RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 YAE1D1Q9NRH1 226 aa6.87□□□□□ -1.31
LSM5-208ENST00000450169 SIT1Q9Y3P8 196 aa6.87□□□□□ -1.31
LSM5-208ENST00000450169 U3KQK5 164 aa6.87□□□□□ -1.31
LSM5-208ENST00000450169 A0A087WX48 190 aa6.87□□□□□ -1.31
LSM5-208ENST00000450169 RNASE2P10153 161 aaKnown RBP6.87□□□□□ -1.31
LSM5-208ENST00000450169 CD27P26842 260 aa6.87□□□□□ -1.31
LSM5-208ENST00000450169 ZNF493Q6ZR52 646 aa6.87□□□□□ -1.31
LSM5-208ENST00000450169 TEN1Q86WV5 123 aa6.87□□□□□ -1.31
LSM5-208ENST00000450169 FAM90A1Q86YD7 464 aa6.87□□□□□ -1.31
LSM5-208ENST00000450169 X6R8D5 127 aa6.87□□□□□ -1.31
LSM5-208ENST00000450169 PCSK5Q92824 1860 aa6.86□□□□□ -1.31
LSM5-208ENST00000450169 ASXL3Q9C0F0 2248 aa6.86□□□□□ -1.31
LSM5-208ENST00000450169 TRAV8-1A0A0A6YYK1 113 aa6.86□□□□□ -1.31
LSM5-208ENST00000450169 LMO7DNF2Z398 122 aa6.86□□□□□ -1.31
LSM5-208ENST00000450169 ZNF688P0C7X2 276 aa6.86□□□□□ -1.31
LSM5-208ENST00000450169 FCER1GP30273 86 aa6.86□□□□□ -1.31
LSM5-208ENST00000450169 ID1P41134 155 aa6.86□□□□□ -1.31
LSM5-208ENST00000450169 SSR4P51571 173 aa6.86□□□□□ -1.31
LSM5-208ENST00000450169 ZNF134P52741 427 aa6.86□□□□□ -1.31
LSM5-208ENST00000450169 EDDM3AQ14507 147 aa6.86□□□□□ -1.31
LSM5-208ENST00000450169 ZC2HC1BQ5TFG8 222 aa6.86□□□□□ -1.31
LSM5-208ENST00000450169 MORN3Q6PF18 240 aaPredicted RBP6.86□□□□□ -1.31
LSM5-208ENST00000450169 PTH2Q96A98 100 aa6.86□□□□□ -1.31
LSM5-208ENST00000450169 FAM173AQ9BQD7 235 aa6.86□□□□□ -1.31
LSM5-208ENST00000450169 TRBV20-1A0A075B6N2 111 aa6.85□□□□□ -1.31
LSM5-208ENST00000450169 TMEM262E9PQX1 116 aa6.85□□□□□ -1.31
LSM5-208ENST00000450169 SCRG1O75711 98 aa6.85□□□□□ -1.31
LSM5-208ENST00000450169 IL4P05112 153 aa6.85□□□□□ -1.31
LSM5-208ENST00000450169 ZNF826PQ6ZT77 177 aa6.85□□□□□ -1.31
LSM5-208ENST00000450169 AMN1Q8IY45 258 aa6.85□□□□□ -1.31
LSM5-208ENST00000450169 RBMXL3Q8N7X1 1067 aaKnown RBP6.85□□□□□ -1.31
LSM5-208ENST00000450169 TMEM158Q8WZ71 300 aa6.85□□□□□ -1.31
LSM5-208ENST00000450169 FLYWCH2Q96CP2 140 aaKnown RBP6.85□□□□□ -1.31
LSM5-208ENST00000450169 PRO3102Q9H379 93 aa6.85□□□□□ -1.31
LSM5-208ENST00000450169 Q9H3A6 140 aa6.85□□□□□ -1.31
LSM5-208ENST00000450169 FSCN3Q9NQT6 498 aa6.85□□□□□ -1.31
LSM5-208ENST00000450169 HEATR1Q9H583 2144 aaKnown RBP6.85□□□□□ -1.31
LSM5-208ENST00000450169 CENPVL3A0A0U1RRI6 287 aa6.85□□□□□ -1.31
LSM5-208ENST00000450169 TMEM8BA6NDV4 472 aa6.85□□□□□ -1.31
LSM5-208ENST00000450169 PRSS1P07477 247 aa6.85□□□□□ -1.31
LSM5-208ENST00000450169 GAGE2BQ13066 116 aa6.85□□□□□ -1.31
LSM5-208ENST00000450169 GAGE2EQ4V326 116 aa6.85□□□□□ -1.31
LSM5-208ENST00000450169 FAM104BQ5XKR9 115 aa6.85□□□□□ -1.31
LSM5-208ENST00000450169 Q6ZS46 218 aa6.85□□□□□ -1.31
LSM5-208ENST00000450169 PRNTQ86SH4 94 aa6.85□□□□□ -1.31
LSM5-208ENST00000450169 MAPKAPK5-AS1Q8N8E1 139 aa6.85□□□□□ -1.31
LSM5-208ENST00000450169 KIR2DL4Q99706 377 aa6.85□□□□□ -1.31
LSM5-208ENST00000450169 GAGE2DQ9UEU5 116 aa6.85□□□□□ -1.31
LSM5-208ENST00000450169 FZR1Q9UM11 496 aa6.85□□□□□ -1.31
LSM5-208ENST00000450169 KNTC1P50748 2209 aa6.84□□□□□ -1.31
LSM5-208ENST00000450169 SDK2Q58EX2 2172 aa6.84□□□□□ -1.31
LSM5-208ENST00000450169 IGKV3D-15A0A087WSY6 115 aa6.84□□□□□ -1.31
LSM5-208ENST00000450169 A0A1W2PQM1 296 aa6.84□□□□□ -1.31
LSM5-208ENST00000450169 DPM2O94777 84 aa6.84□□□□□ -1.31
LSM5-208ENST00000450169 PRTN3P24158 256 aa6.84□□□□□ -1.31
LSM5-208ENST00000450169 PSMB2P49721 201 aa6.84□□□□□ -1.31
LSM5-208ENST00000450169 PCOLCEQ15113 449 aa6.84□□□□□ -1.31
LSM5-208ENST00000450169 POU2AF1Q16633 256 aa6.84□□□□□ -1.31
LSM5-208ENST00000450169 Q71RC1 249 aaPredicted RBP6.84□□□□□ -1.31
LSM5-208ENST00000450169 MAP1LC3AQ9H492 121 aa6.84□□□□□ -1.31
LSM5-208ENST00000450169 FREM1Q5H8C1 2179 aa6.84□□□□□ -1.31
LSM5-208ENST00000450169 TRBV7-3A0A075B6L6 115 aa6.84□□□□□ -1.31
LSM5-208ENST00000450169 H3BTX0 84 aa6.84□□□□□ -1.31
LSM5-208ENST00000450169 UPK2O00526 184 aa6.84□□□□□ -1.31
LSM5-208ENST00000450169 HOXA3O43365 443 aaPredicted RBP6.84□□□□□ -1.31
LSM5-208ENST00000450169 RFPL3SP0C7P2 107 aa6.84□□□□□ -1.31
LSM5-208ENST00000450169 IFITM1P13164 125 aa6.84□□□□□ -1.31
LSM5-208ENST00000450169 ORM2P19652 201 aa6.84□□□□□ -1.31
LSM5-208ENST00000450169 LOXL3P58215 753 aa6.84□□□□□ -1.31
LSM5-208ENST00000450169 TWIST1Q15672 202 aa6.84□□□□□ -1.31
LSM5-208ENST00000450169 ALKBH6Q3KRA9 238 aa6.84□□□□□ -1.31
LSM5-208ENST00000450169 C22orf34Q6ZV56 151 aa6.84□□□□□ -1.31
LSM5-208ENST00000450169 RNF152Q8N8N0 203 aa6.84□□□□□ -1.31
LSM5-208ENST00000450169 NPIPB3Q92617 1050 aa6.84□□□□□ -1.31
LSM5-208ENST00000450169 VPREB3Q9UKI3 123 aa6.84□□□□□ -1.31
LSM5-208ENST00000450169 IGKV1D-37A0A075B6S9 117 aa6.83□□□□□ -1.32
LSM5-208ENST00000450169 TMEM213A2RRL7 107 aa6.83□□□□□ -1.32
LSM5-208ENST00000450169 SNCGO76070 127 aa6.83□□□□□ -1.32
LSM5-208ENST00000450169 NPYP01303 97 aa6.83□□□□□ -1.32
LSM5-208ENST00000450169 IGLV2-11P01706 119 aa6.83□□□□□ -1.32
LSM5-208ENST00000450169 IGLV3-19P01714 112 aa6.83□□□□□ -1.32
LSM5-208ENST00000450169 SAA2P0DJI9 122 aaPredicted RBP6.83□□□□□ -1.32
LSM5-208ENST00000450169 MRPL51Q4U2R6 128 aaKnown RBP6.83□□□□□ -1.32
LSM5-208ENST00000450169 TTC32Q5I0X7 151 aa6.83□□□□□ -1.32
LSM5-208ENST00000450169 TUSC5Q8IXB3 177 aa6.83□□□□□ -1.32
LSM5-208ENST00000450169 DEFB119Q8N690 84 aa6.83□□□□□ -1.32
LSM5-208ENST00000450169 AJUBAQ96IF1 538 aa6.83□□□□□ -1.32
LSM5-208ENST00000450169 FOXC2Q99958 501 aa6.83□□□□□ -1.32
LSM5-208ENST00000450169 FBXL15Q9H469 300 aa6.83□□□□□ -1.32
LSM5-208ENST00000450169 AKIRIN1Q9H9L7 192 aaPredicted RBP6.83□□□□□ -1.32
LSM5-208ENST00000450169 LOC107984156A0A0G2JMH3 177 aa6.83□□□□□ -1.32
LSM5-208ENST00000450169 LINC01548A6NM66 108 aa6.83□□□□□ -1.32
LSM5-208ENST00000450169 ZNF785A8K8V0 405 aa6.83□□□□□ -1.32
LSM5-208ENST00000450169 IGHV3-48P01763 117 aa6.83□□□□□ -1.32
LSM5-208ENST00000450169 GP9P14770 177 aa6.83□□□□□ -1.32
LSM5-208ENST00000450169 CKS2P33552 79 aa6.83□□□□□ -1.32
LSM5-208ENST00000450169 GOLT1AQ6ZVE7 132 aa6.83□□□□□ -1.32
LSM5-208ENST00000450169 ARL17AQ8IVW1 177 aa6.83□□□□□ -1.32
LSM5-208ENST00000450169 LEAP2Q969E1 77 aa6.83□□□□□ -1.32
LSM5-208ENST00000450169 RPEQ96AT9 228 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms