RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 SPATA31B1PQ5VZV4 182 aa11.69□□□□□ -0.54
ITGB1-207ENST00000439974 DNAH6Q9C0G6 4158 aa11.69□□□□□ -0.54
ITGB1-207ENST00000439974 FXYD6-FXYD2A0A087WZ82 144 aa11.68□□□□□ -0.54
ITGB1-207ENST00000439974 MRPS12O15235 138 aaKnown RBP11.68□□□□□ -0.54
ITGB1-207ENST00000439974 RPL7P18124 248 aaKnown RBP11.68□□□□□ -0.54
ITGB1-207ENST00000439974 C4BPBP20851 252 aa11.68□□□□□ -0.54
ITGB1-207ENST00000439974 S100A7P31151 101 aa11.68□□□□□ -0.54
ITGB1-207ENST00000439974 PSMB3P49720 205 aa11.68□□□□□ -0.54
ITGB1-207ENST00000439974 FXYD7P58549 80 aa11.68□□□□□ -0.54
ITGB1-207ENST00000439974 NANOS2P60321 138 aaKnown RBP11.68□□□□□ -0.54
ITGB1-207ENST00000439974 GPR82Q96P67 336 aa11.68□□□□□ -0.54
ITGB1-207ENST00000439974 CLEC5AQ9NY25 188 aa11.68□□□□□ -0.54
ITGB1-207ENST00000439974 ELOA3CA0A087WX78 387 aaPredicted RBP11.67□□□□□ -0.54
ITGB1-207ENST00000439974 ISLRO14498 428 aa11.67□□□□□ -0.54
ITGB1-207ENST00000439974 MPDU1O75352 247 aa11.67□□□□□ -0.54
ITGB1-207ENST00000439974 EIF3GO75821 320 aaKnown RBP eCLIP11.67□□□□□ -0.54
ITGB1-207ENST00000439974 GIG44P09565 113 aaPredicted RBP11.67□□□□□ -0.54
ITGB1-207ENST00000439974 ZNF705DP0CH99 300 aaPredicted RBP11.67□□□□□ -0.54
ITGB1-207ENST00000439974 ZNF705BP0CI00 300 aaPredicted RBP11.67□□□□□ -0.54
ITGB1-207ENST00000439974 LGALS9CQ6DKI2 356 aa11.67□□□□□ -0.54
ITGB1-207ENST00000439974 OR1L4Q8NGR5 311 aa11.67□□□□□ -0.54
ITGB1-207ENST00000439974 OR2T35Q8NGX2 323 aa11.67□□□□□ -0.54
ITGB1-207ENST00000439974 G3V3Q6 166 aa11.66□□□□□ -0.54
ITGB1-207ENST00000439974 H3BMM0 161 aa11.66□□□□□ -0.54
ITGB1-207ENST00000439974 H3BQ15 152 aa11.66□□□□□ -0.54
ITGB1-207ENST00000439974 DEFB4AO15263 64 aa11.66□□□□□ -0.54
ITGB1-207ENST00000439974 IFNA5P01569 189 aa11.66□□□□□ -0.54
ITGB1-207ENST00000439974 MEOX2P50222 304 aa11.66□□□□□ -0.54
ITGB1-207ENST00000439974 TMEM41BQ5BJD5 291 aa11.66□□□□□ -0.54
ITGB1-207ENST00000439974 RPP25LQ8N5L8 163 aaKnown RBP11.66□□□□□ -0.54
ITGB1-207ENST00000439974 ZNF709Q8N972 641 aa11.66□□□□□ -0.54
ITGB1-207ENST00000439974 SEPSECSQ9HD40 501 aaKnown RBP11.66□□□□□ -0.54
ITGB1-207ENST00000439974 SLC17A3O00476 420 aa11.65□□□□□ -0.54
ITGB1-207ENST00000439974 SPP1P10451 314 aa11.65□□□□□ -0.54
ITGB1-207ENST00000439974 MORN3Q6PF18 240 aaPredicted RBP11.65□□□□□ -0.54
ITGB1-207ENST00000439974 MIR17HGQ75NE6 70 aa11.65□□□□□ -0.54
ITGB1-207ENST00000439974 S100A7AQ86SG5 101 aa11.65□□□□□ -0.54
ITGB1-207ENST00000439974 OR4B1Q8NGF8 309 aa11.65□□□□□ -0.54
ITGB1-207ENST00000439974 LRRC20Q8TCA0 184 aa11.65□□□□□ -0.54
ITGB1-207ENST00000439974 SCGB1C1Q8TD33 95 aa11.65□□□□□ -0.54
ITGB1-207ENST00000439974 PFDN5Q99471 154 aa11.65□□□□□ -0.54
ITGB1-207ENST00000439974 SAV1Q9H4B6 383 aaPredicted RBP11.65□□□□□ -0.54
ITGB1-207ENST00000439974 A0A087X0K7 114 aa11.64□□□□□ -0.55
ITGB1-207ENST00000439974 PYYP10082 97 aa11.64□□□□□ -0.55
ITGB1-207ENST00000439974 HLA-DRB4P13762 266 aa11.64□□□□□ -0.55
ITGB1-207ENST00000439974 FFAR4Q5NUL3 377 aa11.64□□□□□ -0.55
ITGB1-207ENST00000439974 FAM78BQ5VT40 261 aa11.64□□□□□ -0.55
ITGB1-207ENST00000439974 FOXI2Q6ZQN5 318 aa11.64□□□□□ -0.55
ITGB1-207ENST00000439974 BPIFA4PQ86YQ2 179 aa11.64□□□□□ -0.55
ITGB1-207ENST00000439974 Q8NAQ8 132 aa11.64□□□□□ -0.55
ITGB1-207ENST00000439974 ZNF738Q8NE65 137 aa11.64□□□□□ -0.55
ITGB1-207ENST00000439974 C2CD4CQ8TF44 421 aa11.64□□□□□ -0.55
ITGB1-207ENST00000439974 AQP10Q96PS8 301 aa11.64□□□□□ -0.55
ITGB1-207ENST00000439974 RPRMQ9NS64 109 aa11.64□□□□□ -0.55
ITGB1-207ENST00000439974 HLA-DRB4X5D2U9 266 aa11.64□□□□□ -0.55
ITGB1-207ENST00000439974 RNF222A6NCQ9 220 aa11.63□□□□□ -0.55
ITGB1-207ENST00000439974 C17orf112F2Z3M2 114 aa11.63□□□□□ -0.55
ITGB1-207ENST00000439974 TCTAP57738 103 aa11.63□□□□□ -0.55
ITGB1-207ENST00000439974 EBLN2Q6P2I7 272 aa11.63□□□□□ -0.55
ITGB1-207ENST00000439974 SLC25A2Q9BXI2 301 aa11.63□□□□□ -0.55
ITGB1-207ENST00000439974 HRH4Q9H3N8 390 aa11.63□□□□□ -0.55
ITGB1-207ENST00000439974 XCL2Q9UBD3 114 aa11.63□□□□□ -0.55
ITGB1-207ENST00000439974 A0A0J9YX75 114 aa11.62□□□□□ -0.55
ITGB1-207ENST00000439974 ZNF705FA8MVS1 300 aaPredicted RBP11.62□□□□□ -0.55
ITGB1-207ENST00000439974 IGLC2P0DOY2 106 aa11.62□□□□□ -0.55
ITGB1-207ENST00000439974 HSD17B11Q8NBQ5 300 aa11.62□□□□□ -0.55
ITGB1-207ENST00000439974 SLC35B3Q9H1N7 401 aa11.62□□□□□ -0.55
ITGB1-207ENST00000439974 ZNF586Q9NXT0 402 aa11.62□□□□□ -0.55
ITGB1-207ENST00000439974 TNFSF18Q9UNG2 199 aa11.62□□□□□ -0.55
ITGB1-207ENST00000439974 IGHV4-28A0A0C4DH34 117 aa11.61□□□□□ -0.55
ITGB1-207ENST00000439974 C11orf94C9JXX5 98 aa11.61□□□□□ -0.55
ITGB1-207ENST00000439974 MIFP14174 115 aa11.61□□□□□ -0.55
ITGB1-207ENST00000439974 PSG3Q16557 428 aa11.61□□□□□ -0.55
ITGB1-207ENST00000439974 SAMD13Q5VXD3 122 aa11.61□□□□□ -0.55
ITGB1-207ENST00000439974 INO80EQ8NBZ0 244 aaPredicted RBP11.61□□□□□ -0.55
ITGB1-207ENST00000439974 BLNKQ8WV28 456 aa11.61□□□□□ -0.55
ITGB1-207ENST00000439974 ASB13Q8WXK3 278 aa11.61□□□□□ -0.55
ITGB1-207ENST00000439974 FAM167A-AS1Q96KT0 104 aa11.61□□□□□ -0.55
ITGB1-207ENST00000439974 ZNF331Q9NQX6 463 aaPredicted RBP11.61□□□□□ -0.55
ITGB1-207ENST00000439974 KCNIP2Q9NS61 270 aa11.61□□□□□ -0.55
ITGB1-207ENST00000439974 HERC2O95714 4834 aa11.61□□□□□ -0.55
ITGB1-207ENST00000439974 ZNF705EA8MWA4 302 aaPredicted RBP11.6□□□□□ -0.55
ITGB1-207ENST00000439974 PRAC2D3DTV9 90 aa11.6□□□□□ -0.55
ITGB1-207ENST00000439974 OR10J4P0C629 311 aa11.6□□□□□ -0.55
ITGB1-207ENST00000439974 RBMY1A1P0DJD3 496 aaKnown RBP11.6□□□□□ -0.55
ITGB1-207ENST00000439974 RBMY1CP0DJD4 496 aa11.6□□□□□ -0.55
ITGB1-207ENST00000439974 RAB2AP61019 212 aa11.6□□□□□ -0.55
ITGB1-207ENST00000439974 RBMY1FQ15415 496 aaKnown RBP11.6□□□□□ -0.55
ITGB1-207ENST00000439974 LCN15Q6UWW0 184 aa11.6□□□□□ -0.55
ITGB1-207ENST00000439974 RNF24Q9Y225 148 aa11.6□□□□□ -0.55
ITGB1-207ENST00000439974 FUT9Q9Y231 359 aa11.6□□□□□ -0.55
ITGB1-207ENST00000439974 ARPC5O15511 151 aa11.59□□□□□ -0.55
ITGB1-207ENST00000439974 CNN1P51911 297 aaKnown RBP11.59□□□□□ -0.55
ITGB1-207ENST00000439974 HIST1H1AQ02539 215 aaPredicted RBP11.59□□□□□ -0.55
ITGB1-207ENST00000439974 RPL7L1Q6DKI1 246 aaKnown RBP11.59□□□□□ -0.55
ITGB1-207ENST00000439974 RPUSD4Q96CM3 377 aaKnown RBP11.59□□□□□ -0.55
ITGB1-207ENST00000439974 SAT2Q96F10 170 aaPredicted RBP11.59□□□□□ -0.55
ITGB1-207ENST00000439974 PARD6GQ9BYG4 376 aaPredicted RBP11.59□□□□□ -0.55
ITGB1-207ENST00000439974 SH3BGRL3Q9H299 93 aa11.59□□□□□ -0.55
ITGB1-207ENST00000439974 X6R8D5 127 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms