RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 HLA-DRB4X5D2U9 266 aa16.17■□□□□ 0.18
APOE-204ENST00000446996 TRAV8-2A0A0B4J237 113 aa16.16■□□□□ 0.18
APOE-204ENST00000446996 KNCNA6PVL3 124 aa16.16■□□□□ 0.18
APOE-204ENST00000446996 H3BMM0 161 aa16.16■□□□□ 0.18
APOE-204ENST00000446996 SMLR1H3BR10 107 aa16.16■□□□□ 0.18
APOE-204ENST00000446996 HIST1H1EP10412 219 aaKnown RBP16.16■□□□□ 0.18
APOE-204ENST00000446996 M6PRP20645 277 aa16.16■□□□□ 0.18
APOE-204ENST00000446996 RHOBP62745 196 aa16.16■□□□□ 0.18
APOE-204ENST00000446996 ST6GAL2Q96JF0 529 aa16.16■□□□□ 0.18
APOE-204ENST00000446996 ZNF331Q9NQX6 463 aaPredicted RBP16.16■□□□□ 0.18
APOE-204ENST00000446996 JTBO76095 146 aa16.15■□□□□ 0.18
APOE-204ENST00000446996 ATP6V0CP27449 155 aa16.15■□□□□ 0.18
APOE-204ENST00000446996 TCTE3Q8IZS6 198 aa16.15■□□□□ 0.18
APOE-204ENST00000446996 KCNRGQ8N5I3 272 aa16.15■□□□□ 0.18
APOE-204ENST00000446996 GNPNAT1Q96EK6 184 aaPredicted RBP16.15■□□□□ 0.18
APOE-204ENST00000446996 SAT2Q96F10 170 aaPredicted RBP16.15■□□□□ 0.18
APOE-204ENST00000446996 FAM167A-AS1Q96KT0 104 aa16.15■□□□□ 0.18
APOE-204ENST00000446996 C20orf173Q96LM9 149 aa16.15■□□□□ 0.18
APOE-204ENST00000446996 A0A0D9SG52 128 aa16.14■□□□□ 0.17
APOE-204ENST00000446996 MBP02144 154 aa16.14■□□□□ 0.17
APOE-204ENST00000446996 PDE6HQ13956 83 aa16.14■□□□□ 0.17
APOE-204ENST00000446996 PSG3Q16557 428 aa16.14■□□□□ 0.17
APOE-204ENST00000446996 RPL7L1Q6DKI1 246 aaKnown RBP16.14■□□□□ 0.17
APOE-204ENST00000446996 EBLN2Q6P2I7 272 aa16.14■□□□□ 0.17
APOE-204ENST00000446996 MIR17HGQ75NE6 70 aa16.14■□□□□ 0.17
APOE-204ENST00000446996 HSD17B11Q8NBQ5 300 aa16.14■□□□□ 0.17
APOE-204ENST00000446996 OR11H4Q8NGC9 324 aa16.14■□□□□ 0.17
APOE-204ENST00000446996 SLC25A2Q9BXI2 301 aa16.14■□□□□ 0.17
APOE-204ENST00000446996 H3BQ15 152 aa16.13■□□□□ 0.17
APOE-204ENST00000446996 TAS2R45P59539 299 aa16.13■□□□□ 0.17
APOE-204ENST00000446996 NUTF2P61970 127 aaKnown RBP16.13■□□□□ 0.17
APOE-204ENST00000446996 RNF183Q96D59 192 aa16.13■□□□□ 0.17
APOE-204ENST00000446996 A0A0J9YX75 114 aa16.12■□□□□ 0.17
APOE-204ENST00000446996 OVOL2Q9BRP0 275 aa16.12■□□□□ 0.17
APOE-204ENST00000446996 OR51M1Q9H341 326 aa16.12■□□□□ 0.17
APOE-204ENST00000446996 ZNF586Q9NXT0 402 aa16.12■□□□□ 0.17
APOE-204ENST00000446996 TRBV19A0A075B6N1 114 aa16.11■□□□□ 0.17
APOE-204ENST00000446996 A8MTW9 85 aa16.11■□□□□ 0.17
APOE-204ENST00000446996 SPRY2O43597 315 aa16.11■□□□□ 0.17
APOE-204ENST00000446996 DUSP14O95147 198 aaKnown RBP16.11■□□□□ 0.17
APOE-204ENST00000446996 CYTL1Q9NRR1 136 aa16.11■□□□□ 0.17
APOE-204ENST00000446996 RFNGQ9Y644 331 aa16.11■□□□□ 0.17
APOE-204ENST00000446996 A0A1W2PPV4 95 aa16.1■□□□□ 0.17
APOE-204ENST00000446996 CA1P00915 261 aaPredicted RBP16.1■□□□□ 0.17
APOE-204ENST00000446996 PSG9Q00887 426 aa16.1■□□□□ 0.17
APOE-204ENST00000446996 KHDC3LQ587J8 217 aa16.1■□□□□ 0.17
APOE-204ENST00000446996 GDF5OSQ5U4N7 250 aa16.1■□□□□ 0.17
APOE-204ENST00000446996 IGFL4Q6B9Z1 124 aa16.1■□□□□ 0.17
APOE-204ENST00000446996 RNF182Q8N6D2 247 aa16.1■□□□□ 0.17
APOE-204ENST00000446996 OR10G4Q8NGN3 311 aa16.1■□□□□ 0.17
APOE-204ENST00000446996 OR10G9Q8NGN4 311 aa16.1■□□□□ 0.17
APOE-204ENST00000446996 OR10G7Q8NGN6 311 aa16.1■□□□□ 0.17
APOE-204ENST00000446996 ARPC5LQ9BPX5 153 aa16.1■□□□□ 0.17
APOE-204ENST00000446996 PAXXQ9BUH6 204 aa16.1■□□□□ 0.17
APOE-204ENST00000446996 C1QTNF4Q9BXJ3 329 aa16.1■□□□□ 0.17
APOE-204ENST00000446996 NBEAP1P0C6P0 100 aa16.09■□□□□ 0.17
APOE-204ENST00000446996 PYYP10082 97 aa16.09■□□□□ 0.17
APOE-204ENST00000446996 ZNF738Q8NE65 137 aa16.09■□□□□ 0.17
APOE-204ENST00000446996 MRPL53Q96EL3 112 aaKnown RBP16.09■□□□□ 0.17
APOE-204ENST00000446996 WWC2-AS2Q96NR7 200 aa16.09■□□□□ 0.17
APOE-204ENST00000446996 PRELID1Q9Y255 219 aa16.09■□□□□ 0.17
APOE-204ENST00000446996 NBEAL2Q6ZNJ1 2754 aa16.08■□□□□ 0.16
APOE-204ENST00000446996 SLC17A3O00476 420 aa16.08■□□□□ 0.16
APOE-204ENST00000446996 GIG44P09565 113 aaPredicted RBP16.08■□□□□ 0.16
APOE-204ENST00000446996 RAB2AP61019 212 aa16.08■□□□□ 0.16
APOE-204ENST00000446996 DEFB135Q30KP9 77 aa16.08■□□□□ 0.16
APOE-204ENST00000446996 PQLC2Q6ZP29 291 aa16.08■□□□□ 0.16
APOE-204ENST00000446996 RNF141Q8WVD5 230 aa16.08■□□□□ 0.16
APOE-204ENST00000446996 RETNQ9HD89 108 aa16.08■□□□□ 0.16
APOE-204ENST00000446996 F6UB75 175 aa16.07■□□□□ 0.16
APOE-204ENST00000446996 C1QBP02746 253 aa16.07■□□□□ 0.16
APOE-204ENST00000446996 HLA-DMBP28068 263 aa16.07■□□□□ 0.16
APOE-204ENST00000446996 DEFB1P60022 68 aa16.07■□□□□ 0.16
APOE-204ENST00000446996 AKAP14Q86UN6 197 aa16.07■□□□□ 0.16
APOE-204ENST00000446996 RPUSD4Q96CM3 377 aaKnown RBP16.07■□□□□ 0.16
APOE-204ENST00000446996 FXYD5Q96DB9 178 aa16.07■□□□□ 0.16
APOE-204ENST00000446996 ZNF503Q96F45 646 aa16.07■□□□□ 0.16
APOE-204ENST00000446996 TENM3Q9P273 2699 aa16.06■□□□□ 0.16
APOE-204ENST00000446996 KANTRA0A1W2PQU2 76 aa16.06■□□□□ 0.16
APOE-204ENST00000446996 H3BTX0 84 aa16.06■□□□□ 0.16
APOE-204ENST00000446996 OR7C2O60412 319 aa16.06■□□□□ 0.16
APOE-204ENST00000446996 NDUFB4O95168 129 aa16.06■□□□□ 0.16
APOE-204ENST00000446996 SNRPCP09234 159 aaKnown RBP16.06■□□□□ 0.16
APOE-204ENST00000446996 LYPD1Q8N2G4 141 aa16.06■□□□□ 0.16
APOE-204ENST00000446996 RPP25LQ8N5L8 163 aaKnown RBP16.06■□□□□ 0.16
APOE-204ENST00000446996 OR4B1Q8NGF8 309 aa16.06■□□□□ 0.16
APOE-204ENST00000446996 OR8A1Q8NGG7 326 aa16.06■□□□□ 0.16
APOE-204ENST00000446996 SH3BGRL3Q9H299 93 aa16.06■□□□□ 0.16
APOE-204ENST00000446996 BCL2L11O43521 198 aa16.05■□□□□ 0.16
APOE-204ENST00000446996 C4BPBP20851 252 aa16.05■□□□□ 0.16
APOE-204ENST00000446996 CDC34P49427 236 aaPredicted RBP16.05■□□□□ 0.16
APOE-204ENST00000446996 EIF5AP63241 154 aaKnown RBP16.05■□□□□ 0.16
APOE-204ENST00000446996 FAM122CQ6P4D5 195 aa16.05■□□□□ 0.16
APOE-204ENST00000446996 HYLS1Q96M11 299 aa16.05■□□□□ 0.16
APOE-204ENST00000446996 hCG_2014768A0A024R1R8 64 aa16.04■□□□□ 0.16
APOE-204ENST00000446996 AMBPP02760 352 aa16.04■□□□□ 0.16
APOE-204ENST00000446996 STAG3L2P0CL84 134 aa16.04■□□□□ 0.16
APOE-204ENST00000446996 STAG3L3P0CL85 134 aa16.04■□□□□ 0.16
APOE-204ENST00000446996 CNN1P51911 297 aaKnown RBP16.04■□□□□ 0.16
APOE-204ENST00000446996 CSNK1G2-AS1Q8NCQ2 148 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms