RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 hDV102S1A0JD36 115 aa10.25□□□□□ -0.77
SHC1-210ENST00000448116 LY6HO94772 140 aa10.25□□□□□ -0.77
SHC1-210ENST00000448116 NDUFB8O95169 186 aa10.25□□□□□ -0.77
SHC1-210ENST00000448116 PRSS22Q9GZN4 317 aa10.25□□□□□ -0.77
SHC1-210ENST00000448116 KAAG1Q9UBP8 84 aa10.25□□□□□ -0.77
SHC1-210ENST00000448116 SS18L2Q9UHA2 77 aa10.25□□□□□ -0.77
SHC1-210ENST00000448116 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.25□□□□□ -0.77
SHC1-210ENST00000448116 C19orf71A6NCJ1 209 aa10.25□□□□□ -0.77
SHC1-210ENST00000448116 TEX22C9J3V5 150 aa10.25□□□□□ -0.77
SHC1-210ENST00000448116 Q86TA4 180 aa10.25□□□□□ -0.77
SHC1-210ENST00000448116 OTORQ9NRC9 128 aa10.25□□□□□ -0.77
SHC1-210ENST00000448116 ANKHD1Q8IWZ3 2542 aaKnown RBP10.25□□□□□ -0.77
SHC1-210ENST00000448116 TMSB15BA0A087X1C1 80 aa10.24□□□□□ -0.77
SHC1-210ENST00000448116 SIVA1O15304 175 aa10.24□□□□□ -0.77
SHC1-210ENST00000448116 CD3EP07766 207 aa10.24□□□□□ -0.77
SHC1-210ENST00000448116 HES1Q14469 280 aa10.24□□□□□ -0.77
SHC1-210ENST00000448116 IGHV1-24A0A0C4DH33 117 aa10.24□□□□□ -0.77
SHC1-210ENST00000448116 IGLV1-47P01700 117 aa10.24□□□□□ -0.77
SHC1-210ENST00000448116 APOBEC3AP31941 199 aaPredicted RBP10.24□□□□□ -0.77
SHC1-210ENST00000448116 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.24□□□□□ -0.77
SHC1-210ENST00000448116 FBLL1A6NHQ2 334 aaKnown RBP10.24□□□□□ -0.77
SHC1-210ENST00000448116 M0R3E3 92 aa10.24□□□□□ -0.77
SHC1-210ENST00000448116 FCGR2BP31994 310 aaPredicted RBP10.24□□□□□ -0.77
SHC1-210ENST00000448116 SMIM12Q96EX1 92 aa10.24□□□□□ -0.77
SHC1-210ENST00000448116 A0A1B0GV72 72 aa10.23□□□□□ -0.77
SHC1-210ENST00000448116 TIMM23O14925 209 aa10.23□□□□□ -0.77
SHC1-210ENST00000448116 IGKV1-17P01599 117 aa10.23□□□□□ -0.77
SHC1-210ENST00000448116 CRYGBP07316 175 aa10.23□□□□□ -0.77
SHC1-210ENST00000448116 ARF6P62330 175 aa10.23□□□□□ -0.77
SHC1-210ENST00000448116 Q8NA96 180 aa10.23□□□□□ -0.77
SHC1-210ENST00000448116 OR4F17Q8NGA8 305 aa10.23□□□□□ -0.77
SHC1-210ENST00000448116 ZNF492Q9P255 531 aa10.23□□□□□ -0.77
SHC1-210ENST00000448116 FAM90A27PA6NNH2 459 aa10.23□□□□□ -0.77
SHC1-210ENST00000448116 IL4P05112 153 aa10.23□□□□□ -0.77
SHC1-210ENST00000448116 SMAGPQ0VAQ4 97 aa10.23□□□□□ -0.77
SHC1-210ENST00000448116 FAM162BQ5T6X4 162 aa10.23□□□□□ -0.77
SHC1-210ENST00000448116 MUC21A0A0G2JKD1 596 aa10.23□□□□□ -0.77
SHC1-210ENST00000448116 MUC21A0A140T8X8 626 aa10.23□□□□□ -0.77
SHC1-210ENST00000448116 ARMS2P0C7Q2 107 aa10.23□□□□□ -0.77
SHC1-210ENST00000448116 VAMP3Q15836 100 aa10.23□□□□□ -0.77
SHC1-210ENST00000448116 MUC21Q5SSG8 566 aa10.23□□□□□ -0.77
SHC1-210ENST00000448116 BPIFA4PQ86YQ2 179 aa10.23□□□□□ -0.77
SHC1-210ENST00000448116 SCNM1Q9BWG6 230 aa10.23□□□□□ -0.77
SHC1-210ENST00000448116 SPTBN1Q01082 2364 aaKnown RBP10.22□□□□□ -0.77
SHC1-210ENST00000448116 SYS1-DBNDD2H3BUS1 97 aa10.22□□□□□ -0.77
SHC1-210ENST00000448116 ZC2HC1AQ96GY0 325 aa10.22□□□□□ -0.77
SHC1-210ENST00000448116 TMUB1Q9BVT8 246 aa10.22□□□□□ -0.77
SHC1-210ENST00000448116 I3L2K1 104 aa10.22□□□□□ -0.77
SHC1-210ENST00000448116 MUC6Q6W4X9 2439 aa10.22□□□□□ -0.77
SHC1-210ENST00000448116 ZZEF1O43149 2961 aa10.21□□□□□ -0.77
SHC1-210ENST00000448116 FBLN7Q53RD9 439 aa10.21□□□□□ -0.77
SHC1-210ENST00000448116 CT83Q5H943 113 aa10.21□□□□□ -0.77
SHC1-210ENST00000448116 MUC15Q8N387 334 aa10.21□□□□□ -0.77
SHC1-210ENST00000448116 MRPS16Q9Y3D3 137 aaKnown RBP10.21□□□□□ -0.77
SHC1-210ENST00000448116 SOX21Q9Y651 276 aaPredicted RBP10.21□□□□□ -0.77
SHC1-210ENST00000448116 A0A1B0GUT8 65 aa10.21□□□□□ -0.77
SHC1-210ENST00000448116 PLP1P60201 277 aa10.21□□□□□ -0.77
SHC1-210ENST00000448116 BCL6BQ8N143 479 aaPredicted RBP10.21□□□□□ -0.77
SHC1-210ENST00000448116 IGHV3-23P01764 117 aa10.21□□□□□ -0.78
SHC1-210ENST00000448116 MAP1LC3CQ9BXW4 147 aa10.21□□□□□ -0.78
SHC1-210ENST00000448116 PSG8Q9UQ74 426 aa10.21□□□□□ -0.78
SHC1-210ENST00000448116 AKAP6Q13023 2319 aa10.21□□□□□ -0.78
SHC1-210ENST00000448116 K7EQM0 130 aa10.2□□□□□ -0.78
SHC1-210ENST00000448116 IGLV2-11P01706 119 aa10.2□□□□□ -0.78
SHC1-210ENST00000448116 HLA-DRB1P01911 266 aa10.2□□□□□ -0.78
SHC1-210ENST00000448116 FAM120AOSQ5T036 256 aa10.2□□□□□ -0.78
SHC1-210ENST00000448116 OR1N2Q8NGR9 330 aa10.2□□□□□ -0.78
SHC1-210ENST00000448116 CHCHD1Q96BP2 118 aaKnown RBP10.2□□□□□ -0.78
SHC1-210ENST00000448116 TMEM191AQ9H0A3 160 aa10.2□□□□□ -0.78
SHC1-210ENST00000448116 LOC389332A0A1B0GUA5 103 aa10.2□□□□□ -0.78
SHC1-210ENST00000448116 GRNP28799 593 aaKnown RBP10.2□□□□□ -0.78
SHC1-210ENST00000448116 RBPJQ06330 500 aa10.2□□□□□ -0.78
SHC1-210ENST00000448116 KLRD1Q13241 179 aa10.2□□□□□ -0.78
SHC1-210ENST00000448116 MPV17L2Q567V2 206 aa10.2□□□□□ -0.78
SHC1-210ENST00000448116 PRSS3P2Q8NHM4 247 aa10.2□□□□□ -0.78
SHC1-210ENST00000448116 JKAMPQ9P055 326 aa10.2□□□□□ -0.78
SHC1-210ENST00000448116 TRBV19A0A075B6N1 114 aa10.2□□□□□ -0.78
SHC1-210ENST00000448116 IGHV3OR16-8A0A075B7F1 116 aa10.2□□□□□ -0.78
SHC1-210ENST00000448116 K7EIM0 57 aa10.2□□□□□ -0.78
SHC1-210ENST00000448116 APOHP02749 345 aaPredicted RBP10.2□□□□□ -0.78
SHC1-210ENST00000448116 RNF125Q96EQ8 232 aa10.2□□□□□ -0.78
SHC1-210ENST00000448116 GFRA4Q9GZZ7 299 aa10.2□□□□□ -0.78
SHC1-210ENST00000448116 SNAI2O43623 268 aa10.19□□□□□ -0.78
SHC1-210ENST00000448116 PVRIGQ6DKI7 326 aa10.19□□□□□ -0.78
SHC1-210ENST00000448116 ZNF738Q8NE65 137 aa10.19□□□□□ -0.78
SHC1-210ENST00000448116 GTSF1LQ9H1H1 148 aa10.19□□□□□ -0.78
SHC1-210ENST00000448116 LRBAP50851 2863 aa10.19□□□□□ -0.78
SHC1-210ENST00000448116 IGHV3-35A0A0C4DH35 117 aa10.19□□□□□ -0.78
SHC1-210ENST00000448116 NUDT3O95989 172 aa10.19□□□□□ -0.78
SHC1-210ENST00000448116 TCTAP57738 103 aa10.19□□□□□ -0.78
SHC1-210ENST00000448116 RIGQ13278 110 aa10.19□□□□□ -0.78
SHC1-210ENST00000448116 C8orf49Q96NF6 230 aa10.19□□□□□ -0.78
SHC1-210ENST00000448116 SHANK2-AS3Q9BTD1 123 aa10.19□□□□□ -0.78
SHC1-210ENST00000448116 COL6A6A6NMZ7 2263 aa10.19□□□□□ -0.78
SHC1-210ENST00000448116 PTPRQQ9UMZ3 2332 aa10.19□□□□□ -0.78
SHC1-210ENST00000448116 NCBP2LA6PVI3 153 aaKnown RBP10.19□□□□□ -0.78
SHC1-210ENST00000448116 OR5AL1P0C617 328 aa10.19□□□□□ -0.78
SHC1-210ENST00000448116 CT45A10P0DMU9 189 aa10.19□□□□□ -0.78
SHC1-210ENST00000448116 ZNF672Q499Z4 452 aaPredicted RBP10.19□□□□□ -0.78
SHC1-210ENST00000448116 FA2HQ7L5A8 372 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms