RNA–Protein interactions for RNA: ENST00000440431.6

SCN3A-204, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 4,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-204ENST00000440431 PIEZO2Q9H5I5 2752 aa3.65□□□□□ -1.83
SCN3A-204ENST00000440431 SHANK1Q9Y566 2161 aa3.65□□□□□ -1.83
SCN3A-204ENST00000440431 IZUMO1RA6ND01 250 aa3.65□□□□□ -1.83
SCN3A-204ENST00000440431 RHODO00212 210 aa3.65□□□□□ -1.83
SCN3A-204ENST00000440431 IGHV4-39P01824 125 aa3.65□□□□□ -1.83
SCN3A-204ENST00000440431 SCGB1C2P0DMR2 95 aa3.65□□□□□ -1.83
SCN3A-204ENST00000440431 RNASE4P34096 147 aaKnown RBP3.65□□□□□ -1.83
SCN3A-204ENST00000440431 PSG3Q16557 428 aa3.65□□□□□ -1.83
SCN3A-204ENST00000440431 PYY3Q5JQD4 70 aa3.65□□□□□ -1.83
SCN3A-204ENST00000440431 C10orf55Q5SWW7 151 aa3.65□□□□□ -1.83
SCN3A-204ENST00000440431 TMEM136Q6ZRR5 245 aa3.65□□□□□ -1.83
SCN3A-204ENST00000440431 ATP5L2Q7Z4Y8 100 aa3.65□□□□□ -1.83
SCN3A-204ENST00000440431 WDR86Q86TI4 376 aa3.65□□□□□ -1.83
SCN3A-204ENST00000440431 OR10W1Q8NGF6 305 aa3.65□□□□□ -1.83
SCN3A-204ENST00000440431 IMMP2LQ96T52 175 aa3.65□□□□□ -1.83
SCN3A-204ENST00000440431 SHANK2-AS3Q9BTD1 123 aa3.65□□□□□ -1.83
SCN3A-204ENST00000440431 S4R3C0 116 aa3.65□□□□□ -1.83
SCN3A-204ENST00000440431 ATP6V0E1O15342 81 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 LEPROTL1O95214 131 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 COX6CP09669 75 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 LYL1P12980 280 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 DDTP30046 118 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 SRSF9Q13242 221 aaKnown RBP eCLIP3.64□□□□□ -1.83
SCN3A-204ENST00000440431 MSMPQ1L6U9 139 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 PDZD11Q5EBL8 140 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 RASL11AQ6T310 242 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 ORMDL3Q8N138 153 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 OR10D4PQ8NGN7 298 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 HS3ST6Q96QI5 342 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 MRPL18Q9H0U6 180 aaKnown RBP3.64□□□□□ -1.83
SCN3A-204ENST00000440431 NXT2Q9NPJ8 142 aaKnown RBP3.64□□□□□ -1.83
SCN3A-204ENST00000440431 HIVEP2P31629 2446 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 FBN2P35556 2912 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 TEX48A0A1B0GUV7 120 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 A0A1W2PPI3 338 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 PHOX2AO14813 284 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 RPL36AP83881 106 aaKnown RBP3.64□□□□□ -1.83
SCN3A-204ENST00000440431 SLAQ13239 276 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 FAM74A4Q5TZK3 123 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 FAM90A2PQ658T7 463 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 TTC9CQ8N5M4 171 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 TMEM158Q8WZ71 300 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 RPL36ALQ969Q0 106 aaKnown RBP3.64□□□□□ -1.83
SCN3A-204ENST00000440431 PRELID3AQ96N28 172 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 PMCHL2Q9BQD1 86 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 IGHV3-66A0A0C4DH42 116 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 CENPVL3A0A0U1RRI6 287 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 A6NDN8 102 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 C15orf62A8K5M9 175 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 PRSS47A8MTI9 375 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 C22orf46C9J442 243 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 TMEM262E9PQX1 116 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 H3BTX0 84 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 M0R381 172 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 M0R3E3 92 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 SEC11AP67812 179 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 ORMDL2Q53FV1 153 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 C9orf66Q5T8R8 295 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 ZNF841Q6ZN19 808 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 C11orf53Q8IXP5 236 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 ST20Q9HBF5 79 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 LINC00527Q9UJ94 153 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 YLPM1P49750 1951 aaKnown RBP3.64□□□□□ -1.83
SCN3A-204ENST00000440431 SPG11Q96JI7 2443 aa3.64□□□□□ -1.83
SCN3A-204ENST00000440431 CHD3Q12873 2000 aaKnown RBP3.64□□□□□ -1.83
SCN3A-204ENST00000440431 A0A087X0M5 115 aa3.63□□□□□ -1.83
SCN3A-204ENST00000440431 IGHV4-61A0A0C4DH41 118 aa3.63□□□□□ -1.83
SCN3A-204ENST00000440431 A0A1B0GX30 115 aa3.63□□□□□ -1.83
SCN3A-204ENST00000440431 H0YIZ8 118 aa3.63□□□□□ -1.83
SCN3A-204ENST00000440431 GATA2P23769 480 aaPredicted RBP3.63□□□□□ -1.83
SCN3A-204ENST00000440431 HINT1P49773 126 aaPredicted RBP3.63□□□□□ -1.83
SCN3A-204ENST00000440431 MST1LQ2TV78 715 aa3.63□□□□□ -1.83
SCN3A-204ENST00000440431 DEFB121Q5J5C9 76 aa3.63□□□□□ -1.83
SCN3A-204ENST00000440431 RUSC1-AS1Q66K80 236 aa3.63□□□□□ -1.83
SCN3A-204ENST00000440431 LHFPL4Q7Z7J7 247 aa3.63□□□□□ -1.83
SCN3A-204ENST00000440431 OR8A1Q8NGG7 326 aa3.63□□□□□ -1.83
SCN3A-204ENST00000440431 IGKV1-6A0A0C4DH72 117 aa3.63□□□□□ -1.83
SCN3A-204ENST00000440431 OVOL3O00110 214 aa3.63□□□□□ -1.83
SCN3A-204ENST00000440431 ZNF324O75467 553 aaPredicted RBP3.63□□□□□ -1.83
SCN3A-204ENST00000440431 PRSS2P07478 247 aa3.63□□□□□ -1.83
SCN3A-204ENST00000440431 SRSF3P84103 164 aaKnown RBP3.63□□□□□ -1.83
SCN3A-204ENST00000440431 SRSF2Q01130 221 aaKnown RBP3.63□□□□□ -1.83
SCN3A-204ENST00000440431 NPBQ8NG41 125 aa3.63□□□□□ -1.83
SCN3A-204ENST00000440431 IGFBPL1Q8WX77 278 aa3.63□□□□□ -1.83
SCN3A-204ENST00000440431 PLCE1Q9P212 2302 aa3.63□□□□□ -1.83
SCN3A-204ENST00000440431 AKAP9Q99996 3911 aa3.63□□□□□ -1.83
SCN3A-204ENST00000440431 IGHV4-30-2A0A087WSY4 118 aa3.63□□□□□ -1.83
SCN3A-204ENST00000440431 IFITM10A6NMD0 228 aa3.63□□□□□ -1.83
SCN3A-204ENST00000440431 PMS2P5A8MQ11 134 aa3.63□□□□□ -1.83
SCN3A-204ENST00000440431 TCRAP04437 139 aa3.63□□□□□ -1.83
SCN3A-204ENST00000440431 SNRPCP09234 159 aaKnown RBP3.63□□□□□ -1.83
SCN3A-204ENST00000440431 HOXB4P17483 251 aaPredicted RBP3.63□□□□□ -1.83
SCN3A-204ENST00000440431 MYCNOSP40205 109 aa3.63□□□□□ -1.83
SCN3A-204ENST00000440431 INSL3P51460 131 aa3.63□□□□□ -1.83
SCN3A-204ENST00000440431 DEFB112Q30KQ8 113 aa3.63□□□□□ -1.83
SCN3A-204ENST00000440431 ZNF329Q86UD4 541 aa3.63□□□□□ -1.83
SCN3A-204ENST00000440431 C11orf44Q8N8P7 122 aa3.63□□□□□ -1.83
SCN3A-204ENST00000440431 AURKAIP1Q9NWT8 199 aaPredicted RBP3.63□□□□□ -1.83
SCN3A-204ENST00000440431 TMEM14CQ9P0S9 112 aa3.63□□□□□ -1.83
SCN3A-204ENST00000440431 LENEPQ9Y5L5 61 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms