RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 A0A1B0GUT8 65 aa10.77□□□□□ -0.69
PCNX3-202ENST00000439247 K7EMI3 77 aa10.77□□□□□ -0.69
PCNX3-202ENST00000439247 CACNG7P62955 275 aa10.77□□□□□ -0.69
PCNX3-202ENST00000439247 MRGPRG-AS1Q2M3A8 158 aa10.77□□□□□ -0.69
PCNX3-202ENST00000439247 NBASA2RRP1 2371 aa10.76□□□□□ -0.69
PCNX3-202ENST00000439247 C9orf118A6NHY6 69 aa10.76□□□□□ -0.69
PCNX3-202ENST00000439247 NPIPB6E9PJ23 425 aa10.76□□□□□ -0.69
PCNX3-202ENST00000439247 SEM1Q6ZVN7 128 aa10.76□□□□□ -0.69
PCNX3-202ENST00000439247 OR4C13Q8NGP0 309 aa10.76□□□□□ -0.69
PCNX3-202ENST00000439247 TTTY13Q9BZ97 58 aa10.76□□□□□ -0.69
PCNX3-202ENST00000439247 GFRA4Q9GZZ7 299 aa10.76□□□□□ -0.69
PCNX3-202ENST00000439247 SOX21Q9Y651 276 aaPredicted RBP10.76□□□□□ -0.69
PCNX3-202ENST00000439247 A0A0G2JLM5 398 aa10.76□□□□□ -0.69
PCNX3-202ENST00000439247 TMEM213A2RRL7 107 aa10.76□□□□□ -0.69
PCNX3-202ENST00000439247 SUB1P53999 127 aaKnown RBP eCLIP10.76□□□□□ -0.69
PCNX3-202ENST00000439247 OR1N2Q8NGR9 330 aa10.76□□□□□ -0.69
PCNX3-202ENST00000439247 RAB9BQ9NP90 201 aa10.76□□□□□ -0.69
PCNX3-202ENST00000439247 D6R8Y8 96 aa10.75□□□□□ -0.69
PCNX3-202ENST00000439247 TNFRSF1AP19438 455 aa10.75□□□□□ -0.69
PCNX3-202ENST00000439247 NMUP48645 174 aa10.75□□□□□ -0.69
PCNX3-202ENST00000439247 CRIP1P50238 77 aa10.75□□□□□ -0.69
PCNX3-202ENST00000439247 OR10AG1Q8NH19 301 aa10.75□□□□□ -0.69
PCNX3-202ENST00000439247 OR4A5Q8NH83 315 aa10.75□□□□□ -0.69
PCNX3-202ENST00000439247 G3V4G9 280 aa10.75□□□□□ -0.69
PCNX3-202ENST00000439247 SMKR1H3BMG3 65 aa10.75□□□□□ -0.69
PCNX3-202ENST00000439247 TMEM200BQ69YZ2 307 aa10.75□□□□□ -0.69
PCNX3-202ENST00000439247 ZNF474Q6S9Z5 364 aaPredicted RBP10.75□□□□□ -0.69
PCNX3-202ENST00000439247 STXBP6Q8NFX7 210 aa10.75□□□□□ -0.69
PCNX3-202ENST00000439247 SMIM12Q96EX1 92 aa10.75□□□□□ -0.69
PCNX3-202ENST00000439247 PCNX1Q96RV3 2341 aa10.75□□□□□ -0.69
PCNX3-202ENST00000439247 ZNF207O43670 478 aaKnown RBP10.75□□□□□ -0.69
PCNX3-202ENST00000439247 SEC11AP67812 179 aa10.75□□□□□ -0.69
PCNX3-202ENST00000439247 SIGLEC8Q9NYZ4 499 aa10.75□□□□□ -0.69
PCNX3-202ENST00000439247 GLRXP35754 106 aa10.74□□□□□ -0.69
PCNX3-202ENST00000439247 PAX2Q02962 417 aa10.74□□□□□ -0.69
PCNX3-202ENST00000439247 AMN1Q8IY45 258 aa10.74□□□□□ -0.69
PCNX3-202ENST00000439247 C8orf49Q96NF6 230 aa10.74□□□□□ -0.69
PCNX3-202ENST00000439247 INSIG2Q9Y5U4 225 aa10.74□□□□□ -0.69
PCNX3-202ENST00000439247 ZGRF1Q86YA3 2104 aa10.74□□□□□ -0.69
PCNX3-202ENST00000439247 M0R3E3 92 aa10.74□□□□□ -0.69
PCNX3-202ENST00000439247 CSN1S1P47710 185 aa10.74□□□□□ -0.69
PCNX3-202ENST00000439247 MEF2CQ06413 473 aaPredicted RBP10.74□□□□□ -0.69
PCNX3-202ENST00000439247 OR2K2Q8NGT1 345 aa10.74□□□□□ -0.69
PCNX3-202ENST00000439247 LINC00574Q9H8X3 128 aa10.74□□□□□ -0.69
PCNX3-202ENST00000439247 K7EP34 96 aa10.73□□□□□ -0.69
PCNX3-202ENST00000439247 GTF2H5Q6ZYL4 71 aa10.73□□□□□ -0.69
PCNX3-202ENST00000439247 LINC00312Q9Y6C7 94 aa10.73□□□□□ -0.69
PCNX3-202ENST00000439247 S4R3C0 116 aa10.73□□□□□ -0.69
PCNX3-202ENST00000439247 MALRD1Q5VYJ5 2156 aa10.73□□□□□ -0.69
PCNX3-202ENST00000439247 H3BRM9 83 aa10.73□□□□□ -0.69
PCNX3-202ENST00000439247 LYPD2Q6UXB3 125 aa10.73□□□□□ -0.69
PCNX3-202ENST00000439247 C8orf46Q8TAG6 207 aa10.73□□□□□ -0.69
PCNX3-202ENST00000439247 NCOR1P1Q9H4R4 102 aa10.73□□□□□ -0.69
PCNX3-202ENST00000439247 FBLL1A6NHQ2 334 aaKnown RBP10.73□□□□□ -0.69
PCNX3-202ENST00000439247 UCNP55089 124 aa10.73□□□□□ -0.69
PCNX3-202ENST00000439247 BCL6BQ8N143 479 aaPredicted RBP10.73□□□□□ -0.69
PCNX3-202ENST00000439247 C18orf15Q96N68 181 aa10.73□□□□□ -0.69
PCNX3-202ENST00000439247 SLC25A39Q9BZJ4 359 aaPredicted RBP10.73□□□□□ -0.69
PCNX3-202ENST00000439247 DKK2Q9UBU2 259 aa10.73□□□□□ -0.69
PCNX3-202ENST00000439247 HIGD1AQ9Y241 93 aa10.73□□□□□ -0.69
PCNX3-202ENST00000439247 IGLV3-9A0A075B6K5 115 aa10.72□□□□□ -0.69
PCNX3-202ENST00000439247 RBP4P02753 201 aa10.72□□□□□ -0.69
PCNX3-202ENST00000439247 CRYGCP07315 174 aa10.72□□□□□ -0.69
PCNX3-202ENST00000439247 BOD1L2Q8IYS8 172 aa10.72□□□□□ -0.69
PCNX3-202ENST00000439247 TRGV9Q99603 122 aa10.72□□□□□ -0.69
PCNX3-202ENST00000439247 SPCS1Q9Y6A9 102 aa10.72□□□□□ -0.69
PCNX3-202ENST00000439247 A1L4Q6 167 aa10.72□□□□□ -0.69
PCNX3-202ENST00000439247 INS-IGF2F8WCM5 200 aa10.72□□□□□ -0.69
PCNX3-202ENST00000439247 GATA4P43694 442 aa10.72□□□□□ -0.69
PCNX3-202ENST00000439247 ADAMTSL5Q6ZMM2 481 aa10.72□□□□□ -0.69
PCNX3-202ENST00000439247 J3KRW8 73 aa10.71□□□□□ -0.69
PCNX3-202ENST00000439247 K7ERJ3 54 aa10.71□□□□□ -0.69
PCNX3-202ENST00000439247 SMAD7O15105 426 aaKnown RBP10.71□□□□□ -0.69
PCNX3-202ENST00000439247 RIGQ13278 110 aa10.71□□□□□ -0.69
PCNX3-202ENST00000439247 TIMM23BQ5SRD1 257 aa10.71□□□□□ -0.69
PCNX3-202ENST00000439247 VSTM2AQ8TAG5 236 aa10.71□□□□□ -0.69
PCNX3-202ENST00000439247 IGFBPL1Q8WX77 278 aa10.71□□□□□ -0.69
PCNX3-202ENST00000439247 TMEM133Q9H2Q1 129 aa10.71□□□□□ -0.69
PCNX3-202ENST00000439247 OTORQ9NRC9 128 aa10.71□□□□□ -0.69
PCNX3-202ENST00000439247 FAM215AQ9Y5M1 114 aa10.71□□□□□ -0.69
PCNX3-202ENST00000439247 A6NDN8 102 aa10.71□□□□□ -0.69
PCNX3-202ENST00000439247 APOBEC3AP31941 199 aaPredicted RBP10.71□□□□□ -0.69
PCNX3-202ENST00000439247 FAM27E3Q08E93 113 aa10.71□□□□□ -0.69
PCNX3-202ENST00000439247 LYZL1Q6UWQ5 148 aa10.71□□□□□ -0.69
PCNX3-202ENST00000439247 COL6A6A6NMZ7 2263 aa10.71□□□□□ -0.7
PCNX3-202ENST00000439247 LRBAP50851 2863 aa10.71□□□□□ -0.7
PCNX3-202ENST00000439247 DCHS2Q6V1P9 2916 aa10.71□□□□□ -0.7
PCNX3-202ENST00000439247 B9A039 149 aa10.71□□□□□ -0.7
PCNX3-202ENST00000439247 GNG7O60262 68 aa10.71□□□□□ -0.7
PCNX3-202ENST00000439247 GAS8-AS1O95177 125 aa10.7□□□□□ -0.7
PCNX3-202ENST00000439247 RPL24P83731 157 aaKnown RBP10.7□□□□□ -0.7
PCNX3-202ENST00000439247 LY6DQ14210 128 aa10.7□□□□□ -0.7
PCNX3-202ENST00000439247 NEGR1Q7Z3B1 354 aa10.7□□□□□ -0.7
PCNX3-202ENST00000439247 VMA21Q3ZAQ7 101 aa10.7□□□□□ -0.7
PCNX3-202ENST00000439247 PRELID3AQ96N28 172 aa10.7□□□□□ -0.7
PCNX3-202ENST00000439247 NPFFR1Q9GZQ6 430 aa10.7□□□□□ -0.7
PCNX3-202ENST00000439247 PSG8Q9UQ74 426 aa10.7□□□□□ -0.7
PCNX3-202ENST00000439247 USP24Q9UPU5 2620 aa10.7□□□□□ -0.7
PCNX3-202ENST00000439247 IGKV2D-26A0A0A0MRZ7 120 aa10.69□□□□□ -0.7
PCNX3-202ENST00000439247 A0A1W2PPM0 123 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms