RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 EBI3Q14213 229 aa8.52□□□□□ -1.05
LINC00342-202ENST00000448494 PRO0628Q9UI54 55 aa8.52□□□□□ -1.05
LINC00342-202ENST00000448494 AGRNO00468 2067 aa8.52□□□□□ -1.05
LINC00342-202ENST00000448494 PRUNE2Q8WUY3 3088 aa8.52□□□□□ -1.05
LINC00342-202ENST00000448494 IGKV3D-11A0A0A0MRZ8 115 aa8.51□□□□□ -1.05
LINC00342-202ENST00000448494 A0A0J9YW62 118 aa8.51□□□□□ -1.05
LINC00342-202ENST00000448494 A0A1W2PNR3 127 aa8.51□□□□□ -1.05
LINC00342-202ENST00000448494 LGALS9O00182 355 aa8.51□□□□□ -1.05
LINC00342-202ENST00000448494 TM4SF5O14894 197 aa8.51□□□□□ -1.05
LINC00342-202ENST00000448494 CRYGAP11844 174 aa8.51□□□□□ -1.05
LINC00342-202ENST00000448494 MALP21145 153 aa8.51□□□□□ -1.05
LINC00342-202ENST00000448494 C1orf53Q5VUE5 145 aa8.51□□□□□ -1.05
LINC00342-202ENST00000448494 NTN5Q8WTR8 489 aaPredicted RBP8.51□□□□□ -1.05
LINC00342-202ENST00000448494 FKBP2P26885 142 aaKnown RBP8.51□□□□□ -1.05
LINC00342-202ENST00000448494 FXYD7P58549 80 aa8.51□□□□□ -1.05
LINC00342-202ENST00000448494 ERVK-16P61578 105 aa8.51□□□□□ -1.05
LINC00342-202ENST00000448494 ZNF542PQ5EBM4 170 aa8.51□□□□□ -1.05
LINC00342-202ENST00000448494 FAM104BQ5XKR9 115 aa8.51□□□□□ -1.05
LINC00342-202ENST00000448494 DUX4L9Q6RFH8 374 aaPredicted RBP8.51□□□□□ -1.05
LINC00342-202ENST00000448494 AMN1Q8IY45 258 aa8.51□□□□□ -1.05
LINC00342-202ENST00000448494 FXYD5Q96DB9 178 aa8.51□□□□□ -1.05
LINC00342-202ENST00000448494 ZNF714Q96N38 554 aa8.51□□□□□ -1.05
LINC00342-202ENST00000448494 FAM236AA0A1B0GUQ0 79 aa8.5□□□□□ -1.05
LINC00342-202ENST00000448494 FAM236BA0A1B0GV22 79 aa8.5□□□□□ -1.05
LINC00342-202ENST00000448494 K7EM74 188 aa8.5□□□□□ -1.05
LINC00342-202ENST00000448494 TMEM155Q4W5P6 130 aa8.5□□□□□ -1.05
LINC00342-202ENST00000448494 FOXC2Q99958 501 aa8.5□□□□□ -1.05
LINC00342-202ENST00000448494 HEATR1Q9H583 2144 aaKnown RBP8.5□□□□□ -1.05
LINC00342-202ENST00000448494 ZNF576Q9H609 170 aa8.5□□□□□ -1.05
LINC00342-202ENST00000448494 PRNDQ9UKY0 176 aa8.5□□□□□ -1.05
LINC00342-202ENST00000448494 LINC00473A8K010 186 aa8.5□□□□□ -1.05
LINC00342-202ENST00000448494 PLNP26678 52 aa8.5□□□□□ -1.05
LINC00342-202ENST00000448494 NDUFA11Q86Y39 141 aa8.5□□□□□ -1.05
LINC00342-202ENST00000448494 WFDC3Q8IUB2 231 aa8.5□□□□□ -1.05
LINC00342-202ENST00000448494 UBALD1Q8TB05 177 aa8.5□□□□□ -1.05
LINC00342-202ENST00000448494 TMEM160Q9NX00 188 aa8.5□□□□□ -1.05
LINC00342-202ENST00000448494 KLK5Q9Y337 293 aaPredicted RBP8.5□□□□□ -1.05
LINC00342-202ENST00000448494 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.49□□□□□ -1.05
LINC00342-202ENST00000448494 K7ESF4 209 aa8.49□□□□□ -1.05
LINC00342-202ENST00000448494 CD3EP07766 207 aa8.49□□□□□ -1.05
LINC00342-202ENST00000448494 PYYP10082 97 aa8.49□□□□□ -1.05
LINC00342-202ENST00000448494 RPS21P63220 83 aaKnown RBP8.49□□□□□ -1.05
LINC00342-202ENST00000448494 C4orf26Q17RF5 130 aa8.49□□□□□ -1.05
LINC00342-202ENST00000448494 Q5XG85 94 aa8.49□□□□□ -1.05
LINC00342-202ENST00000448494 SFTA2Q6UW10 78 aa8.49□□□□□ -1.05
LINC00342-202ENST00000448494 HRCT1Q6UXD1 115 aa8.49□□□□□ -1.05
LINC00342-202ENST00000448494 PRDM14Q9GZV8 571 aa8.49□□□□□ -1.05
LINC00342-202ENST00000448494 ADAMTS20P59510 1910 aa8.49□□□□□ -1.05
LINC00342-202ENST00000448494 EML6Q6ZMW3 1958 aa8.49□□□□□ -1.05
LINC00342-202ENST00000448494 IGKV1OR2-108A0A075B7D4 117 aa8.49□□□□□ -1.05
LINC00342-202ENST00000448494 TRAV40A0A0B4J280 105 aa8.49□□□□□ -1.05
LINC00342-202ENST00000448494 ZNF785A8K8V0 405 aa8.49□□□□□ -1.05
LINC00342-202ENST00000448494 COX7CP15954 63 aa8.49□□□□□ -1.05
LINC00342-202ENST00000448494 ZNF32P17041 273 aa8.49□□□□□ -1.05
LINC00342-202ENST00000448494 TMEM258P61165 79 aa8.49□□□□□ -1.05
LINC00342-202ENST00000448494 PLGLB1Q02325 96 aa8.49□□□□□ -1.05
LINC00342-202ENST00000448494 PMVKQ15126 192 aa8.49□□□□□ -1.05
LINC00342-202ENST00000448494 MORN5Q5VZ52 161 aa8.49□□□□□ -1.05
LINC00342-202ENST00000448494 DTX2Q86UW9 622 aa8.49□□□□□ -1.05
LINC00342-202ENST00000448494 DPH3Q96FX2 82 aa8.49□□□□□ -1.05
LINC00342-202ENST00000448494 RS1O15537 224 aa8.48□□□□□ -1.05
LINC00342-202ENST00000448494 CNTFRP26992 372 aa8.48□□□□□ -1.05
LINC00342-202ENST00000448494 TRGV11A0A075B6L2 103 aa8.48□□□□□ -1.05
LINC00342-202ENST00000448494 IGLV3-32A0A0A0MS00 114 aa8.48□□□□□ -1.05
LINC00342-202ENST00000448494 PGPA6NDG6 321 aa8.48□□□□□ -1.05
LINC00342-202ENST00000448494 OVOL1O14753 267 aa8.48□□□□□ -1.05
LINC00342-202ENST00000448494 LEPP41159 167 aa8.48□□□□□ -1.05
LINC00342-202ENST00000448494 EFNA4P52798 201 aa8.48□□□□□ -1.05
LINC00342-202ENST00000448494 ZNF56Q15929 161 aa8.48□□□□□ -1.05
LINC00342-202ENST00000448494 ZNF672Q499Z4 452 aaPredicted RBP8.48□□□□□ -1.05
LINC00342-202ENST00000448494 LAMA2P24043 3122 aaKnown RBP8.48□□□□□ -1.05
LINC00342-202ENST00000448494 TRBV6-1A0A0K0K1D8 114 aa8.47□□□□□ -1.05
LINC00342-202ENST00000448494 TINCRA0A1B0GVN0 87 aa8.47□□□□□ -1.05
LINC00342-202ENST00000448494 C15orf61A6NNL5 157 aa8.47□□□□□ -1.05
LINC00342-202ENST00000448494 H3BMM0 161 aa8.47□□□□□ -1.05
LINC00342-202ENST00000448494 HLA-DMBP28068 263 aa8.47□□□□□ -1.05
LINC00342-202ENST00000448494 PCBD1P61457 104 aa8.47□□□□□ -1.05
LINC00342-202ENST00000448494 MZT1Q08AG7 82 aa8.47□□□□□ -1.05
LINC00342-202ENST00000448494 CCL4L1Q8NHW4 92 aa8.47□□□□□ -1.05
LINC00342-202ENST00000448494 RNF138Q8WVD3 245 aa8.47□□□□□ -1.05
LINC00342-202ENST00000448494 SRSF12Q8WXF0 261 aaKnown RBP8.47□□□□□ -1.05
LINC00342-202ENST00000448494 UBE2WQ96B02 151 aa8.47□□□□□ -1.05
LINC00342-202ENST00000448494 FOXA2Q9Y261 457 aaPredicted RBP8.47□□□□□ -1.05
LINC00342-202ENST00000448494 COX7A2P2O60397 106 aa8.47□□□□□ -1.05
LINC00342-202ENST00000448494 SRSF2Q01130 221 aaKnown RBP8.47□□□□□ -1.05
LINC00342-202ENST00000448494 MRPL51Q4U2R6 128 aaKnown RBP8.47□□□□□ -1.05
LINC00342-202ENST00000448494 C10orf113Q5VZT2 155 aa8.47□□□□□ -1.05
LINC00342-202ENST00000448494 Q86TA4 180 aa8.47□□□□□ -1.05
LINC00342-202ENST00000448494 NXT2Q9NPJ8 142 aaKnown RBP8.47□□□□□ -1.05
LINC00342-202ENST00000448494 MRPL35Q9NZE8 188 aaKnown RBP8.47□□□□□ -1.05
LINC00342-202ENST00000448494 RTTNQ86VV8 2226 aa8.47□□□□□ -1.05
LINC00342-202ENST00000448494 FCGR3BO75015 233 aa8.46□□□□□ -1.06
LINC00342-202ENST00000448494 TCRAP04437 139 aa8.46□□□□□ -1.06
LINC00342-202ENST00000448494 DYSFO75923 2080 aa8.46□□□□□ -1.06
LINC00342-202ENST00000448494 TNRC6BQ9UPQ9 1833 aaKnown RBP8.46□□□□□ -1.06
LINC00342-202ENST00000448494 OOEPA6NGQ2 149 aa8.46□□□□□ -1.06
LINC00342-202ENST00000448494 TRACP01848 142 aa8.46□□□□□ -1.06
LINC00342-202ENST00000448494 P0DMU3 169 aa8.46□□□□□ -1.06
LINC00342-202ENST00000448494 FAM231AP0DMU4 169 aa8.46□□□□□ -1.06
LINC00342-202ENST00000448494 FAM231CP0DMU5 169 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms