RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, human

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-209	ENST00000451859		M0R2Z0	102 aa		6.22	□□□□□ -1.41
RFX3-209	ENST00000451859	TSC22D2	O75157	780 aa		6.22	□□□□□ -1.41
RFX3-209	ENST00000451859	CAV2	P51636	162 aa		6.22	□□□□□ -1.41
RFX3-209	ENST00000451859	CNN1	P51911	297 aa	Known RBP	6.22	□□□□□ -1.41
RFX3-209	ENST00000451859	S100A10	P60903	97 aa		6.22	□□□□□ -1.41
RFX3-209	ENST00000451859	ARL16	Q0P5N6	197 aa		6.22	□□□□□ -1.41
RFX3-209	ENST00000451859	SPINK13	Q1W4C9	94 aa		6.22	□□□□□ -1.41
RFX3-209	ENST00000451859	SAMD13	Q5VXD3	122 aa		6.22	□□□□□ -1.41
RFX3-209	ENST00000451859	SPATA31B1P	Q5VZV4	182 aa		6.22	□□□□□ -1.41
RFX3-209	ENST00000451859	TEPP	Q6URK8	271 aa		6.22	□□□□□ -1.41
RFX3-209	ENST00000451859	LRRC20	Q8TCA0	184 aa		6.22	□□□□□ -1.41
RFX3-209	ENST00000451859	GPR82	Q96P67	336 aa		6.22	□□□□□ -1.41
RFX3-209	ENST00000451859	NPVF	Q9HCQ7	196 aa		6.22	□□□□□ -1.41
RFX3-209	ENST00000451859	NDUFA13	Q9P0J0	144 aa		6.22	□□□□□ -1.41
RFX3-209	ENST00000451859	RFNG	Q9Y644	331 aa		6.22	□□□□□ -1.41
RFX3-209	ENST00000451859	TRAV12-2	A0A075B6T6	113 aa		6.21	□□□□□ -1.42
RFX3-209	ENST00000451859	LOC102723971	A0A1B0GUV8	181 aa		6.21	□□□□□ -1.42
RFX3-209	ENST00000451859		H3BTX0	84 aa		6.21	□□□□□ -1.42
RFX3-209	ENST00000451859		K7EPK0	472 aa		6.21	□□□□□ -1.42
RFX3-209	ENST00000451859	GOSR2	O14653	212 aa		6.21	□□□□□ -1.42
RFX3-209	ENST00000451859	AGPAT2	O15120	278 aa		6.21	□□□□□ -1.42
RFX3-209	ENST00000451859	COX7A2P2	O60397	106 aa		6.21	□□□□□ -1.42
RFX3-209	ENST00000451859	EIF4EBP3	O60516	100 aa	Predicted RBP	6.21	□□□□□ -1.42
RFX3-209	ENST00000451859	CST7	O76096	145 aa		6.21	□□□□□ -1.42
RFX3-209	ENST00000451859	HBE1	P02100	147 aa		6.21	□□□□□ -1.42
RFX3-209	ENST00000451859	PRM2	P04554	102 aa		6.21	□□□□□ -1.42
RFX3-209	ENST00000451859	SPART-AS1	P0CW21	52 aa		6.21	□□□□□ -1.42
RFX3-209	ENST00000451859	RPL7	P18124	248 aa	Known RBP	6.21	□□□□□ -1.42
RFX3-209	ENST00000451859	TCTA	P57738	103 aa		6.21	□□□□□ -1.42
RFX3-209	ENST00000451859	TAS2R30	P59541	319 aa		6.21	□□□□□ -1.42
RFX3-209	ENST00000451859	SELENOT	P62341	195 aa		6.21	□□□□□ -1.42
RFX3-209	ENST00000451859	RHOB	P62745	196 aa		6.21	□□□□□ -1.42
RFX3-209	ENST00000451859	HIST1H1A	Q02539	215 aa	Predicted RBP	6.21	□□□□□ -1.42
RFX3-209	ENST00000451859	CNPY1	Q3B7I2	92 aa		6.21	□□□□□ -1.42
RFX3-209	ENST00000451859	FAM222A	Q5U5X8	452 aa		6.21	□□□□□ -1.42
RFX3-209	ENST00000451859	PATE2	Q6UY27	113 aa		6.21	□□□□□ -1.42
RFX3-209	ENST00000451859	ZNF546	Q86UE3	836 aa		6.21	□□□□□ -1.42
RFX3-209	ENST00000451859	BAP18	Q8IXM2	172 aa		6.21	□□□□□ -1.42
RFX3-209	ENST00000451859	C1orf158	Q8N1D5	194 aa		6.21	□□□□□ -1.42
RFX3-209	ENST00000451859	C12orf45	Q8N5I9	185 aa	Predicted RBP	6.21	□□□□□ -1.42
RFX3-209	ENST00000451859	OR11H7	Q8NGC8	314 aa		6.21	□□□□□ -1.42
RFX3-209	ENST00000451859	ZNF431	Q8TF32	576 aa	Predicted RBP	6.21	□□□□□ -1.42
RFX3-209	ENST00000451859	ARV1	Q9H2C2	271 aa		6.21	□□□□□ -1.42
RFX3-209	ENST00000451859	UBE2L5P	A0A1B0GUS4	154 aa		6.2	□□□□□ -1.42
RFX3-209	ENST00000451859	FAM240B	A0A1B0GVZ2	78 aa		6.2	□□□□□ -1.42
RFX3-209	ENST00000451859	TMEM189	A5PLL7	270 aa		6.2	□□□□□ -1.42
RFX3-209	ENST00000451859	FAM24A	A6NFZ4	105 aa		6.2	□□□□□ -1.42
RFX3-209	ENST00000451859	SMIM9	A6NGZ8	99 aa		6.2	□□□□□ -1.42
RFX3-209	ENST00000451859	DUSP14	O95147	198 aa	Known RBP	6.2	□□□□□ -1.42
RFX3-209	ENST00000451859	INS	P01308	110 aa		6.2	□□□□□ -1.42
RFX3-209	ENST00000451859	RRN3P1	Q2M238	152 aa		6.2	□□□□□ -1.42
RFX3-209	ENST00000451859	LINC00305	Q7Z4B0	112 aa		6.2	□□□□□ -1.42
RFX3-209	ENST00000451859	IGF2BP2-AS1	Q96M15	143 aa		6.2	□□□□□ -1.42
RFX3-209	ENST00000451859	CLUHP3	Q96NS8	147 aa		6.2	□□□□□ -1.42
RFX3-209	ENST00000451859	NEU1	Q99519	415 aa		6.2	□□□□□ -1.42
RFX3-209	ENST00000451859	MGST2	Q99735	147 aa		6.2	□□□□□ -1.42
RFX3-209	ENST00000451859	CCDC32	Q9BV29	185 aa		6.2	□□□□□ -1.42
RFX3-209	ENST00000451859	RNF126	Q9BV68	326 aa		6.2	□□□□□ -1.42
RFX3-209	ENST00000451859	PPP1R14D	Q9NXH3	145 aa		6.2	□□□□□ -1.42
RFX3-209	ENST00000451859	DKK2	Q9UBU2	259 aa		6.2	□□□□□ -1.42
RFX3-209	ENST00000451859	YTHDF2	Q9Y5A9	579 aa	Known RBP	6.2	□□□□□ -1.42
RFX3-209	ENST00000451859		A0A087X0K7	114 aa		6.19	□□□□□ -1.42
RFX3-209	ENST00000451859	ZNF705G	A8MUZ8	300 aa	Predicted RBP	6.19	□□□□□ -1.42
RFX3-209	ENST00000451859	AMBP	P02760	352 aa		6.19	□□□□□ -1.42
RFX3-209	ENST00000451859	HTN1	P15515	57 aa		6.19	□□□□□ -1.42
RFX3-209	ENST00000451859	CXCL3	P19876	107 aa		6.19	□□□□□ -1.42
RFX3-209	ENST00000451859	PVALB	P20472	110 aa	Predicted RBP	6.19	□□□□□ -1.42
RFX3-209	ENST00000451859	CAMLG	P49069	296 aa		6.19	□□□□□ -1.42
RFX3-209	ENST00000451859	PLP1	P60201	277 aa		6.19	□□□□□ -1.42
RFX3-209	ENST00000451859	BAX	Q07812	192 aa		6.19	□□□□□ -1.42
RFX3-209	ENST00000451859	MORN5	Q5VZ52	161 aa		6.19	□□□□□ -1.42
RFX3-209	ENST00000451859	MZT2B	Q6NZ67	158 aa		6.19	□□□□□ -1.42
RFX3-209	ENST00000451859	AMTN	Q6UX39	209 aa		6.19	□□□□□ -1.42
RFX3-209	ENST00000451859	S100A7A	Q86SG5	101 aa		6.19	□□□□□ -1.42
RFX3-209	ENST00000451859	C2orf50	Q96LR7	162 aa		6.19	□□□□□ -1.42
RFX3-209	ENST00000451859	NIPSNAP3B	Q9BS92	247 aa		6.19	□□□□□ -1.42
RFX3-209	ENST00000451859	NDUFAF3	Q9BU61	184 aa		6.19	□□□□□ -1.42
RFX3-209	ENST00000451859	HECTD4	Q9Y4D8	3996 aa		6.18	□□□□□ -1.42
RFX3-209	ENST00000451859	IGSF23	A1L1A6	192 aa		6.18	□□□□□ -1.42
RFX3-209	ENST00000451859	FNDC10	F2Z333	226 aa		6.18	□□□□□ -1.42
RFX3-209	ENST00000451859	BOLA2-SMG1P6	H3BVE0	249 aa		6.18	□□□□□ -1.42
RFX3-209	ENST00000451859	DAD1	P61803	113 aa		6.18	□□□□□ -1.42
RFX3-209	ENST00000451859	RAB32	Q13637	225 aa		6.18	□□□□□ -1.42
RFX3-209	ENST00000451859	OPCML	Q14982	345 aa		6.18	□□□□□ -1.42
RFX3-209	ENST00000451859	PSG3	Q16557	428 aa		6.18	□□□□□ -1.42
RFX3-209	ENST00000451859	C10orf113	Q5VZT2	155 aa		6.18	□□□□□ -1.42
RFX3-209	ENST00000451859	MIC13	Q5XKP0	118 aa		6.18	□□□□□ -1.42
RFX3-209	ENST00000451859	NRARP	Q7Z6K4	114 aa		6.18	□□□□□ -1.42
RFX3-209	ENST00000451859	UBE2DNL	Q8IWF7	75 aa		6.18	□□□□□ -1.42
RFX3-209	ENST00000451859	OR8A1	Q8NGG7	326 aa		6.18	□□□□□ -1.42
RFX3-209	ENST00000451859	ENKUR	Q8TC29	256 aa		6.18	□□□□□ -1.42
RFX3-209	ENST00000451859	RPUSD4	Q96CM3	377 aa	Known RBP	6.18	□□□□□ -1.42
RFX3-209	ENST00000451859	GGACT	Q9BVM4	153 aa		6.18	□□□□□ -1.42
RFX3-209	ENST00000451859	PARD6G	Q9BYG4	376 aa	Predicted RBP	6.18	□□□□□ -1.42
RFX3-209	ENST00000451859	KRTAP9-8	Q9BYQ0	159 aa		6.18	□□□□□ -1.42
RFX3-209	ENST00000451859	UQCC1	Q9NVA1	299 aa		6.18	□□□□□ -1.42
RFX3-209	ENST00000451859	DNAH2	Q9P225	4427 aa		6.17	□□□□□ -1.42
RFX3-209	ENST00000451859	TRAV5	A0A0B4J249	113 aa		6.17	□□□□□ -1.42
RFX3-209	ENST00000451859		A8MTW9	85 aa		6.17	□□□□□ -1.42
RFX3-209	ENST00000451859		J3KRW8	73 aa		6.17	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms