RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 IGFL4Q6B9Z1 124 aa13.46□□□□□ -0.25
TRAPPC4-203ENST00000447216 TEX261Q6UWH6 196 aa13.46□□□□□ -0.25
TRAPPC4-203ENST00000447216 DPPA3Q6W0C5 159 aa13.46□□□□□ -0.25
TRAPPC4-203ENST00000447216 IQCF2Q8IXL9 164 aa13.46□□□□□ -0.25
TRAPPC4-203ENST00000447216 DCANP1Q8TF63 244 aa13.46□□□□□ -0.25
TRAPPC4-203ENST00000447216 ZNF256Q9Y2P7 627 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC4-203ENST00000447216 AGRNO00468 2067 aa13.46□□□□□ -0.26
TRAPPC4-203ENST00000447216 SLC17A3O00476 420 aa13.45□□□□□ -0.26
TRAPPC4-203ENST00000447216 CXorf1O96002 111 aa13.45□□□□□ -0.26
TRAPPC4-203ENST00000447216 GCHFRP30047 84 aa13.45□□□□□ -0.26
TRAPPC4-203ENST00000447216 EGFEM1PQ0D2K5 195 aa13.45□□□□□ -0.26
TRAPPC4-203ENST00000447216 BEAN1Q3B7T3 259 aa13.45□□□□□ -0.26
TRAPPC4-203ENST00000447216 PQLC2Q6ZP29 291 aa13.45□□□□□ -0.26
TRAPPC4-203ENST00000447216 ZNF680Q8NEM1 530 aa13.45□□□□□ -0.26
TRAPPC4-203ENST00000447216 SFT2D1Q8WV19 159 aa13.45□□□□□ -0.26
TRAPPC4-203ENST00000447216 PRR25Q96S07 402 aa13.45□□□□□ -0.26
TRAPPC4-203ENST00000447216 HRH4Q9H3N8 390 aa13.45□□□□□ -0.26
TRAPPC4-203ENST00000447216 TMPRSS5Q9H3S3 457 aa13.45□□□□□ -0.26
TRAPPC4-203ENST00000447216 NBEAL1Q6ZS30 2694 aa13.44□□□□□ -0.26
TRAPPC4-203ENST00000447216 OR4C46A6NHA9 309 aa13.44□□□□□ -0.26
TRAPPC4-203ENST00000447216 ZNF705EA8MWA4 302 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC4-203ENST00000447216 SOCS3O14543 225 aa13.44□□□□□ -0.26
TRAPPC4-203ENST00000447216 H2AFB1P0C5Y9 115 aa13.44□□□□□ -0.26
TRAPPC4-203ENST00000447216 NBEAP1P0C6P0 100 aa13.44□□□□□ -0.26
TRAPPC4-203ENST00000447216 HLA-DMBP28068 263 aa13.44□□□□□ -0.26
TRAPPC4-203ENST00000447216 MBD3L1Q8WWY6 194 aa13.44□□□□□ -0.26
TRAPPC4-203ENST00000447216 C16orf92Q96LL3 132 aa13.44□□□□□ -0.26
TRAPPC4-203ENST00000447216 UBQLN2Q9UHD9 624 aa13.44□□□□□ -0.26
TRAPPC4-203ENST00000447216 TRBV19A0A075B6N1 114 aa13.43□□□□□ -0.26
TRAPPC4-203ENST00000447216 TRAV2A0A0B4J234 112 aa13.43□□□□□ -0.26
TRAPPC4-203ENST00000447216 TRAV8-2A0A0B4J237 113 aa13.43□□□□□ -0.26
TRAPPC4-203ENST00000447216 CD7P09564 240 aa13.43□□□□□ -0.26
TRAPPC4-203ENST00000447216 ZNF688P0C7X2 276 aa13.43□□□□□ -0.26
TRAPPC4-203ENST00000447216 MEOX2P50222 304 aa13.43□□□□□ -0.26
TRAPPC4-203ENST00000447216 RNF182Q8N6D2 247 aa13.43□□□□□ -0.26
TRAPPC4-203ENST00000447216 LRRC20Q8TCA0 184 aa13.43□□□□□ -0.26
TRAPPC4-203ENST00000447216 SAT2Q96F10 170 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC4-203ENST00000447216 NDUFB4O95168 129 aa13.42□□□□□ -0.26
TRAPPC4-203ENST00000447216 PRB4P10163 310 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC4-203ENST00000447216 CD81P60033 236 aa13.42□□□□□ -0.26
TRAPPC4-203ENST00000447216 PCNPQ8WW12 178 aaKnown RBP13.42□□□□□ -0.26
TRAPPC4-203ENST00000447216 C20orf173Q96LM9 149 aa13.42□□□□□ -0.26
TRAPPC4-203ENST00000447216 LINC00052Q96N35 136 aa13.42□□□□□ -0.26
TRAPPC4-203ENST00000447216 IFNA7P01567 189 aa13.41□□□□□ -0.26
TRAPPC4-203ENST00000447216 PRB2P02812 416 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC4-203ENST00000447216 IFITM2Q01629 132 aa13.41□□□□□ -0.26
TRAPPC4-203ENST00000447216 GUK1Q16774 197 aa13.41□□□□□ -0.26
TRAPPC4-203ENST00000447216 ODF3L2Q3SX64 289 aa13.41□□□□□ -0.26
TRAPPC4-203ENST00000447216 WFDC10AQ9H1F0 79 aa13.41□□□□□ -0.26
TRAPPC4-203ENST00000447216 MAP6D1Q9H9H5 199 aa13.41□□□□□ -0.26
TRAPPC4-203ENST00000447216 ZNF331Q9NQX6 463 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC4-203ENST00000447216 ISLRO14498 428 aa13.4□□□□□ -0.26
TRAPPC4-203ENST00000447216 ID1P41134 155 aa13.4□□□□□ -0.26
TRAPPC4-203ENST00000447216 PSMB3P49720 205 aa13.4□□□□□ -0.26
TRAPPC4-203ENST00000447216 DEFB131AP59861 70 aa13.4□□□□□ -0.26
TRAPPC4-203ENST00000447216 DEFB1P60022 68 aa13.4□□□□□ -0.26
TRAPPC4-203ENST00000447216 CCL20P78556 96 aa13.4□□□□□ -0.26
TRAPPC4-203ENST00000447216 PSMG4Q5JS54 123 aa13.4□□□□□ -0.26
TRAPPC4-203ENST00000447216 KPRPQ5T749 579 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC4-203ENST00000447216 EXOC3-AS1Q8N2X6 119 aa13.4□□□□□ -0.26
TRAPPC4-203ENST00000447216 SLC50A1Q9BRV3 221 aa13.4□□□□□ -0.26
TRAPPC4-203ENST00000447216 TMEM167BQ9NRX6 74 aa13.4□□□□□ -0.26
TRAPPC4-203ENST00000447216 UBE2G2P60604 165 aa13.39□□□□□ -0.27
TRAPPC4-203ENST00000447216 RANP62826 216 aaKnown RBP13.39□□□□□ -0.27
TRAPPC4-203ENST00000447216 PDE6HQ13956 83 aa13.39□□□□□ -0.27
TRAPPC4-203ENST00000447216 ZNF124Q15973 351 aa13.39□□□□□ -0.27
TRAPPC4-203ENST00000447216 GTSCR1Q86UQ5 136 aa13.39□□□□□ -0.27
TRAPPC4-203ENST00000447216 SUN5Q8TC36 379 aa13.39□□□□□ -0.27
TRAPPC4-203ENST00000447216 C19orf73Q9NVV2 129 aa13.39□□□□□ -0.27
TRAPPC4-203ENST00000447216 ZMAT5Q9UDW3 170 aaKnown RBP13.39□□□□□ -0.27
TRAPPC4-203ENST00000447216 ZNF253O75346 499 aa13.38□□□□□ -0.27
TRAPPC4-203ENST00000447216 SNRPD3P62318 126 aaKnown RBP13.38□□□□□ -0.27
TRAPPC4-203ENST00000447216 BLOC1S1P78537 153 aa13.38□□□□□ -0.27
TRAPPC4-203ENST00000447216 SAMD13Q5VXD3 122 aa13.38□□□□□ -0.27
TRAPPC4-203ENST00000447216 APRG1Q8IVJ8 170 aa13.38□□□□□ -0.27
TRAPPC4-203ENST00000447216 Q9H3A6 140 aa13.38□□□□□ -0.27
TRAPPC4-203ENST00000447216 TRAV1-1A0A0B4J248 108 aa13.37□□□□□ -0.27
TRAPPC4-203ENST00000447216 ZNF705FA8MVS1 300 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC4-203ENST00000447216 OR11H12B2RN74 326 aa13.37□□□□□ -0.27
TRAPPC4-203ENST00000447216 HBE1P02100 147 aa13.37□□□□□ -0.27
TRAPPC4-203ENST00000447216 PSG9Q00887 426 aa13.37□□□□□ -0.27
TRAPPC4-203ENST00000447216 ICAM4Q14773 271 aa13.37□□□□□ -0.27
TRAPPC4-203ENST00000447216 PSG3Q16557 428 aa13.37□□□□□ -0.27
TRAPPC4-203ENST00000447216 Q8N1Y9 231 aa13.37□□□□□ -0.27
TRAPPC4-203ENST00000447216 ZNF738Q8NE65 137 aa13.37□□□□□ -0.27
TRAPPC4-203ENST00000447216 YTHDF2Q9Y5A9 579 aaKnown RBP13.37□□□□□ -0.27
TRAPPC4-203ENST00000447216 M0R3E3 92 aa13.36□□□□□ -0.27
TRAPPC4-203ENST00000447216 DEFB125Q8N687 156 aa13.36□□□□□ -0.27
TRAPPC4-203ENST00000447216 AAMDCQ9H7C9 122 aa13.36□□□□□ -0.27
TRAPPC4-203ENST00000447216 AURKAIP1Q9NWT8 199 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC4-203ENST00000447216 PGPA6NDG6 321 aa13.35□□□□□ -0.27
TRAPPC4-203ENST00000447216 KNCNA6PVL3 124 aa13.35□□□□□ -0.27
TRAPPC4-203ENST00000447216 F6UB75 175 aa13.35□□□□□ -0.27
TRAPPC4-203ENST00000447216 TEX46H3BTG2 121 aa13.35□□□□□ -0.27
TRAPPC4-203ENST00000447216 OTORQ9NRC9 128 aa13.35□□□□□ -0.27
TRAPPC4-203ENST00000447216 GNG13Q9P2W3 67 aa13.35□□□□□ -0.27
TRAPPC4-203ENST00000447216 FAM74A7A6NL05 159 aa13.34□□□□□ -0.27
TRAPPC4-203ENST00000447216 PRAC2D3DTV9 90 aa13.34□□□□□ -0.27
TRAPPC4-203ENST00000447216 PAGE4O60829 102 aa13.34□□□□□ -0.27
TRAPPC4-203ENST00000447216 NMBP08949 121 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms