RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 RBM38Q9H0Z9 239 aaKnown RBP8.36□□□□□ -1.07
TTC28-203ENST00000442232 ARV1Q9H2C2 271 aa8.36□□□□□ -1.07
TTC28-203ENST00000442232 PLA2G2EQ9NZK7 142 aa8.36□□□□□ -1.07
TTC28-203ENST00000442232 TRAV12-2A0A075B6T6 113 aa8.35□□□□□ -1.07
TTC28-203ENST00000442232 K7EPK0 472 aa8.35□□□□□ -1.07
TTC28-203ENST00000442232 CCNKO75909 580 aa8.35□□□□□ -1.07
TTC28-203ENST00000442232 CXCL3P19876 107 aa8.35□□□□□ -1.07
TTC28-203ENST00000442232 TSPOP30536 169 aa8.35□□□□□ -1.07
TTC28-203ENST00000442232 FAM3BP58499 235 aaPredicted RBP8.35□□□□□ -1.07
TTC28-203ENST00000442232 RAB31Q13636 194 aa8.35□□□□□ -1.07
TTC28-203ENST00000442232 RPUSD4Q96CM3 377 aaKnown RBP8.35□□□□□ -1.07
TTC28-203ENST00000442232 C17orf77Q96MU5 243 aa8.35□□□□□ -1.07
TTC28-203ENST00000442232 SLC50A1Q9BRV3 221 aa8.35□□□□□ -1.07
TTC28-203ENST00000442232 GGACTQ9BVM4 153 aa8.35□□□□□ -1.07
TTC28-203ENST00000442232 PMS2P5A8MQ11 134 aa8.34□□□□□ -1.07
TTC28-203ENST00000442232 FAM25EA8MYX2 175 aa8.34□□□□□ -1.07
TTC28-203ENST00000442232 F5H768 121 aa8.34□□□□□ -1.07
TTC28-203ENST00000442232 RTL8CO15255 209 aa8.34□□□□□ -1.07
TTC28-203ENST00000442232 CRXO43186 299 aaPredicted RBP8.34□□□□□ -1.07
TTC28-203ENST00000442232 ATP5G1P05496 136 aa8.34□□□□□ -1.07
TTC28-203ENST00000442232 IL7P13232 177 aa8.34□□□□□ -1.07
TTC28-203ENST00000442232 HTN1P15515 57 aa8.34□□□□□ -1.07
TTC28-203ENST00000442232 CDKN1BP46527 198 aa8.34□□□□□ -1.07
TTC28-203ENST00000442232 ATP5G3P48201 142 aa8.34□□□□□ -1.07
TTC28-203ENST00000442232 BCAP31P51572 246 aa8.34□□□□□ -1.07
TTC28-203ENST00000442232 TAS2R60P59551 318 aa8.34□□□□□ -1.07
TTC28-203ENST00000442232 LINC00305Q7Z4B0 112 aa8.34□□□□□ -1.07
TTC28-203ENST00000442232 BPIFA4PQ86YQ2 179 aa8.34□□□□□ -1.07
TTC28-203ENST00000442232 OR10J6PQ8NGY7 276 aa8.34□□□□□ -1.07
TTC28-203ENST00000442232 MITD1Q8WV92 249 aa8.34□□□□□ -1.07
TTC28-203ENST00000442232 C16orf74Q96GX8 76 aa8.34□□□□□ -1.07
TTC28-203ENST00000442232 C20orf85Q9H1P6 137 aa8.34□□□□□ -1.07
TTC28-203ENST00000442232 RCL1Q9Y2P8 373 aaKnown RBP8.34□□□□□ -1.07
TTC28-203ENST00000442232 NACAE9PAV3 2078 aa8.34□□□□□ -1.07
TTC28-203ENST00000442232 AGPAT2O15120 278 aa8.33□□□□□ -1.08
TTC28-203ENST00000442232 PVALBP20472 110 aaPredicted RBP8.33□□□□□ -1.08
TTC28-203ENST00000442232 C10orf113Q5VZT2 155 aa8.33□□□□□ -1.08
TTC28-203ENST00000442232 LSM5Q9Y4Y9 91 aaKnown RBP8.33□□□□□ -1.08
TTC28-203ENST00000442232 TIMM8BQ9Y5J9 83 aaPredicted RBP8.33□□□□□ -1.08
TTC28-203ENST00000442232 PXMP4Q9Y6I8 212 aa8.33□□□□□ -1.08
TTC28-203ENST00000442232 HERC2O95714 4834 aa8.33□□□□□ -1.08
TTC28-203ENST00000442232 A0A1B0GVY2 172 aa8.32□□□□□ -1.08
TTC28-203ENST00000442232 C7orf66A4D0T2 115 aa8.32□□□□□ -1.08
TTC28-203ENST00000442232 C5orf51A6NDU8 294 aa8.32□□□□□ -1.08
TTC28-203ENST00000442232 NUDT3O95989 172 aa8.32□□□□□ -1.08
TTC28-203ENST00000442232 MBPP02686 304 aaPredicted RBP8.32□□□□□ -1.08
TTC28-203ENST00000442232 BTCP35070 178 aa8.32□□□□□ -1.08
TTC28-203ENST00000442232 CAMLGP49069 296 aa8.32□□□□□ -1.08
TTC28-203ENST00000442232 CAV2P51636 162 aa8.32□□□□□ -1.08
TTC28-203ENST00000442232 C1orf134Q5TEV5 83 aa8.32□□□□□ -1.08
TTC28-203ENST00000442232 Q6ZRG5 221 aa8.32□□□□□ -1.08
TTC28-203ENST00000442232 CCDC28AQ8IWP9 274 aa8.32□□□□□ -1.08
TTC28-203ENST00000442232 ZNF331Q9NQX6 463 aaPredicted RBP8.32□□□□□ -1.08
TTC28-203ENST00000442232 CBY3A6NI87 242 aa8.31□□□□□ -1.08
TTC28-203ENST00000442232 H7BYZ3 331 aa8.31□□□□□ -1.08
TTC28-203ENST00000442232 CCSO14618 274 aa8.31□□□□□ -1.08
TTC28-203ENST00000442232 LYRM1O43325 122 aa8.31□□□□□ -1.08
TTC28-203ENST00000442232 PRM2P04554 102 aa8.31□□□□□ -1.08
TTC28-203ENST00000442232 CLINT1Q14677 625 aa8.31□□□□□ -1.08
TTC28-203ENST00000442232 PATE2Q6UY27 113 aa8.31□□□□□ -1.08
TTC28-203ENST00000442232 ZNF493Q6ZR52 646 aa8.31□□□□□ -1.08
TTC28-203ENST00000442232 Q6ZR54 194 aa8.31□□□□□ -1.08
TTC28-203ENST00000442232 OR1L4Q8NGR5 311 aa8.31□□□□□ -1.08
TTC28-203ENST00000442232 TMEM263Q8WUH6 116 aaKnown RBP8.31□□□□□ -1.08
TTC28-203ENST00000442232 MGST2Q99735 147 aa8.31□□□□□ -1.08
TTC28-203ENST00000442232 C20orf144Q9BQM9 153 aa8.31□□□□□ -1.08
TTC28-203ENST00000442232 MRPS12O15235 138 aaKnown RBP8.3□□□□□ -1.08
TTC28-203ENST00000442232 SNRPCP09234 159 aaKnown RBP8.3□□□□□ -1.08
TTC28-203ENST00000442232 MED14OSP0DP75 135 aa8.3□□□□□ -1.08
TTC28-203ENST00000442232 AZU1P20160 251 aa8.3□□□□□ -1.08
TTC28-203ENST00000442232 LEPP41159 167 aa8.3□□□□□ -1.08
TTC28-203ENST00000442232 CCL18P55774 89 aa8.3□□□□□ -1.08
TTC28-203ENST00000442232 S100A10P60903 97 aa8.3□□□□□ -1.08
TTC28-203ENST00000442232 ARL16Q0P5N6 197 aa8.3□□□□□ -1.08
TTC28-203ENST00000442232 GUK1Q16774 197 aa8.3□□□□□ -1.08
TTC28-203ENST00000442232 STX12Q86Y82 276 aa8.3□□□□□ -1.08
TTC28-203ENST00000442232 PFDN5Q99471 154 aa8.3□□□□□ -1.08
TTC28-203ENST00000442232 SDHCQ99643 169 aaPredicted RBP8.3□□□□□ -1.08
TTC28-203ENST00000442232 NOP10Q9NPE3 64 aaKnown RBP8.3□□□□□ -1.08
TTC28-203ENST00000442232 UQCC1Q9NVA1 299 aa8.3□□□□□ -1.08
TTC28-203ENST00000442232 DNAH17Q9UFH2 4485 aa8.3□□□□□ -1.08
TTC28-203ENST00000442232 TRAV6A0A075B6T7 132 aa8.29□□□□□ -1.08
TTC28-203ENST00000442232 PLAC8L1A1L4L8 177 aa8.29□□□□□ -1.08
TTC28-203ENST00000442232 SNURFLB1AK76 121 aa8.29□□□□□ -1.08
TTC28-203ENST00000442232 H3BTX0 84 aa8.29□□□□□ -1.08
TTC28-203ENST00000442232 TCRBP04435 133 aa8.29□□□□□ -1.08
TTC28-203ENST00000442232 PRB4P10163 310 aaPredicted RBP8.29□□□□□ -1.08
TTC28-203ENST00000442232 HBG1P69891 147 aa8.29□□□□□ -1.08
TTC28-203ENST00000442232 HBG2P69892 147 aa8.29□□□□□ -1.08
TTC28-203ENST00000442232 BAXQ07812 192 aa8.29□□□□□ -1.08
TTC28-203ENST00000442232 OPCMLQ14982 345 aa8.29□□□□□ -1.08
TTC28-203ENST00000442232 FCN2Q15485 313 aa8.29□□□□□ -1.08
TTC28-203ENST00000442232 NRARPQ7Z6K4 114 aa8.29□□□□□ -1.08
TTC28-203ENST00000442232 C12orf45Q8N5I9 185 aaPredicted RBP8.29□□□□□ -1.08
TTC28-203ENST00000442232 ZNF431Q8TF32 576 aaPredicted RBP8.29□□□□□ -1.08
TTC28-203ENST00000442232 DNAJC4Q9NNZ3 241 aa8.29□□□□□ -1.08
TTC28-203ENST00000442232 NUDT15Q9NV35 164 aa8.29□□□□□ -1.08
TTC28-203ENST00000442232 UBE2L5PA0A1B0GUS4 154 aa8.28□□□□□ -1.08
TTC28-203ENST00000442232 SLC17A3O00476 420 aa8.28□□□□□ -1.08
TTC28-203ENST00000442232 CST7O76096 145 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms