RNA–Protein interactions for RNA: ENST00000440984.3

ZNF140-208, Transcript of zinc finger protein 140, human

TSL 3

Gene ZNF140, Length 529 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF140-208	ENST00000440984	LCN15	Q6UWW0	184 aa		13.89	□□□□□ -0.19
ZNF140-208	ENST00000440984	FAM213B	Q8TBF2	198 aa		13.89	□□□□□ -0.19
ZNF140-208	ENST00000440984	LRRC20	Q8TCA0	184 aa		13.89	□□□□□ -0.19
ZNF140-208	ENST00000440984	ZNF503	Q96F45	646 aa		13.89	□□□□□ -0.19
ZNF140-208	ENST00000440984	C16orf92	Q96LL3	132 aa		13.89	□□□□□ -0.19
ZNF140-208	ENST00000440984	ISLR	O14498	428 aa		13.88	□□□□□ -0.19
ZNF140-208	ENST00000440984	SOCS3	O14543	225 aa		13.88	□□□□□ -0.19
ZNF140-208	ENST00000440984	CXorf1	O96002	111 aa		13.88	□□□□□ -0.19
ZNF140-208	ENST00000440984	OR10J4	P0C629	311 aa		13.88	□□□□□ -0.19
ZNF140-208	ENST00000440984	NBEAP1	P0C6P0	100 aa		13.88	□□□□□ -0.19
ZNF140-208	ENST00000440984	ARL14EPL	P0DKL9	152 aa		13.88	□□□□□ -0.19
ZNF140-208	ENST00000440984	SULT1A2	P50226	295 aa		13.88	□□□□□ -0.19
ZNF140-208	ENST00000440984	SNRPD3	P62318	126 aa	Known RBP	13.88	□□□□□ -0.19
ZNF140-208	ENST00000440984	UBE2L3	P68036	154 aa	Known RBP	13.88	□□□□□ -0.19
ZNF140-208	ENST00000440984	SSX7	Q7RTT5	188 aa		13.88	□□□□□ -0.19
ZNF140-208	ENST00000440984	FAM24B	Q8N5W8	94 aa		13.88	□□□□□ -0.19
ZNF140-208	ENST00000440984	FXYD5	Q96DB9	178 aa		13.88	□□□□□ -0.19
ZNF140-208	ENST00000440984	FAM110A	Q9BQ89	295 aa		13.88	□□□□□ -0.19
ZNF140-208	ENST00000440984		H3BTX0	84 aa		13.87	□□□□□ -0.19
ZNF140-208	ENST00000440984	ZNF688	P0C7X2	276 aa		13.87	□□□□□ -0.19
ZNF140-208	ENST00000440984	PSMB3	P49720	205 aa		13.87	□□□□□ -0.19
ZNF140-208	ENST00000440984	ALKAL2	Q6UX46	152 aa		13.87	□□□□□ -0.19
ZNF140-208	ENST00000440984		Q8N1Y9	231 aa		13.87	□□□□□ -0.19
ZNF140-208	ENST00000440984	BLNK	Q8WV28	456 aa		13.87	□□□□□ -0.19
ZNF140-208	ENST00000440984	SAT2	Q96F10	170 aa	Predicted RBP	13.87	□□□□□ -0.19
ZNF140-208	ENST00000440984	SLC50A1	Q9BRV3	221 aa		13.87	□□□□□ -0.19
ZNF140-208	ENST00000440984	TRBV19	A0A075B6N1	114 aa		13.86	□□□□□ -0.19
ZNF140-208	ENST00000440984	MAP1LC3B2	A6NCE7	125 aa		13.86	□□□□□ -0.19
ZNF140-208	ENST00000440984	OR11H12	B2RN74	326 aa		13.86	□□□□□ -0.19
ZNF140-208	ENST00000440984	ZNF253	O75346	499 aa		13.86	□□□□□ -0.19
ZNF140-208	ENST00000440984	GCHFR	P30047	84 aa		13.86	□□□□□ -0.19
ZNF140-208	ENST00000440984	PDE6H	Q13956	83 aa		13.86	□□□□□ -0.19
ZNF140-208	ENST00000440984	ODF3L2	Q3SX64	289 aa		13.86	□□□□□ -0.19
ZNF140-208	ENST00000440984	LCE2D	Q5TA82	110 aa	Predicted RBP	13.86	□□□□□ -0.19
ZNF140-208	ENST00000440984	MBD3L1	Q8WWY6	194 aa		13.86	□□□□□ -0.19
ZNF140-208	ENST00000440984	LINC00052	Q96N35	136 aa		13.86	□□□□□ -0.19
ZNF140-208	ENST00000440984	MAP1LC3B	Q9GZQ8	125 aa		13.86	□□□□□ -0.19
ZNF140-208	ENST00000440984	MAP6D1	Q9H9H5	199 aa		13.86	□□□□□ -0.19
ZNF140-208	ENST00000440984	ZNF331	Q9NQX6	463 aa	Predicted RBP	13.86	□□□□□ -0.19
ZNF140-208	ENST00000440984	C19orf73	Q9NVV2	129 aa		13.86	□□□□□ -0.19
ZNF140-208	ENST00000440984	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	13.86	□□□□□ -0.19
ZNF140-208	ENST00000440984	UBQLN2	Q9UHD9	624 aa		13.86	□□□□□ -0.19
ZNF140-208	ENST00000440984	TRAV8-2	A0A0B4J237	113 aa		13.85	□□□□□ -0.19
ZNF140-208	ENST00000440984	PRB2	P02812	416 aa	Predicted RBP	13.85	□□□□□ -0.19
ZNF140-208	ENST00000440984	DEFB131A	P59861	70 aa		13.85	□□□□□ -0.19
ZNF140-208	ENST00000440984	PSMG4	Q5JS54	123 aa		13.85	□□□□□ -0.19
ZNF140-208	ENST00000440984	FAM74A1	Q5RGS3	127 aa		13.85	□□□□□ -0.19
ZNF140-208	ENST00000440984	SLC17A3	O00476	420 aa		13.84	□□□□□ -0.19
ZNF140-208	ENST00000440984	NDUFB4	O95168	129 aa		13.84	□□□□□ -0.19
ZNF140-208	ENST00000440984	H2AFB1	P0C5Y9	115 aa		13.84	□□□□□ -0.19
ZNF140-208	ENST00000440984	FGF8	P55075	233 aa	Predicted RBP	13.84	□□□□□ -0.19
ZNF140-208	ENST00000440984	PSG9	Q00887	426 aa		13.84	□□□□□ -0.19
ZNF140-208	ENST00000440984	IGFL4	Q6B9Z1	124 aa		13.84	□□□□□ -0.19
ZNF140-208	ENST00000440984	SFT2D1	Q8WV19	159 aa		13.84	□□□□□ -0.19
ZNF140-208	ENST00000440984	TMEM167B	Q9NRX6	74 aa		13.84	□□□□□ -0.19
ZNF140-208	ENST00000440984	CLEC5A	Q9NY25	188 aa		13.84	□□□□□ -0.19
ZNF140-208	ENST00000440984	NOTCH1	P46531	2555 aa		13.84	□□□□□ -0.19
ZNF140-208	ENST00000440984	IQCF2	Q8IXL9	164 aa		13.83	□□□□□ -0.2
ZNF140-208	ENST00000440984	RAN	P62826	216 aa	Known RBP	13.82	□□□□□ -0.2
ZNF140-208	ENST00000440984	PSG3	Q16557	428 aa		13.82	□□□□□ -0.2
ZNF140-208	ENST00000440984	APRG1	Q8IVJ8	170 aa		13.82	□□□□□ -0.2
ZNF140-208	ENST00000440984	DEFB125	Q8N687	156 aa		13.82	□□□□□ -0.2
ZNF140-208	ENST00000440984	RNF182	Q8N6D2	247 aa		13.82	□□□□□ -0.2
ZNF140-208	ENST00000440984	SUN5	Q8TC36	379 aa		13.82	□□□□□ -0.2
ZNF140-208	ENST00000440984	C20orf173	Q96LM9	149 aa		13.82	□□□□□ -0.2
ZNF140-208	ENST00000440984	AAMDC	Q9H7C9	122 aa		13.82	□□□□□ -0.2
ZNF140-208	ENST00000440984	ZNF705E	A8MWA4	302 aa	Predicted RBP	13.81	□□□□□ -0.2
ZNF140-208	ENST00000440984		K7EIL1	84 aa		13.81	□□□□□ -0.2
ZNF140-208	ENST00000440984	HLA-DMB	P28068	263 aa		13.81	□□□□□ -0.2
ZNF140-208	ENST00000440984	TEX261	Q6UWH6	196 aa		13.81	□□□□□ -0.2
ZNF140-208	ENST00000440984	LYPD1	Q8N2G4	141 aa		13.81	□□□□□ -0.2
ZNF140-208	ENST00000440984	WFDC10A	Q9H1F0	79 aa		13.81	□□□□□ -0.2
ZNF140-208	ENST00000440984	TMPRSS5	Q9H3S3	457 aa		13.81	□□□□□ -0.2
ZNF140-208	ENST00000440984	TRAV1-1	A0A0B4J248	108 aa		13.8	□□□□□ -0.2
ZNF140-208	ENST00000440984	TEX46	H3BTG2	121 aa		13.8	□□□□□ -0.2
ZNF140-208	ENST00000440984	ZNF124	Q15973	351 aa		13.8	□□□□□ -0.2
ZNF140-208	ENST00000440984	EXOC3-AS1	Q8N2X6	119 aa		13.8	□□□□□ -0.2
ZNF140-208	ENST00000440984	ZNF738	Q8NE65	137 aa		13.8	□□□□□ -0.2
ZNF140-208	ENST00000440984	TUBA4B	Q9H853	241 aa		13.8	□□□□□ -0.2
ZNF140-208	ENST00000440984	PRELID1	Q9Y255	219 aa		13.8	□□□□□ -0.2
ZNF140-208	ENST00000440984	NBEAL1	Q6ZS30	2694 aa		13.8	□□□□□ -0.2
ZNF140-208	ENST00000440984	IFNA7	P01567	189 aa		13.79	□□□□□ -0.2
ZNF140-208	ENST00000440984	HBE1	P02100	147 aa		13.79	□□□□□ -0.2
ZNF140-208	ENST00000440984	BLOC1S1	P78537	153 aa		13.79	□□□□□ -0.2
ZNF140-208	ENST00000440984	ICAM4	Q14773	271 aa		13.79	□□□□□ -0.2
ZNF140-208	ENST00000440984	ZNF680	Q8NEM1	530 aa		13.79	□□□□□ -0.2
ZNF140-208	ENST00000440984		Q9H3A6	140 aa		13.79	□□□□□ -0.2
ZNF140-208	ENST00000440984	SRD5A3	Q9H8P0	318 aa		13.79	□□□□□ -0.2
ZNF140-208	ENST00000440984		A0A1B0GV50	99 aa		13.78	□□□□□ -0.2
ZNF140-208	ENST00000440984	DEFA6	Q01524	100 aa		13.78	□□□□□ -0.2
ZNF140-208	ENST00000440984	RPUSD4	Q96CM3	377 aa	Known RBP	13.78	□□□□□ -0.2
ZNF140-208	ENST00000440984	MRPL53	Q96EL3	112 aa	Known RBP	13.78	□□□□□ -0.2
ZNF140-208	ENST00000440984	CITED4	Q96RK1	184 aa		13.78	□□□□□ -0.2
ZNF140-208	ENST00000440984	OTOR	Q9NRC9	128 aa		13.78	□□□□□ -0.2
ZNF140-208	ENST00000440984	PGP	A6NDG6	321 aa		13.77	□□□□□ -0.21
ZNF140-208	ENST00000440984	KNCN	A6PVL3	124 aa		13.77	□□□□□ -0.21
ZNF140-208	ENST00000440984		A8MZ25	164 aa		13.77	□□□□□ -0.21
ZNF140-208	ENST00000440984		M0R3E3	92 aa		13.77	□□□□□ -0.21
ZNF140-208	ENST00000440984	IGHV4-30-4	P0DP06	118 aa		13.77	□□□□□ -0.21
ZNF140-208	ENST00000440984	DEFB1	P60022	68 aa		13.77	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms