61
VPS8-213ENST00000453056 C11orf45Q8TAV5 145 aa11.24□□□□□ -0.61
VPS8-213ENST00000453056 MRPL53Q96EL3 112 aaKnown RBP11.24□□□□□ -0.61
VPS8-213ENST00000453056 SAT2Q96F10 170 aaPredicted RBP11.24□□□□□ -0.61
VPS8-213ENST00000453056 PAXXQ9BUH6 204 aa11.24□□□□□ -0.61
VPS8-213ENST00000453056 AAMDCQ9H7C9 122 aa11.24□□□□□ -0.61
VPS8-213ENST00000453056 PRELID1Q9Y255 219 aa11.24□□□□□ -0.61
VPS8-213ENST00000453056 IGHV3OR16-12A0A075B7B8 117 aa11.23□□□□□ -0.61
VPS8-213ENST00000453056 SMIM9A6NGZ8 99 aa11.23□□□□□ -0.61
VPS8-213ENST00000453056 ZNF705DP0CH99 300 aaPredicted RBP11.23□□□□□ -0.61
VPS8-213ENST00000453056 ZNF705BP0CI00 300 aaPredicted RBP11.23□□□□□ -0.61
VPS8-213ENST00000453056 SPINK13Q1W4C9 94 aa11.23□□□□□ -0.61
VPS8-213ENST00000453056 Q5BKY6 102 aa11.23□□□□□ -0.61
VPS8-213ENST00000453056 ZNF705AQ6ZN79 300 aaPredicted RBP11.23□□□□□ -0.61
VPS8-213ENST00000453056 BLNKQ8WV28 456 aa11.23□□□□□ -0.61
VPS8-213ENST00000453056 FAM167A-AS1Q96KT0 104 aa11.23□□□□□ -0.61
VPS8-213ENST00000453056 IGF2BP2-AS1Q96M15 143 aa11.23□□□□□ -0.61
VPS8-213ENST00000453056 NEU1Q99519 415 aa11.23□□□□□ -0.61
VPS8-213ENST00000453056 TMEM208Q9BTX3 173 aa11.23□□□□□ -0.61
VPS8-213ENST00000453056 OR51M1Q9H341 326 aa11.23□□□□□ -0.61
VPS8-213ENST00000453056 BORCS7-ASMTA0A0B4J1R7 106 aa11.22□□□□□ -0.61
VPS8-213ENST00000453056 ZNF705FA8MVS1 300 aaPredicted RBP11.22□□□□□ -0.61
VPS8-213ENST00000453056 M0R2Z0 102 aa11.22□□□□□ -0.61
VPS8-213ENST00000453056 M6PRP20645 277 aa11.22□□□□□ -0.61
VPS8-213ENST00000453056 UBE2L3P68036 154 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms