RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 USF2Q15853 346 aaPredicted RBP6.65□□□□□ -1.34
COL8A1-203ENST00000452013 TEPPQ6URK8 271 aa6.65□□□□□ -1.34
COL8A1-203ENST00000452013 C16orf54Q6UWD8 224 aa6.65□□□□□ -1.34
COL8A1-203ENST00000452013 WFDC3Q8IUB2 231 aa6.65□□□□□ -1.34
COL8A1-203ENST00000452013 DEFB125Q8N687 156 aa6.65□□□□□ -1.34
COL8A1-203ENST00000452013 FAM110AQ9BQ89 295 aa6.65□□□□□ -1.34
COL8A1-203ENST00000452013 CTDSP1Q9GZU7 261 aa6.65□□□□□ -1.34
COL8A1-203ENST00000452013 IGKV1OR2-108A0A075B7D4 117 aa6.64□□□□□ -1.35
COL8A1-203ENST00000452013 LOC102723971A0A1B0GUV8 181 aa6.64□□□□□ -1.35
COL8A1-203ENST00000452013 C5orf52A6NGY3 159 aa6.64□□□□□ -1.35
COL8A1-203ENST00000452013 C9JQL5 133 aa6.64□□□□□ -1.35
COL8A1-203ENST00000452013 BUB3O43684 328 aa6.64□□□□□ -1.35
COL8A1-203ENST00000452013 CST7O76096 145 aa6.64□□□□□ -1.35
COL8A1-203ENST00000452013 TFPI2P48307 235 aa6.64□□□□□ -1.35
COL8A1-203ENST00000452013 MEOX2P50222 304 aa6.64□□□□□ -1.35
COL8A1-203ENST00000452013 LYZP61626 148 aa6.64□□□□□ -1.35
COL8A1-203ENST00000452013 SLC38A11Q08AI6 406 aa6.64□□□□□ -1.35
COL8A1-203ENST00000452013 TMEM41BQ5BJD5 291 aa6.64□□□□□ -1.35
COL8A1-203ENST00000452013 C1orf194Q5T5A4 169 aa6.64□□□□□ -1.35
COL8A1-203ENST00000452013 CYP2G1PQ6ZSU1 146 aa6.64□□□□□ -1.35
COL8A1-203ENST00000452013 LILRB2Q8N423 598 aa6.64□□□□□ -1.35
COL8A1-203ENST00000452013 GBGT1Q8N5D6 347 aa6.64□□□□□ -1.35
COL8A1-203ENST00000452013 BTF3L4Q96K17 158 aa6.64□□□□□ -1.35
COL8A1-203ENST00000452013 ASCL2Q99929 193 aa6.64□□□□□ -1.35
COL8A1-203ENST00000452013 TXNDC17Q9BRA2 123 aa6.64□□□□□ -1.35
COL8A1-203ENST00000452013 SH3BGRL3Q9H299 93 aa6.64□□□□□ -1.35
COL8A1-203ENST00000452013 MS4A6AQ9H2W1 248 aa6.64□□□□□ -1.35
COL8A1-203ENST00000452013 ZMAT4Q9H898 229 aa6.64□□□□□ -1.35
COL8A1-203ENST00000452013 SLC45A2Q9UMX9 530 aa6.64□□□□□ -1.35
COL8A1-203ENST00000452013 C17orf112F2Z3M2 114 aa6.63□□□□□ -1.35
COL8A1-203ENST00000452013 TMEM250H0YL14 139 aa6.63□□□□□ -1.35
COL8A1-203ENST00000452013 ORM2P19652 201 aa6.63□□□□□ -1.35
COL8A1-203ENST00000452013 ARL16Q0P5N6 197 aa6.63□□□□□ -1.35
COL8A1-203ENST00000452013 ICAM4Q14773 271 aa6.63□□□□□ -1.35
COL8A1-203ENST00000452013 SBSPONQ8IVN8 264 aa6.63□□□□□ -1.35
COL8A1-203ENST00000452013 TMEM217Q8N7C4 229 aa6.63□□□□□ -1.35
COL8A1-203ENST00000452013 TMEM147Q9BVK8 224 aa6.63□□□□□ -1.35
COL8A1-203ENST00000452013 WDR61Q9GZS3 305 aaKnown RBP6.63□□□□□ -1.35
COL8A1-203ENST00000452013 SRD5A3Q9H8P0 318 aa6.63□□□□□ -1.35
COL8A1-203ENST00000452013 MANBALQ9NQG1 85 aa6.63□□□□□ -1.35
COL8A1-203ENST00000452013 KCNIP2Q9NS61 270 aa6.63□□□□□ -1.35
COL8A1-203ENST00000452013 VAX2Q9UIW0 290 aa6.63□□□□□ -1.35
COL8A1-203ENST00000452013 RNF24Q9Y225 148 aa6.63□□□□□ -1.35
COL8A1-203ENST00000452013 LOC102724200A0A096LPH7 203 aaPredicted RBP6.62□□□□□ -1.35
COL8A1-203ENST00000452013 H3BQ15 152 aa6.62□□□□□ -1.35
COL8A1-203ENST00000452013 MPDU1O75352 247 aa6.62□□□□□ -1.35
COL8A1-203ENST00000452013 HYPMO75409 117 aa6.62□□□□□ -1.35
COL8A1-203ENST00000452013 BCL2P10415 239 aa6.62□□□□□ -1.35
COL8A1-203ENST00000452013 GATA2P23769 480 aaPredicted RBP6.62□□□□□ -1.35
COL8A1-203ENST00000452013 FHITP49789 147 aa6.62□□□□□ -1.35
COL8A1-203ENST00000452013 AKR1D1P51857 326 aa6.62□□□□□ -1.35
COL8A1-203ENST00000452013 PLP1P60201 277 aa6.62□□□□□ -1.35
COL8A1-203ENST00000452013 DNLZQ5SXM8 178 aa6.62□□□□□ -1.35
COL8A1-203ENST00000452013 SIGLEC15Q6ZMC9 328 aa6.62□□□□□ -1.35
COL8A1-203ENST00000452013 LINC00322Q6ZN03 302 aaPredicted RBP6.62□□□□□ -1.35
COL8A1-203ENST00000452013 OR8I2Q8N0Y5 310 aa6.62□□□□□ -1.35
COL8A1-203ENST00000452013 STXBP6Q8NFX7 210 aa6.62□□□□□ -1.35
COL8A1-203ENST00000452013 OR1B1Q8NGR6 318 aa6.62□□□□□ -1.35
COL8A1-203ENST00000452013 GLMPQ8WWB7 406 aa6.62□□□□□ -1.35
COL8A1-203ENST00000452013 C12orf57Q99622 126 aa6.62□□□□□ -1.35
COL8A1-203ENST00000452013 TMPRSS5Q9H3S3 457 aa6.62□□□□□ -1.35
COL8A1-203ENST00000452013 CTXND1A0A1B0GTU2 59 aa6.61□□□□□ -1.35
COL8A1-203ENST00000452013 RBMY1BA6NDE4 496 aaKnown RBP6.61□□□□□ -1.35
COL8A1-203ENST00000452013 RBMY1EA6NEQ0 496 aaKnown RBP6.61□□□□□ -1.35
COL8A1-203ENST00000452013 K7EQG2 157 aa6.61□□□□□ -1.35
COL8A1-203ENST00000452013 OR5G3P0C626 314 aa6.61□□□□□ -1.35
COL8A1-203ENST00000452013 RBMY1DP0C7P1 496 aaKnown RBP6.61□□□□□ -1.35
COL8A1-203ENST00000452013 HAGHQ16775 308 aa6.61□□□□□ -1.35
COL8A1-203ENST00000452013 VWC2Q2TAL6 325 aa6.61□□□□□ -1.35
COL8A1-203ENST00000452013 STPG3Q8N7X2 389 aa6.61□□□□□ -1.35
COL8A1-203ENST00000452013 ZNF709Q8N972 641 aa6.61□□□□□ -1.35
COL8A1-203ENST00000452013 YPEL4Q96NS1 127 aa6.61□□□□□ -1.35
COL8A1-203ENST00000452013 GPR82Q96P67 336 aa6.61□□□□□ -1.35
COL8A1-203ENST00000452013 GGTLC1Q9BX51 225 aa6.61□□□□□ -1.35
COL8A1-203ENST00000452013 ACTR3CQ9C0K3 210 aaPredicted RBP6.61□□□□□ -1.35
COL8A1-203ENST00000452013 SEPSECSQ9HD40 501 aaKnown RBP6.61□□□□□ -1.35
COL8A1-203ENST00000452013 SLC39A9Q9NUM3 307 aa6.61□□□□□ -1.35
COL8A1-203ENST00000452013 HIGD1AQ9Y241 93 aa6.61□□□□□ -1.35
COL8A1-203ENST00000452013 WDR83OSQ9Y284 106 aa6.61□□□□□ -1.35
COL8A1-203ENST00000452013 U3KQK5 164 aa6.61□□□□□ -1.35
COL8A1-203ENST00000452013 NOTCH3Q9UM47 2321 aa6.6□□□□□ -1.35
COL8A1-203ENST00000452013 NOTCH1P46531 2555 aa6.6□□□□□ -1.35
COL8A1-203ENST00000452013 ELOA3CA0A087WX78 387 aaPredicted RBP6.6□□□□□ -1.35
COL8A1-203ENST00000452013 LINC00869P0C866 280 aa6.6□□□□□ -1.35
COL8A1-203ENST00000452013 ID1P41134 155 aa6.6□□□□□ -1.35
COL8A1-203ENST00000452013 GALR1P47211 349 aa6.6□□□□□ -1.35
COL8A1-203ENST00000452013 PSMB3P49720 205 aa6.6□□□□□ -1.35
COL8A1-203ENST00000452013 APOC4P55056 127 aa6.6□□□□□ -1.35
COL8A1-203ENST00000452013 DEFB131AP59861 70 aa6.6□□□□□ -1.35
COL8A1-203ENST00000452013 SNRPD3P62318 126 aaKnown RBP6.6□□□□□ -1.35
COL8A1-203ENST00000452013 ODF3L2Q3SX64 289 aa6.6□□□□□ -1.35
COL8A1-203ENST00000452013 SAMD13Q5VXD3 122 aa6.6□□□□□ -1.35
COL8A1-203ENST00000452013 APRG1Q8IVJ8 170 aa6.6□□□□□ -1.35
COL8A1-203ENST00000452013 OR1L4Q8NGR5 311 aa6.6□□□□□ -1.35
COL8A1-203ENST00000452013 MGST2Q99735 147 aa6.6□□□□□ -1.35
COL8A1-203ENST00000452013 SPATA25Q9BR10 227 aa6.6□□□□□ -1.35
COL8A1-203ENST00000452013 TM2D3Q9BRN9 247 aa6.6□□□□□ -1.35
COL8A1-203ENST00000452013 WFDC10AQ9H1F0 79 aa6.6□□□□□ -1.35
COL8A1-203ENST00000452013 MAP6D1Q9H9H5 199 aa6.6□□□□□ -1.35
COL8A1-203ENST00000452013 NRN1Q9NPD7 142 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms