RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 GRAMD2BQ96HH9 432 aa14.62□□□□□ -0.07
SEMA3D-202ENST00000444867 TRAPPC1Q9Y5R8 145 aa14.62□□□□□ -0.07
SEMA3D-202ENST00000444867 TMEM183AQ8IXX5 376 aa14.61□□□□□ -0.07
SEMA3D-202ENST00000444867 LINC00527Q9UJ94 153 aa14.61□□□□□ -0.07
SEMA3D-202ENST00000444867 FLNBO75369 2602 aaKnown RBP14.61□□□□□ -0.07
SEMA3D-202ENST00000444867 UNC79Q9P2D8 2635 aa14.6□□□□□ -0.07
SEMA3D-202ENST00000444867 TPPP2P59282 170 aa14.6□□□□□ -0.07
SEMA3D-202ENST00000444867 BLCAPP62952 87 aa14.6□□□□□ -0.07
SEMA3D-202ENST00000444867 C1orf194Q5T5A4 169 aa14.6□□□□□ -0.07
SEMA3D-202ENST00000444867 MAPK1IP1LQ8NDC0 245 aa14.6□□□□□ -0.07
SEMA3D-202ENST00000444867 FBN2P35556 2912 aa14.6□□□□□ -0.07
SEMA3D-202ENST00000444867 A0A087X0K7 114 aa14.59□□□□□ -0.07
SEMA3D-202ENST00000444867 DIRC3C9JPN6 131 aa14.59□□□□□ -0.07
SEMA3D-202ENST00000444867 IGLV2-11P01706 119 aa14.59□□□□□ -0.07
SEMA3D-202ENST00000444867 IER3P46695 156 aa14.59□□□□□ -0.07
SEMA3D-202ENST00000444867 CSN1S1P47710 185 aa14.59□□□□□ -0.07
SEMA3D-202ENST00000444867 Q96MF0 132 aa14.59□□□□□ -0.07
SEMA3D-202ENST00000444867 ZFP30Q9Y2G7 519 aa14.59□□□□□ -0.07
SEMA3D-202ENST00000444867 PRRC2AP48634 2157 aaKnown RBP14.59□□□□□ -0.07
SEMA3D-202ENST00000444867 SETXQ7Z333 2677 aaKnown RBP14.59□□□□□ -0.07
SEMA3D-202ENST00000444867 FBLL1A6NHQ2 334 aaKnown RBP14.59□□□□□ -0.07
SEMA3D-202ENST00000444867 BUB3O43684 328 aa14.59□□□□□ -0.07
SEMA3D-202ENST00000444867 IGHV4-59P01825 116 aa14.59□□□□□ -0.07
SEMA3D-202ENST00000444867 CT83Q5H943 113 aa14.59□□□□□ -0.07
SEMA3D-202ENST00000444867 COA6Q5JTJ3 125 aaKnown RBP14.59□□□□□ -0.07
SEMA3D-202ENST00000444867 WDR73Q6P4I2 378 aa14.59□□□□□ -0.07
SEMA3D-202ENST00000444867 SGK494Q96LW2 274 aa14.59□□□□□ -0.07
SEMA3D-202ENST00000444867 METTL26Q96S19 204 aa14.59□□□□□ -0.07
SEMA3D-202ENST00000444867 IGHV3-35A0A0C4DH35 117 aa14.58□□□□□ -0.08
SEMA3D-202ENST00000444867 CLPSL1A2RUU4 121 aa14.58□□□□□ -0.08
SEMA3D-202ENST00000444867 IZUMO1RA6ND01 250 aa14.58□□□□□ -0.08
SEMA3D-202ENST00000444867 IGLV1-40P01703 118 aa14.58□□□□□ -0.08
SEMA3D-202ENST00000444867 PSG3Q16557 428 aa14.58□□□□□ -0.08
SEMA3D-202ENST00000444867 CYB5R2Q6BCY4 276 aa14.58□□□□□ -0.08
SEMA3D-202ENST00000444867 PRR27Q6MZM9 219 aa14.58□□□□□ -0.08
SEMA3D-202ENST00000444867 GNB1LQ9BYB4 327 aa14.58□□□□□ -0.08
SEMA3D-202ENST00000444867 SMAD5-AS1Q9Y6J3 95 aa14.58□□□□□ -0.08
SEMA3D-202ENST00000444867 C19orf71A6NCJ1 209 aa14.57□□□□□ -0.08
SEMA3D-202ENST00000444867 MT-ND6P03923 174 aa14.57□□□□□ -0.08
SEMA3D-202ENST00000444867 ARL3P36405 182 aa14.57□□□□□ -0.08
SEMA3D-202ENST00000444867 CFHR3Q02985 330 aa14.57□□□□□ -0.08
SEMA3D-202ENST00000444867 PRNTQ86SH4 94 aa14.57□□□□□ -0.08
SEMA3D-202ENST00000444867 KRTAP1-3Q8IUG1 177 aa14.57□□□□□ -0.08
SEMA3D-202ENST00000444867 TSKUQ8WUA8 353 aa14.57□□□□□ -0.08
SEMA3D-202ENST00000444867 NOL4LQ96MY1 436 aaPredicted RBP14.57□□□□□ -0.08
SEMA3D-202ENST00000444867 PRSS22Q9GZN4 317 aa14.57□□□□□ -0.08
SEMA3D-202ENST00000444867 U3KQE9 123 aa14.57□□□□□ -0.08
SEMA3D-202ENST00000444867 ABCA12Q86UK0 2595 aa14.56□□□□□ -0.08
SEMA3D-202ENST00000444867 VPS13CQ709C8 3753 aa14.56□□□□□ -0.08
SEMA3D-202ENST00000444867 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.56□□□□□ -0.08
SEMA3D-202ENST00000444867 A0A0G2JLM5 398 aa14.56□□□□□ -0.08
SEMA3D-202ENST00000444867 MEOX2P50222 304 aa14.56□□□□□ -0.08
SEMA3D-202ENST00000444867 RASL11AQ6T310 242 aa14.56□□□□□ -0.08
SEMA3D-202ENST00000444867 HIST3H2BBQ8N257 126 aa14.56□□□□□ -0.08
SEMA3D-202ENST00000444867 DAZAP1Q96EP5 407 aaKnown RBP14.56□□□□□ -0.08
SEMA3D-202ENST00000444867 RPP21Q9H633 154 aaKnown RBP14.56□□□□□ -0.08
SEMA3D-202ENST00000444867 PSG8Q9UQ74 426 aa14.56□□□□□ -0.08
SEMA3D-202ENST00000444867 APCP25054 2843 aa14.56□□□□□ -0.08
SEMA3D-202ENST00000444867 TRAV8-1A0A0A6YYK1 113 aa14.55□□□□□ -0.08
SEMA3D-202ENST00000444867 SMIM6P0DI80 62 aa14.55□□□□□ -0.08
SEMA3D-202ENST00000444867 PF4V1P10720 104 aa14.55□□□□□ -0.08
SEMA3D-202ENST00000444867 OR4B1Q8NGF8 309 aa14.55□□□□□ -0.08
SEMA3D-202ENST00000444867 NAT8BQ9UHF3 227 aa14.55□□□□□ -0.08
SEMA3D-202ENST00000444867 XKRY2A2RUG3 117 aa14.55□□□□□ -0.08
SEMA3D-202ENST00000444867 TMEM89A2RUT3 159 aa14.55□□□□□ -0.08
SEMA3D-202ENST00000444867 NDUFA4O00483 81 aa14.55□□□□□ -0.08
SEMA3D-202ENST00000444867 P01737 135 aa14.55□□□□□ -0.08
SEMA3D-202ENST00000444867 TCL1AP56279 114 aa14.55□□□□□ -0.08
SEMA3D-202ENST00000444867 FAM209BQ5JX69 171 aa14.55□□□□□ -0.08
SEMA3D-202ENST00000444867 Q6YL49 198 aa14.55□□□□□ -0.08
SEMA3D-202ENST00000444867 Q6ZS46 218 aa14.55□□□□□ -0.08
SEMA3D-202ENST00000444867 SLC50A1Q9BRV3 221 aa14.55□□□□□ -0.08
SEMA3D-202ENST00000444867 ZNF331Q9NQX6 463 aaPredicted RBP14.55□□□□□ -0.08
SEMA3D-202ENST00000444867 VPREB3Q9UKI3 123 aa14.55□□□□□ -0.08
SEMA3D-202ENST00000444867 IGHV3OR16-8A0A075B7F1 116 aa14.54□□□□□ -0.08
SEMA3D-202ENST00000444867 ZNF785A8K8V0 405 aa14.54□□□□□ -0.08
SEMA3D-202ENST00000444867 A8MWL6 223 aa14.54□□□□□ -0.08
SEMA3D-202ENST00000444867 NPIPB6E9PJ23 425 aa14.54□□□□□ -0.08
SEMA3D-202ENST00000444867 M0R3E3 92 aa14.54□□□□□ -0.08
SEMA3D-202ENST00000444867 CBLN1P23435 193 aa14.54□□□□□ -0.08
SEMA3D-202ENST00000444867 S100A2P29034 98 aa14.54□□□□□ -0.08
SEMA3D-202ENST00000444867 GBGT1Q8N5D6 347 aa14.54□□□□□ -0.08
SEMA3D-202ENST00000444867 MRPL18Q9H0U6 180 aaKnown RBP14.54□□□□□ -0.08
SEMA3D-202ENST00000444867 PRDM13Q9H4Q3 707 aa14.54□□□□□ -0.08
SEMA3D-202ENST00000444867 SNURFLB1AK76 121 aa14.53□□□□□ -0.08
SEMA3D-202ENST00000444867 CA1P00915 261 aaPredicted RBP14.53□□□□□ -0.08
SEMA3D-202ENST00000444867 WIPF2Q8TF74 440 aaPredicted RBP14.53□□□□□ -0.08
SEMA3D-202ENST00000444867 C12orf57Q99622 126 aa14.53□□□□□ -0.08
SEMA3D-202ENST00000444867 GFRA4Q9GZZ7 299 aa14.53□□□□□ -0.08
SEMA3D-202ENST00000444867 ITPR2Q14571 2701 aa14.53□□□□□ -0.08
SEMA3D-202ENST00000444867 FAM231BA6NCW3 169 aa14.52□□□□□ -0.08
SEMA3D-202ENST00000444867 IFITM10A6NMD0 228 aa14.52□□□□□ -0.08
SEMA3D-202ENST00000444867 LINC00322Q6ZN03 302 aaPredicted RBP14.52□□□□□ -0.08
SEMA3D-202ENST00000444867 CIARTQ8N365 385 aaPredicted RBP14.52□□□□□ -0.08
SEMA3D-202ENST00000444867 TEX29Q8N6K0 151 aa14.52□□□□□ -0.08
SEMA3D-202ENST00000444867 IGHG4P01861 327 aa14.52□□□□□ -0.09
SEMA3D-202ENST00000444867 HLA-DQA1P01909 254 aa14.52□□□□□ -0.09
SEMA3D-202ENST00000444867 GFI1BQ5VTD9 330 aa14.52□□□□□ -0.09
SEMA3D-202ENST00000444867 C16orf54Q6UWD8 224 aa14.52□□□□□ -0.09
SEMA3D-202ENST00000444867 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms