RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 CECR9P0C854 216 aa6.83□□□□□ -1.32
HPS4-206ENST00000439453 FA2HQ7L5A8 372 aa6.83□□□□□ -1.32
HPS4-206ENST00000439453 BHLHA15Q7RTS1 189 aaPredicted RBP6.83□□□□□ -1.32
HPS4-206ENST00000439453 STXBP6Q8NFX7 210 aa6.83□□□□□ -1.32
HPS4-206ENST00000439453 DPF1Q92782 380 aa6.83□□□□□ -1.32
HPS4-206ENST00000439453 TANC2Q9HCD6 1990 aa6.83□□□□□ -1.32
HPS4-206ENST00000439453 ANKHD1Q8IWZ3 2542 aaKnown RBP6.83□□□□□ -1.32
HPS4-206ENST00000439453 GNG7O60262 68 aa6.83□□□□□ -1.32
HPS4-206ENST00000439453 SPRNQ5BIV9 151 aa6.83□□□□□ -1.32
HPS4-206ENST00000439453 MBNL2Q5VZF2 373 aaKnown RBP6.83□□□□□ -1.32
HPS4-206ENST00000439453 THAP8Q8NA92 274 aa6.83□□□□□ -1.32
HPS4-206ENST00000439453 PERPQ96FX8 193 aa6.83□□□□□ -1.32
HPS4-206ENST00000439453 DSCAMO60469 2012 aa6.83□□□□□ -1.32
HPS4-206ENST00000439453 A0A1W2PPR1 153 aa6.83□□□□□ -1.32
HPS4-206ENST00000439453 E7EUB6 86 aa6.83□□□□□ -1.32
HPS4-206ENST00000439453 CSN1S1P47710 185 aa6.83□□□□□ -1.32
HPS4-206ENST00000439453 Q6ZT83 130 aa6.83□□□□□ -1.32
HPS4-206ENST00000439453 OR1N2Q8NGR9 330 aa6.83□□□□□ -1.32
HPS4-206ENST00000439453 TMEM186Q96B77 213 aa6.83□□□□□ -1.32
HPS4-206ENST00000439453 ZNRD1Q9P1U0 126 aa6.83□□□□□ -1.32
HPS4-206ENST00000439453 NPIPB6E9PJ23 425 aa6.82□□□□□ -1.32
HPS4-206ENST00000439453 TCRAP04437 139 aa6.82□□□□□ -1.32
HPS4-206ENST00000439453 ORM2P19652 201 aa6.82□□□□□ -1.32
HPS4-206ENST00000439453 HSD52Q0P140 79 aa6.82□□□□□ -1.32
HPS4-206ENST00000439453 MOGAT3Q86VF5 341 aa6.82□□□□□ -1.32
HPS4-206ENST00000439453 PRSS3P2Q8NHM4 247 aa6.82□□□□□ -1.32
HPS4-206ENST00000439453 VSTM2AQ8TAG5 236 aa6.82□□□□□ -1.32
HPS4-206ENST00000439453 MRPL36Q9P0J6 103 aaKnown RBP6.82□□□□□ -1.32
HPS4-206ENST00000439453 PROCRQ9UNN8 238 aa6.82□□□□□ -1.32
HPS4-206ENST00000439453 CFHR2P36980 270 aa6.82□□□□□ -1.32
HPS4-206ENST00000439453 KRTAP10-9P60411 292 aa6.82□□□□□ -1.32
HPS4-206ENST00000439453 FAM201AQ5SY85 155 aa6.82□□□□□ -1.32
HPS4-206ENST00000439453 BOD1L2Q8IYS8 172 aa6.82□□□□□ -1.32
HPS4-206ENST00000439453 A0A1B0GV72 72 aa6.82□□□□□ -1.32
HPS4-206ENST00000439453 LGALS7P47929 136 aa6.82□□□□□ -1.32
HPS4-206ENST00000439453 DUX4L9Q6RFH8 374 aaPredicted RBP6.82□□□□□ -1.32
HPS4-206ENST00000439453 OR5AN1Q8NGI8 311 aa6.82□□□□□ -1.32
HPS4-206ENST00000439453 OR5A1Q8NGJ0 315 aa6.82□□□□□ -1.32
HPS4-206ENST00000439453 NPFFR1Q9GZQ6 430 aa6.82□□□□□ -1.32
HPS4-206ENST00000439453 SERTM2A0A1B0GWG4 89 aa6.82□□□□□ -1.32
HPS4-206ENST00000439453 INS-IGF2F8WCM5 200 aa6.82□□□□□ -1.32
HPS4-206ENST00000439453 H3BTX0 84 aa6.82□□□□□ -1.32
HPS4-206ENST00000439453 APOBEC3AP31941 199 aaPredicted RBP6.82□□□□□ -1.32
HPS4-206ENST00000439453 WT1-ASQ06250 92 aa6.82□□□□□ -1.32
HPS4-206ENST00000439453 SAMD13Q5VXD3 122 aa6.82□□□□□ -1.32
HPS4-206ENST00000439453 SLC25A48Q6ZT89 311 aaKnown RBP6.82□□□□□ -1.32
HPS4-206ENST00000439453 CIARTQ8N365 385 aaPredicted RBP6.82□□□□□ -1.32
HPS4-206ENST00000439453 OR8A1Q8NGG7 326 aa6.82□□□□□ -1.32
HPS4-206ENST00000439453 LINC01560Q8TB33 94 aa6.82□□□□□ -1.32
HPS4-206ENST00000439453 HARBI1Q96MB7 349 aa6.82□□□□□ -1.32
HPS4-206ENST00000439453 Q9H3A6 140 aa6.82□□□□□ -1.32
HPS4-206ENST00000439453 SPCS1Q9Y6A9 102 aa6.82□□□□□ -1.32
HPS4-206ENST00000439453 ABCA12Q86UK0 2595 aa6.81□□□□□ -1.32
HPS4-206ENST00000439453 OVOL3O00110 214 aa6.81□□□□□ -1.32
HPS4-206ENST00000439453 PIP4P2Q8N4L2 257 aa6.81□□□□□ -1.32
HPS4-206ENST00000439453 OSR1Q8TAX0 266 aaPredicted RBP6.81□□□□□ -1.32
HPS4-206ENST00000439453 THYN1Q9P016 225 aa6.81□□□□□ -1.32
HPS4-206ENST00000439453 PLCE1Q9P212 2302 aa6.81□□□□□ -1.32
HPS4-206ENST00000439453 ARFGEF3Q5TH69 2177 aa6.81□□□□□ -1.32
HPS4-206ENST00000439453 A0A1B0GUT8 65 aa6.81□□□□□ -1.32
HPS4-206ENST00000439453 A0A1W2PPM0 123 aa6.81□□□□□ -1.32
HPS4-206ENST00000439453 SMAD7O15105 426 aaKnown RBP6.81□□□□□ -1.32
HPS4-206ENST00000439453 Q86TA4 180 aa6.81□□□□□ -1.32
HPS4-206ENST00000439453 ZCCHC24Q8N2G6 241 aaKnown RBP6.81□□□□□ -1.32
HPS4-206ENST00000439453 TMEM116Q8NCL8 245 aa6.81□□□□□ -1.32
HPS4-206ENST00000439453 OR9G4Q8NGQ1 327 aa6.81□□□□□ -1.32
HPS4-206ENST00000439453 ROS1P08922 2347 aa6.81□□□□□ -1.32
HPS4-206ENST00000439453 AKAP6Q13023 2319 aa6.81□□□□□ -1.32
HPS4-206ENST00000439453 NAV3Q8IVL0 2385 aa6.81□□□□□ -1.32
HPS4-206ENST00000439453 LHBP01229 141 aa6.81□□□□□ -1.32
HPS4-206ENST00000439453 SUB1P53999 127 aaKnown RBP eCLIP6.81□□□□□ -1.32
HPS4-206ENST00000439453 RIGQ13278 110 aa6.81□□□□□ -1.32
HPS4-206ENST00000439453 ADAMTSL5Q6ZMM2 481 aa6.81□□□□□ -1.32
HPS4-206ENST00000439453 OR4A5Q8NH83 315 aa6.81□□□□□ -1.32
HPS4-206ENST00000439453 FAM222BQ8WU58 562 aa6.81□□□□□ -1.32
HPS4-206ENST00000439453 MRPL20Q9BYC9 149 aaKnown RBP6.81□□□□□ -1.32
HPS4-206ENST00000439453 TRAV8-1A0A0A6YYK1 113 aa6.8□□□□□ -1.32
HPS4-206ENST00000439453 CGB1A6NKQ9 187 aa6.8□□□□□ -1.32
HPS4-206ENST00000439453 ARMS2P0C7Q2 107 aa6.8□□□□□ -1.32
HPS4-206ENST00000439453 FAM106CPP0CH98 169 aa6.8□□□□□ -1.32
HPS4-206ENST00000439453 SMIM17P0DL12 118 aa6.8□□□□□ -1.32
HPS4-206ENST00000439453 MSMPQ1L6U9 139 aa6.8□□□□□ -1.32
HPS4-206ENST00000439453 FAM106AQ4KMX7 169 aa6.8□□□□□ -1.32
HPS4-206ENST00000439453 C10orf55Q5SWW7 151 aa6.8□□□□□ -1.32
HPS4-206ENST00000439453 C16orf54Q6UWD8 224 aa6.8□□□□□ -1.32
HPS4-206ENST00000439453 OR4X2Q8NGF9 303 aa6.8□□□□□ -1.32
HPS4-206ENST00000439453 IGHV1-18A0A0C4DH31 117 aa6.8□□□□□ -1.32
HPS4-206ENST00000439453 hADV38S2A0JD32 116 aa6.8□□□□□ -1.32
HPS4-206ENST00000439453 C22orf46C9J442 243 aa6.8□□□□□ -1.32
HPS4-206ENST00000439453 SIVA1O15304 175 aa6.8□□□□□ -1.32
HPS4-206ENST00000439453 FABP2P12104 132 aa6.8□□□□□ -1.32
HPS4-206ENST00000439453 GP9P14770 177 aa6.8□□□□□ -1.32
HPS4-206ENST00000439453 CEACAM3P40198 252 aa6.8□□□□□ -1.32
HPS4-206ENST00000439453 SMAGPQ0VAQ4 97 aa6.8□□□□□ -1.32
HPS4-206ENST00000439453 LGALS9BQ3B8N2 356 aa6.8□□□□□ -1.32
HPS4-206ENST00000439453 LGALS9CQ6DKI2 356 aa6.8□□□□□ -1.32
HPS4-206ENST00000439453 TMEM108Q6UXF1 575 aa6.8□□□□□ -1.32
HPS4-206ENST00000439453 RPUSD1Q9UJJ7 312 aaKnown RBP6.8□□□□□ -1.32
HPS4-206ENST00000439453 A0A096LNJ9 63 aa6.8□□□□□ -1.32
HPS4-206ENST00000439453 IGLV1-44P01699 117 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms