RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 GPR183P32249 361 aa11.26□□□□□ -0.61
ERCC3-203ENST00000445889 DLX6P56179 175 aa11.26□□□□□ -0.61
ERCC3-203ENST00000445889 PET117Q6UWS5 81 aa11.26□□□□□ -0.61
ERCC3-203ENST00000445889 SOX21Q9Y651 276 aaPredicted RBP11.26□□□□□ -0.61
ERCC3-203ENST00000445889 TEX22C9J3V5 150 aa11.25□□□□□ -0.61
ERCC3-203ENST00000445889 IGKV1-17P01599 117 aa11.25□□□□□ -0.61
ERCC3-203ENST00000445889 MC5RP33032 325 aa11.25□□□□□ -0.61
ERCC3-203ENST00000445889 LGALS7P47929 136 aa11.25□□□□□ -0.61
ERCC3-203ENST00000445889 COTL1Q14019 142 aa11.25□□□□□ -0.61
ERCC3-203ENST00000445889 TMEM155Q4W5P6 130 aa11.25□□□□□ -0.61
ERCC3-203ENST00000445889 RNASE6Q93091 150 aaKnown RBP11.25□□□□□ -0.61
ERCC3-203ENST00000445889 SMIM12Q96EX1 92 aa11.25□□□□□ -0.61
ERCC3-203ENST00000445889 GFRA4Q9GZZ7 299 aa11.25□□□□□ -0.61
ERCC3-203ENST00000445889 HILPDAQ9Y5L2 63 aa11.25□□□□□ -0.61
ERCC3-203ENST00000445889 SMKR1H3BMG3 65 aa11.25□□□□□ -0.61
ERCC3-203ENST00000445889 OVOL3O00110 214 aa11.25□□□□□ -0.61
ERCC3-203ENST00000445889 HAX1O00165 279 aa11.25□□□□□ -0.61
ERCC3-203ENST00000445889 FA2HQ7L5A8 372 aa11.25□□□□□ -0.61
ERCC3-203ENST00000445889 F11RQ9Y624 299 aaKnown RBP11.25□□□□□ -0.61
ERCC3-203ENST00000445889 SPTBN1Q01082 2364 aaKnown RBP11.25□□□□□ -0.61
ERCC3-203ENST00000445889 IGHV1-3A0A0C4DH29 117 aa11.25□□□□□ -0.61
ERCC3-203ENST00000445889 RHOGP84095 191 aa11.25□□□□□ -0.61
ERCC3-203ENST00000445889 OCIAD2Q56VL3 154 aa11.25□□□□□ -0.61
ERCC3-203ENST00000445889 NUP37Q8NFH4 326 aa11.25□□□□□ -0.61
ERCC3-203ENST00000445889 ANKRD39Q53RE8 183 aa11.24□□□□□ -0.61
ERCC3-203ENST00000445889 Q6ZS92 163 aa11.24□□□□□ -0.61
ERCC3-203ENST00000445889 ZNF747Q9BV97 191 aa11.24□□□□□ -0.61
ERCC3-203ENST00000445889 OTORQ9NRC9 128 aa11.24□□□□□ -0.61
ERCC3-203ENST00000445889 C1RLQ9NZP8 487 aa11.24□□□□□ -0.61
ERCC3-203ENST00000445889 COL12A1Q99715 3063 aa11.24□□□□□ -0.61
ERCC3-203ENST00000445889 GAGE12BA1L429 117 aa11.24□□□□□ -0.61
ERCC3-203ENST00000445889 C7orf71A4D174 169 aa11.24□□□□□ -0.61
ERCC3-203ENST00000445889 NPIPB6E9PJ23 425 aa11.24□□□□□ -0.61
ERCC3-203ENST00000445889 IL4P05112 153 aa11.24□□□□□ -0.61
ERCC3-203ENST00000445889 PIP4P1Q86T03 277 aa11.24□□□□□ -0.61
ERCC3-203ENST00000445889 BPIFA4PQ86YQ2 179 aa11.24□□□□□ -0.61
ERCC3-203ENST00000445889 AMN1Q8IY45 258 aa11.24□□□□□ -0.61
ERCC3-203ENST00000445889 RALYQ9UKM9 306 aaKnown RBP11.24□□□□□ -0.61
ERCC3-203ENST00000445889 HIST1H1AQ02539 215 aaPredicted RBP11.23□□□□□ -0.61
ERCC3-203ENST00000445889 PRSS57Q6UWY2 283 aa11.23□□□□□ -0.61
ERCC3-203ENST00000445889 C2orf91Q6ZV80 131 aa11.23□□□□□ -0.61
ERCC3-203ENST00000445889 PSG8Q9UQ74 426 aa11.23□□□□□ -0.61
ERCC3-203ENST00000445889 CUL9Q8IWT3 2517 aa11.23□□□□□ -0.61
ERCC3-203ENST00000445889 D6R8Y8 96 aa11.23□□□□□ -0.61
ERCC3-203ENST00000445889 CEACAM4O75871 244 aa11.23□□□□□ -0.61
ERCC3-203ENST00000445889 LINC01545Q5VT33 79 aa11.23□□□□□ -0.61
ERCC3-203ENST00000445889 FAM57AQ8TBR7 257 aa11.23□□□□□ -0.61
ERCC3-203ENST00000445889 NGBQ9NPG2 151 aa11.23□□□□□ -0.61
ERCC3-203ENST00000445889 E7EQL1 145 aa11.22□□□□□ -0.61
ERCC3-203ENST00000445889 I3L2K1 104 aa11.22□□□□□ -0.61
ERCC3-203ENST00000445889 TNFRSF13BO14836 293 aaPredicted RBP11.22□□□□□ -0.61
ERCC3-203ENST00000445889 LINC00311Q8N616 119 aa11.22□□□□□ -0.61
ERCC3-203ENST00000445889 RPEQ96AT9 228 aa11.22□□□□□ -0.61
ERCC3-203ENST00000445889 NHLH1Q02575 133 aa11.22□□□□□ -0.61
ERCC3-203ENST00000445889 RIGQ13278 110 aa11.22□□□□□ -0.61
ERCC3-203ENST00000445889 PRR30Q53SZ7 412 aaPredicted RBP11.22□□□□□ -0.61
ERCC3-203ENST00000445889 CELSR1Q9NYQ6 3014 aa11.22□□□□□ -0.61
ERCC3-203ENST00000445889 TRBV19A0A075B6N1 114 aa11.22□□□□□ -0.61
ERCC3-203ENST00000445889 BUB1B-PAK6H3BSN5 160 aa11.22□□□□□ -0.61
ERCC3-203ENST00000445889 CD5LO43866 347 aa11.22□□□□□ -0.61
ERCC3-203ENST00000445889 COX8AP10176 69 aa11.22□□□□□ -0.61
ERCC3-203ENST00000445889 OR10AG1Q8NH19 301 aa11.22□□□□□ -0.61
ERCC3-203ENST00000445889 Q8TAT8 98 aa11.22□□□□□ -0.61
ERCC3-203ENST00000445889 CRYGBP07316 175 aa11.21□□□□□ -0.61
ERCC3-203ENST00000445889 CSN1S1P47710 185 aa11.21□□□□□ -0.61
ERCC3-203ENST00000445889 LYZL1Q6UWQ5 148 aa11.21□□□□□ -0.61
ERCC3-203ENST00000445889 RAB37Q96AX2 223 aa11.21□□□□□ -0.61
ERCC3-203ENST00000445889 MS4A6AQ9H2W1 248 aa11.21□□□□□ -0.61
ERCC3-203ENST00000445889 IGKV2-40A0A087WW87 121 aaPredicted RBP11.21□□□□□ -0.62
ERCC3-203ENST00000445889 FAM231BA6NCW3 169 aa11.21□□□□□ -0.62
ERCC3-203ENST00000445889 IGKV2D-40P01614 121 aaPredicted RBP11.21□□□□□ -0.62
ERCC3-203ENST00000445889 TM4SF20Q53R12 229 aa11.21□□□□□ -0.62
ERCC3-203ENST00000445889 SIGLEC15Q6ZMC9 328 aa11.21□□□□□ -0.62
ERCC3-203ENST00000445889 ONECUT1Q9UBC0 465 aa11.21□□□□□ -0.62
ERCC3-203ENST00000445889 TIMM23O14925 209 aa11.2□□□□□ -0.62
ERCC3-203ENST00000445889 SAP30O75446 220 aa11.2□□□□□ -0.62
ERCC3-203ENST00000445889 PIP4P2Q8N4L2 257 aa11.2□□□□□ -0.62
ERCC3-203ENST00000445889 TMEM75Q8N9X5 138 aa11.2□□□□□ -0.62
ERCC3-203ENST00000445889 MAP1AP78559 2803 aaPredicted RBP11.2□□□□□ -0.62
ERCC3-203ENST00000445889 A0A096LNJ9 63 aa11.2□□□□□ -0.62
ERCC3-203ENST00000445889 K7EIM0 57 aa11.2□□□□□ -0.62
ERCC3-203ENST00000445889 PRRG2O14669 202 aa11.2□□□□□ -0.62
ERCC3-203ENST00000445889 IGLV1-47P01700 117 aa11.2□□□□□ -0.62
ERCC3-203ENST00000445889 HLA-DMBP28068 263 aa11.2□□□□□ -0.62
ERCC3-203ENST00000445889 CACNG7P62955 275 aa11.2□□□□□ -0.62
ERCC3-203ENST00000445889 C3orf36Q3SXR2 165 aa11.2□□□□□ -0.62
ERCC3-203ENST00000445889 TMEM97Q5BJF2 176 aa11.2□□□□□ -0.62
ERCC3-203ENST00000445889 C18orf15Q96N68 181 aa11.2□□□□□ -0.62
ERCC3-203ENST00000445889 RABAC1Q9UI14 185 aa11.2□□□□□ -0.62
ERCC3-203ENST00000445889 GAS8-AS1O95177 125 aa11.19□□□□□ -0.62
ERCC3-203ENST00000445889 HES1Q14469 280 aa11.19□□□□□ -0.62
ERCC3-203ENST00000445889 ZNF491Q8N8L2 437 aa11.19□□□□□ -0.62
ERCC3-203ENST00000445889 SIGLEC8Q9NYZ4 499 aa11.19□□□□□ -0.62
ERCC3-203ENST00000445889 PEF1Q9UBV8 284 aaKnown RBP11.19□□□□□ -0.62
ERCC3-203ENST00000445889 GAGE10A6NGK3 116 aa11.19□□□□□ -0.62
ERCC3-203ENST00000445889 PLP1P60201 277 aa11.19□□□□□ -0.62
ERCC3-203ENST00000445889 KLRD1Q13241 179 aa11.19□□□□□ -0.62
ERCC3-203ENST00000445889 ABHD17AQ96GS6 310 aa11.19□□□□□ -0.62
ERCC3-203ENST00000445889 THYN1Q9P016 225 aa11.19□□□□□ -0.62
ERCC3-203ENST00000445889 ANKHD1Q8IWZ3 2542 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms