RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 B4DEV8 164 aa2.84□□□□□ -1.95
VPS29-202ENST00000447578 MKRN2OSH3BPM6 223 aa2.84□□□□□ -1.95
VPS29-202ENST00000447578 CLDN34H7C241 214 aa2.84□□□□□ -1.95
VPS29-202ENST00000447578 RBFOX2O43251 390 aaKnown RBP eCLIP2.84□□□□□ -1.95
VPS29-202ENST00000447578 TRGC2P03986 189 aa2.84□□□□□ -1.95
VPS29-202ENST00000447578 S100A8P05109 93 aa2.84□□□□□ -1.95
VPS29-202ENST00000447578 SAA2P0DJI9 122 aaPredicted RBP2.84□□□□□ -1.95
VPS29-202ENST00000447578 CGB3P0DN86 165 aa2.84□□□□□ -1.95
VPS29-202ENST00000447578 CGB7P0DN87 165 aa2.84□□□□□ -1.95
VPS29-202ENST00000447578 DEFA4P12838 97 aa2.84□□□□□ -1.95
VPS29-202ENST00000447578 CDC34P49427 236 aaPredicted RBP2.84□□□□□ -1.95
VPS29-202ENST00000447578 SPCS3P61009 180 aa2.84□□□□□ -1.95
VPS29-202ENST00000447578 MEF2BQ02080 365 aaPredicted RBP2.84□□□□□ -1.95
VPS29-202ENST00000447578 PSG5Q15238 335 aa2.84□□□□□ -1.95
VPS29-202ENST00000447578 ADIRFQ15847 76 aa2.84□□□□□ -1.95
VPS29-202ENST00000447578 TMEM241Q24JQ0 296 aa2.84□□□□□ -1.95
VPS29-202ENST00000447578 FAM216BQ8N7L0 139 aa2.84□□□□□ -1.95
VPS29-202ENST00000447578 NECAP1Q8NC96 275 aa2.84□□□□□ -1.95
VPS29-202ENST00000447578 LINC01006Q8NI28 216 aa2.84□□□□□ -1.95
VPS29-202ENST00000447578 FAM210BQ96KR6 192 aa2.84□□□□□ -1.95
VPS29-202ENST00000447578 GAFA1Q96PS6 74 aa2.84□□□□□ -1.95
VPS29-202ENST00000447578 SMIM7Q9BQ49 75 aa2.84□□□□□ -1.95
VPS29-202ENST00000447578 TCEAL7Q9BRU2 100 aa2.84□□□□□ -1.95
VPS29-202ENST00000447578 ENY2Q9NPA8 101 aa2.84□□□□□ -1.95
VPS29-202ENST00000447578 MANBALQ9NQG1 85 aa2.84□□□□□ -1.95
VPS29-202ENST00000447578 METTL1Q9UBP6 276 aaKnown RBP2.84□□□□□ -1.95
VPS29-202ENST00000447578 PSG8Q9UQ74 426 aa2.84□□□□□ -1.95
VPS29-202ENST00000447578 NCOA6Q14686 2063 aaPredicted RBP2.84□□□□□ -1.95
VPS29-202ENST00000447578 REV3LO60673 3130 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 TRAV38-1A0A0B4J264 116 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 A0A1B0GW15 77 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 hADV38S2A0JD32 116 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 PLAC8L1A1L4L8 177 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 DPRXA6NFQ7 191 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 ZNF729A6NN14 1252 aaPredicted RBP2.83□□□□□ -1.96
VPS29-202ENST00000447578 KLLNB2CW77 178 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 C11orf94C9JXX5 98 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 UPK2O00526 184 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 ITGB1BP1O14713 200 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 TGOLN2O43493 480 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 YIF1AO95070 293 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 OR4A8P0C604 315 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 SMIM6P0DI80 62 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 MDKP21741 143 aaPredicted RBP2.83□□□□□ -1.96
VPS29-202ENST00000447578 S100PP25815 95 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 NPY1RP25929 384 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 S100A2P29034 98 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 PFN2P35080 140 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 OPRK1P41145 380 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 GALR1P47211 349 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 ATP5G3P48201 142 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 ZNF138P52744 262 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 TAS2R60P59551 318 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 UBE2G2P60604 165 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 RPL23P62829 140 aaKnown RBP2.83□□□□□ -1.96
VPS29-202ENST00000447578 CCL8P80075 99 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 DAZ2Q13117 558 aaKnown RBP2.83□□□□□ -1.96
VPS29-202ENST00000447578 RTL8BQ17RB0 113 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 CLEC12BQ2HXU8 276 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 BSXQ3C1V8 233 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 TEX36Q5VZQ5 186 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 MIC13Q5XKP0 118 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 CYP2G1PQ6ZSU1 146 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 TCF23Q7RTU1 214 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 DOLPP1Q86YN1 238 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 Q8N7P7 452 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 LINC00469Q8N7U9 141 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.83□□□□□ -1.96
VPS29-202ENST00000447578 ZNF439Q8NDP4 499 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 OR5T1Q8NG75 326 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 OR13D1Q8NGV5 346 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 ADTRPQ96IZ2 230 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 MGST2Q99735 147 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 ZNF251Q9BRH9 671 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 GGACTQ9BVM4 153 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 GGTLC1Q9BX51 225 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 NIT2Q9NQR4 276 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 DAZ3Q9NR90 486 aaKnown RBP2.83□□□□□ -1.96
VPS29-202ENST00000447578 TMEM242Q9NWH2 141 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 DOK5Q9P104 306 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 ZNRD1Q9P1U0 126 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 TP53TG5Q9Y2B4 290 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 OR51B2Q9Y5P1 312 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 PXMP4Q9Y6I8 212 aa2.83□□□□□ -1.96
VPS29-202ENST00000447578 SEC14L6B5MCN3 397 aa2.82□□□□□ -1.96
VPS29-202ENST00000447578 F6UZH7 168 aa2.82□□□□□ -1.96
VPS29-202ENST00000447578 TMEM250H0YL14 139 aa2.82□□□□□ -1.96
VPS29-202ENST00000447578 H7BYZ3 331 aa2.82□□□□□ -1.96
VPS29-202ENST00000447578 NDUFB3O43676 98 aa2.82□□□□□ -1.96
VPS29-202ENST00000447578 PDE6DO43924 150 aa2.82□□□□□ -1.96
VPS29-202ENST00000447578 HIST1H2BKO60814 126 aa2.82□□□□□ -1.96
VPS29-202ENST00000447578 NDUFS6O75380 124 aaKnown RBP2.82□□□□□ -1.96
VPS29-202ENST00000447578 CXorf1O96002 111 aa2.82□□□□□ -1.96
VPS29-202ENST00000447578 CA2P00918 260 aa2.82□□□□□ -1.96
VPS29-202ENST00000447578 HRASP01112 189 aa2.82□□□□□ -1.96
VPS29-202ENST00000447578 IGLV1-47P01700 117 aa2.82□□□□□ -1.96
VPS29-202ENST00000447578 IGLV2-23P01705 113 aa2.82□□□□□ -1.96
VPS29-202ENST00000447578 HIST1H2BJP06899 126 aa2.82□□□□□ -1.96
VPS29-202ENST00000447578 FABP1P07148 127 aa2.82□□□□□ -1.96
VPS29-202ENST00000447578 TRGC1P0CF51 173 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms