RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 BCL6BQ8N143 479 aaPredicted RBP8.2□□□□□ -1.1
VIPAS39-203ENST00000448935 IL36BQ9NZH7 164 aa8.2□□□□□ -1.1
VIPAS39-203ENST00000448935 VPREB3Q9UKI3 123 aa8.2□□□□□ -1.1
VIPAS39-203ENST00000448935 ABCA1O95477 2261 aa8.19□□□□□ -1.1
VIPAS39-203ENST00000448935 TRBV6-1A0A0K0K1D8 114 aa8.19□□□□□ -1.1
VIPAS39-203ENST00000448935 A0A1W2PPQ1 181 aa8.19□□□□□ -1.1
VIPAS39-203ENST00000448935 TYMSP04818 313 aa8.19□□□□□ -1.1
VIPAS39-203ENST00000448935 MGST1P10620 155 aaKnown RBP8.19□□□□□ -1.1
VIPAS39-203ENST00000448935 FAM3BP58499 235 aaPredicted RBP8.19□□□□□ -1.1
VIPAS39-203ENST00000448935 IBA57Q5T440 356 aaKnown RBP8.19□□□□□ -1.1
VIPAS39-203ENST00000448935 C1orf194Q5T5A4 169 aa8.19□□□□□ -1.1
VIPAS39-203ENST00000448935 LCE2AQ5TA79 106 aaPredicted RBP8.19□□□□□ -1.1
VIPAS39-203ENST00000448935 FAM231DQ6ZW35 169 aa8.19□□□□□ -1.1
VIPAS39-203ENST00000448935 ZFP82Q8N141 532 aa8.19□□□□□ -1.1
VIPAS39-203ENST00000448935 ZNF414Q96IQ9 312 aa8.19□□□□□ -1.1
VIPAS39-203ENST00000448935 METTL26Q96S19 204 aa8.19□□□□□ -1.1
VIPAS39-203ENST00000448935 PRDM13Q9H4Q3 707 aa8.19□□□□□ -1.1
VIPAS39-203ENST00000448935 LINC00527Q9UJ94 153 aa8.19□□□□□ -1.1
VIPAS39-203ENST00000448935 NOTCH2Q04721 2471 aa8.18□□□□□ -1.1
VIPAS39-203ENST00000448935 FBLL1A6NHQ2 334 aaKnown RBP8.18□□□□□ -1.1
VIPAS39-203ENST00000448935 IGLV1-40P01703 118 aa8.18□□□□□ -1.1
VIPAS39-203ENST00000448935 IGLV2-8P01709 118 aa8.18□□□□□ -1.1
VIPAS39-203ENST00000448935 ARL3P36405 182 aa8.18□□□□□ -1.1
VIPAS39-203ENST00000448935 CSN1S1P47710 185 aa8.18□□□□□ -1.1
VIPAS39-203ENST00000448935 MEOX2P50222 304 aa8.18□□□□□ -1.1
VIPAS39-203ENST00000448935 GNG5P63218 68 aa8.18□□□□□ -1.1
VIPAS39-203ENST00000448935 RPEL1Q2QD12 228 aa8.18□□□□□ -1.1
VIPAS39-203ENST00000448935 SIGLEC15Q6ZMC9 328 aa8.18□□□□□ -1.1
VIPAS39-203ENST00000448935 PRSS22Q9GZN4 317 aa8.18□□□□□ -1.1
VIPAS39-203ENST00000448935 RPH3ALQ9UNE2 315 aa8.18□□□□□ -1.1
VIPAS39-203ENST00000448935 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.18□□□□□ -1.1
VIPAS39-203ENST00000448935 NDUFA4O00483 81 aa8.18□□□□□ -1.1
VIPAS39-203ENST00000448935 SNRPCP09234 159 aaKnown RBP8.18□□□□□ -1.1
VIPAS39-203ENST00000448935 LINC00479Q96M42 142 aa8.18□□□□□ -1.1
VIPAS39-203ENST00000448935 NOL4LQ96MY1 436 aaPredicted RBP8.18□□□□□ -1.1
VIPAS39-203ENST00000448935 FOXC2Q99958 501 aa8.18□□□□□ -1.1
VIPAS39-203ENST00000448935 NPFFR1Q9GZQ6 430 aa8.18□□□□□ -1.1
VIPAS39-203ENST00000448935 TEX15Q9BXT5 2789 aa8.17□□□□□ -1.1
VIPAS39-203ENST00000448935 A0A087X0K7 114 aa8.17□□□□□ -1.1
VIPAS39-203ENST00000448935 TRAV34A0A0B4J273 112 aa8.17□□□□□ -1.1
VIPAS39-203ENST00000448935 H3BTX0 84 aa8.17□□□□□ -1.1
VIPAS39-203ENST00000448935 BUB3O43684 328 aa8.17□□□□□ -1.1
VIPAS39-203ENST00000448935 LTAP01374 205 aa8.17□□□□□ -1.1
VIPAS39-203ENST00000448935 SLC35B1P78383 322 aa8.17□□□□□ -1.1
VIPAS39-203ENST00000448935 CFHR3Q02985 330 aa8.17□□□□□ -1.1
VIPAS39-203ENST00000448935 OR5I1Q13606 314 aa8.17□□□□□ -1.1
VIPAS39-203ENST00000448935 COX19Q49B96 90 aa8.17□□□□□ -1.1
VIPAS39-203ENST00000448935 EXOC3-AS1Q8N2X6 119 aa8.17□□□□□ -1.1
VIPAS39-203ENST00000448935 TMEM75Q8N9X5 138 aa8.17□□□□□ -1.1
VIPAS39-203ENST00000448935 V9GYV3 84 aa8.17□□□□□ -1.1
VIPAS39-203ENST00000448935 USP9YO00507 2555 aaPredicted RBP8.17□□□□□ -1.1
VIPAS39-203ENST00000448935 UTP20O75691 2785 aaKnown RBP8.16□□□□□ -1.1
VIPAS39-203ENST00000448935 IGHV3-35A0A0C4DH35 117 aa8.16□□□□□ -1.1
VIPAS39-203ENST00000448935 ZNF320A2RRD8 509 aa8.16□□□□□ -1.1
VIPAS39-203ENST00000448935 GATCO43716 136 aaKnown RBP8.16□□□□□ -1.1
VIPAS39-203ENST00000448935 IGHG4P01861 327 aa8.16□□□□□ -1.1
VIPAS39-203ENST00000448935 TRGC2P03986 189 aa8.16□□□□□ -1.1
VIPAS39-203ENST00000448935 TMEM86BQ8N661 226 aa8.16□□□□□ -1.1
VIPAS39-203ENST00000448935 WFDC11Q8NEX6 87 aa8.16□□□□□ -1.1
VIPAS39-203ENST00000448935 SLC50A1Q9BRV3 221 aa8.16□□□□□ -1.1
VIPAS39-203ENST00000448935 SAV1Q9H4B6 383 aaPredicted RBP8.16□□□□□ -1.1
VIPAS39-203ENST00000448935 ZFP30Q9Y2G7 519 aa8.16□□□□□ -1.1
VIPAS39-203ENST00000448935 CRYBG3Q68DQ2 2970 aa8.15□□□□□ -1.1
VIPAS39-203ENST00000448935 FBN2P35556 2912 aa8.15□□□□□ -1.1
VIPAS39-203ENST00000448935 ZNF785A8K8V0 405 aa8.15□□□□□ -1.1
VIPAS39-203ENST00000448935 ZNF705GA8MUZ8 300 aaPredicted RBP8.15□□□□□ -1.1
VIPAS39-203ENST00000448935 SLC17A3O00476 420 aa8.15□□□□□ -1.1
VIPAS39-203ENST00000448935 GOLT1AQ6ZVE7 132 aa8.15□□□□□ -1.1
VIPAS39-203ENST00000448935 Q86TA4 180 aa8.15□□□□□ -1.1
VIPAS39-203ENST00000448935 TMEM183AQ8IXX5 376 aa8.15□□□□□ -1.1
VIPAS39-203ENST00000448935 GRAMD2BQ96HH9 432 aa8.15□□□□□ -1.1
VIPAS39-203ENST00000448935 C17orf77Q96MU5 243 aa8.15□□□□□ -1.1
VIPAS39-203ENST00000448935 MLST8Q9BVC4 326 aa8.15□□□□□ -1.1
VIPAS39-203ENST00000448935 RNASE7Q9H1E1 156 aaKnown RBP8.15□□□□□ -1.1
VIPAS39-203ENST00000448935 SERTAD4Q9NUC0 356 aa8.15□□□□□ -1.1
VIPAS39-203ENST00000448935 CLEC5AQ9NY25 188 aa8.15□□□□□ -1.1
VIPAS39-203ENST00000448935 ZNF492Q9P255 531 aa8.15□□□□□ -1.1
VIPAS39-203ENST00000448935 A0A1W2PS18 150 aa8.14□□□□□ -1.11
VIPAS39-203ENST00000448935 C5orf52A6NGY3 159 aa8.14□□□□□ -1.11
VIPAS39-203ENST00000448935 DIRC3C9JPN6 131 aa8.14□□□□□ -1.11
VIPAS39-203ENST00000448935 HOXA3O43365 443 aaPredicted RBP8.14□□□□□ -1.11
VIPAS39-203ENST00000448935 RPL15P61313 204 aaKnown RBP8.14□□□□□ -1.11
VIPAS39-203ENST00000448935 PSG3Q16557 428 aa8.14□□□□□ -1.11
VIPAS39-203ENST00000448935 HIST2H2BCQ6DN03 193 aa8.14□□□□□ -1.11
VIPAS39-203ENST00000448935 OR4X2Q8NGF9 303 aa8.14□□□□□ -1.11
VIPAS39-203ENST00000448935 DAZAP1Q96EP5 407 aaKnown RBP8.14□□□□□ -1.11
VIPAS39-203ENST00000448935 DOPEY2Q9Y3R5 2298 aa8.14□□□□□ -1.11
VIPAS39-203ENST00000448935 CLPSL1A2RUU4 121 aa8.14□□□□□ -1.11
VIPAS39-203ENST00000448935 UBE2CO00762 179 aa8.14□□□□□ -1.11
VIPAS39-203ENST00000448935 ELANEP08246 267 aa8.14□□□□□ -1.11
VIPAS39-203ENST00000448935 PSMB8P28062 276 aa8.14□□□□□ -1.11
VIPAS39-203ENST00000448935 SNRPEP62304 92 aaKnown RBP8.14□□□□□ -1.11
VIPAS39-203ENST00000448935 NHLRC2Q8NBF2 726 aa8.14□□□□□ -1.11
VIPAS39-203ENST00000448935 NUDT10Q8NFP7 164 aa8.14□□□□□ -1.11
VIPAS39-203ENST00000448935 NUDT11Q96G61 164 aa8.14□□□□□ -1.11
VIPAS39-203ENST00000448935 ZNF331Q9NQX6 463 aaPredicted RBP8.14□□□□□ -1.11
VIPAS39-203ENST00000448935 PSG8Q9UQ74 426 aa8.14□□□□□ -1.11
VIPAS39-203ENST00000448935 SMIM27A0A1W2PRY6 76 aa8.13□□□□□ -1.11
VIPAS39-203ENST00000448935 HIST1H2BKO60814 126 aa8.13□□□□□ -1.11
VIPAS39-203ENST00000448935 HIST1H2BJP06899 126 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms