RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 AKR1C8PQ5T2L2 129 aa10.45□□□□□ -0.74
SSBP3-208ENST00000444533 ZNF738Q8NE65 137 aa10.45□□□□□ -0.74
SSBP3-208ENST00000444533 OR2G3Q8NGZ4 309 aa10.45□□□□□ -0.74
SSBP3-208ENST00000444533 HYLS1Q96M11 299 aa10.45□□□□□ -0.74
SSBP3-208ENST00000444533 PAXXQ9BUH6 204 aa10.45□□□□□ -0.74
SSBP3-208ENST00000444533 OR51M1Q9H341 326 aa10.45□□□□□ -0.74
SSBP3-208ENST00000444533 AAMDCQ9H7C9 122 aa10.45□□□□□ -0.74
SSBP3-208ENST00000444533 SOCS3O14543 225 aa10.44□□□□□ -0.74
SSBP3-208ENST00000444533 C1QBP02746 253 aa10.44□□□□□ -0.74
SSBP3-208ENST00000444533 HIST1H1EP10412 219 aaKnown RBP10.44□□□□□ -0.74
SSBP3-208ENST00000444533 SPP1P10451 314 aa10.44□□□□□ -0.74
SSBP3-208ENST00000444533 PSG9Q00887 426 aa10.44□□□□□ -0.74
SSBP3-208ENST00000444533 TMEM41BQ5BJD5 291 aa10.44□□□□□ -0.74
SSBP3-208ENST00000444533 MORN5Q5VZ52 161 aa10.44□□□□□ -0.74
SSBP3-208ENST00000444533 MORN3Q6PF18 240 aaPredicted RBP10.44□□□□□ -0.74
SSBP3-208ENST00000444533 FOXI2Q6ZQN5 318 aa10.44□□□□□ -0.74
SSBP3-208ENST00000444533 MIR17HGQ75NE6 70 aa10.44□□□□□ -0.74
SSBP3-208ENST00000444533 OR11H4Q8NGC9 324 aa10.44□□□□□ -0.74
SSBP3-208ENST00000444533 CITED4Q96RK1 184 aa10.44□□□□□ -0.74
SSBP3-208ENST00000444533 ZNF471Q9BX82 626 aaPredicted RBP10.44□□□□□ -0.74
SSBP3-208ENST00000444533 CSTL1Q9H114 145 aa10.44□□□□□ -0.74
SSBP3-208ENST00000444533 KNCNA6PVL3 124 aa10.43□□□□□ -0.74
SSBP3-208ENST00000444533 BCL2L11O43521 198 aa10.43□□□□□ -0.74
SSBP3-208ENST00000444533 ZNF253O75346 499 aa10.43□□□□□ -0.74
SSBP3-208ENST00000444533 IGLC2P0DOY2 106 aa10.43□□□□□ -0.74
SSBP3-208ENST00000444533 CDC34P49427 236 aaPredicted RBP10.43□□□□□ -0.74
SSBP3-208ENST00000444533 PDE6HQ13956 83 aa10.43□□□□□ -0.74
SSBP3-208ENST00000444533 ZNF124Q15973 351 aa10.43□□□□□ -0.74
SSBP3-208ENST00000444533 ZFP69Q49AA0 526 aa10.43□□□□□ -0.74
SSBP3-208ENST00000444533 FAM122CQ6P4D5 195 aa10.43□□□□□ -0.74
SSBP3-208ENST00000444533 LINC00322Q6ZN03 302 aaPredicted RBP10.43□□□□□ -0.74
SSBP3-208ENST00000444533 PQLC2Q6ZP29 291 aa10.43□□□□□ -0.74
SSBP3-208ENST00000444533 BLNKQ8WV28 456 aa10.43□□□□□ -0.74
SSBP3-208ENST00000444533 SLC25A2Q9BXI2 301 aa10.43□□□□□ -0.74
SSBP3-208ENST00000444533 ACTR3CQ9C0K3 210 aaPredicted RBP10.43□□□□□ -0.74
SSBP3-208ENST00000444533 PPP1R14DQ9NXH3 145 aa10.43□□□□□ -0.74
SSBP3-208ENST00000444533 MRPS12O15235 138 aaKnown RBP10.42□□□□□ -0.74
SSBP3-208ENST00000444533 DUSP14O95147 198 aaKnown RBP10.42□□□□□ -0.74
SSBP3-208ENST00000444533 HLA-DRB4P13762 266 aa10.42□□□□□ -0.74
SSBP3-208ENST00000444533 RAB2AP61019 212 aa10.42□□□□□ -0.74
SSBP3-208ENST00000444533 UBE2L3P68036 154 aaKnown RBP10.42□□□□□ -0.74
SSBP3-208ENST00000444533 PSG3Q16557 428 aa10.42□□□□□ -0.74
SSBP3-208ENST00000444533 EIF5AL1Q6IS14 154 aaKnown RBP10.42□□□□□ -0.74
SSBP3-208ENST00000444533 TMUB2Q71RG4 321 aa10.42□□□□□ -0.74
SSBP3-208ENST00000444533 OR4B1Q8NGF8 309 aa10.42□□□□□ -0.74
SSBP3-208ENST00000444533 RNF141Q8WVD5 230 aa10.42□□□□□ -0.74
SSBP3-208ENST00000444533 C1QTNF4Q9BXJ3 329 aa10.42□□□□□ -0.74
SSBP3-208ENST00000444533 SH3BGRL3Q9H299 93 aa10.42□□□□□ -0.74
SSBP3-208ENST00000444533 SAV1Q9H4B6 383 aaPredicted RBP10.42□□□□□ -0.74
SSBP3-208ENST00000444533 ZNF331Q9NQX6 463 aaPredicted RBP10.42□□□□□ -0.74
SSBP3-208ENST00000444533 HLA-DRB4X5D2U9 266 aa10.42□□□□□ -0.74
SSBP3-208ENST00000444533 TRBV19A0A075B6N1 114 aa10.41□□□□□ -0.74
SSBP3-208ENST00000444533 CA1P00915 261 aaPredicted RBP10.41□□□□□ -0.74
SSBP3-208ENST00000444533 SNRPCP09234 159 aaKnown RBP10.41□□□□□ -0.74
SSBP3-208ENST00000444533 NBEAP1P0C6P0 100 aa10.41□□□□□ -0.74
SSBP3-208ENST00000444533 PYYP10082 97 aa10.41□□□□□ -0.74
SSBP3-208ENST00000444533 TPT1P13693 172 aaKnown RBP10.41□□□□□ -0.74
SSBP3-208ENST00000444533 FAM74A1Q5RGS3 127 aa10.41□□□□□ -0.74
SSBP3-208ENST00000444533 Q6ZWC4 215 aa10.41□□□□□ -0.74
SSBP3-208ENST00000444533 TRPT1Q86TN4 253 aaKnown RBP10.41□□□□□ -0.74
SSBP3-208ENST00000444533 RNF182Q8N6D2 247 aa10.41□□□□□ -0.74
SSBP3-208ENST00000444533 OR10J6PQ8NGY7 276 aa10.41□□□□□ -0.74
SSBP3-208ENST00000444533 TM2D3Q9BRN9 247 aa10.41□□□□□ -0.74
SSBP3-208ENST00000444533 PRELID1Q9Y255 219 aa10.41□□□□□ -0.74
SSBP3-208ENST00000444533 U3KQK5 164 aa10.41□□□□□ -0.74
SSBP3-208ENST00000444533 DNAH3Q8TD57 4116 aa10.4□□□□□ -0.74
SSBP3-208ENST00000444533 H3BMM0 161 aa10.4□□□□□ -0.74
SSBP3-208ENST00000444533 H3BQ15 152 aa10.4□□□□□ -0.74
SSBP3-208ENST00000444533 H3BTX0 84 aa10.4□□□□□ -0.74
SSBP3-208ENST00000444533 OR10J4P0C629 311 aa10.4□□□□□ -0.74
SSBP3-208ENST00000444533 IGFL4Q6B9Z1 124 aa10.4□□□□□ -0.74
SSBP3-208ENST00000444533 RPUSD4Q96CM3 377 aaKnown RBP10.4□□□□□ -0.74
SSBP3-208ENST00000444533 C17orf77Q96MU5 243 aa10.4□□□□□ -0.74
SSBP3-208ENST00000444533 RCHY1Q96PM5 261 aa10.4□□□□□ -0.74
SSBP3-208ENST00000444533 ZNF586Q9NXT0 402 aa10.4□□□□□ -0.74
SSBP3-208ENST00000444533 TRAV8-2A0A0B4J237 113 aa10.39□□□□□ -0.75
SSBP3-208ENST00000444533 A0A0J9YX75 114 aa10.39□□□□□ -0.75
SSBP3-208ENST00000444533 IGKV3-20P01619 116 aa10.39□□□□□ -0.75
SSBP3-208ENST00000444533 CSN1S1P47710 185 aa10.39□□□□□ -0.75
SSBP3-208ENST00000444533 IQCF2Q8IXL9 164 aa10.39□□□□□ -0.75
SSBP3-208ENST00000444533 LYPD1Q8N2G4 141 aa10.39□□□□□ -0.75
SSBP3-208ENST00000444533 RAB24Q969Q5 203 aa10.39□□□□□ -0.75
SSBP3-208ENST00000444533 SAT2Q96F10 170 aaPredicted RBP10.39□□□□□ -0.75
SSBP3-208ENST00000444533 FAM167A-AS1Q96KT0 104 aa10.39□□□□□ -0.75
SSBP3-208ENST00000444533 C20orf173Q96LM9 149 aa10.39□□□□□ -0.75
SSBP3-208ENST00000444533 CYTL1Q9NRR1 136 aa10.39□□□□□ -0.75
SSBP3-208ENST00000444533 TP53TG1Q9Y2A0 90 aa10.39□□□□□ -0.75
SSBP3-208ENST00000444533 RFNGQ9Y644 331 aa10.39□□□□□ -0.75
SSBP3-208ENST00000444533 A0A1B0GVG6 124 aa10.38□□□□□ -0.75
SSBP3-208ENST00000444533 UMAD1C9J7I0 102 aa10.38□□□□□ -0.75
SSBP3-208ENST00000444533 SLC17A3O00476 420 aa10.38□□□□□ -0.75
SSBP3-208ENST00000444533 SPRY2O43597 315 aa10.38□□□□□ -0.75
SSBP3-208ENST00000444533 CXorf1O96002 111 aa10.38□□□□□ -0.75
SSBP3-208ENST00000444533 SEC11BP0C7V7 166 aa10.38□□□□□ -0.75
SSBP3-208ENST00000444533 HIST1H1AQ02539 215 aaPredicted RBP10.38□□□□□ -0.75
SSBP3-208ENST00000444533 DEFB135Q30KP9 77 aa10.38□□□□□ -0.75
SSBP3-208ENST00000444533 BAP18Q8IXM2 172 aa10.38□□□□□ -0.75
SSBP3-208ENST00000444533 RPP25LQ8N5L8 163 aaKnown RBP10.38□□□□□ -0.75
SSBP3-208ENST00000444533 STOML3Q8TAV4 291 aa10.38□□□□□ -0.75
SSBP3-208ENST00000444533 MRPL53Q96EL3 112 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms