RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 TMEM37Q8WXS4 190 aa6.84□□□□□ -1.31
AC011228.1-201ENST00000439027 C20orf24Q9BUV8 137 aa6.84□□□□□ -1.31
AC011228.1-201ENST00000439027 A0A1W2PPV4 95 aa6.83□□□□□ -1.32
AC011228.1-201ENST00000439027 ZNF705EA8MWA4 302 aaPredicted RBP6.83□□□□□ -1.32
AC011228.1-201ENST00000439027 PAX4O43316 350 aa6.83□□□□□ -1.32
AC011228.1-201ENST00000439027 ZNF207O43670 478 aaKnown RBP6.83□□□□□ -1.32
AC011228.1-201ENST00000439027 EIF3GO75821 320 aaKnown RBP eCLIP6.83□□□□□ -1.32
AC011228.1-201ENST00000439027 APOC4P55056 127 aa6.83□□□□□ -1.32
AC011228.1-201ENST00000439027 PLP1P60201 277 aa6.83□□□□□ -1.32
AC011228.1-201ENST00000439027 RHOBP62745 196 aa6.83□□□□□ -1.32
AC011228.1-201ENST00000439027 USF2Q15853 346 aaPredicted RBP6.83□□□□□ -1.32
AC011228.1-201ENST00000439027 FAM78BQ5VT40 261 aa6.83□□□□□ -1.32
AC011228.1-201ENST00000439027 SPATA31B1PQ5VZV4 182 aa6.83□□□□□ -1.32
AC011228.1-201ENST00000439027 GATAD1Q8WUU5 269 aa6.83□□□□□ -1.32
AC011228.1-201ENST00000439027 TMEM190Q8WZ59 177 aa6.83□□□□□ -1.32
AC011228.1-201ENST00000439027 RAB24Q969Q5 203 aa6.83□□□□□ -1.32
AC011228.1-201ENST00000439027 UHRF2Q96PU4 802 aa6.83□□□□□ -1.32
AC011228.1-201ENST00000439027 PFDN5Q99471 154 aa6.83□□□□□ -1.32
AC011228.1-201ENST00000439027 ACTR3CQ9C0K3 210 aaPredicted RBP6.83□□□□□ -1.32
AC011228.1-201ENST00000439027 SLC25A22Q9H936 323 aa6.83□□□□□ -1.32
AC011228.1-201ENST00000439027 SEPSECSQ9HD40 501 aaKnown RBP6.83□□□□□ -1.32
AC011228.1-201ENST00000439027 HIGD1AQ9Y241 93 aa6.83□□□□□ -1.32
AC011228.1-201ENST00000439027 A0A0J9YWU9 116 aa6.82□□□□□ -1.32
AC011228.1-201ENST00000439027 RGS13O14921 159 aa6.82□□□□□ -1.32
AC011228.1-201ENST00000439027 HMGB3O15347 200 aaKnown RBP6.82□□□□□ -1.32
AC011228.1-201ENST00000439027 SPRY2O43597 315 aa6.82□□□□□ -1.32
AC011228.1-201ENST00000439027 LY6G6CO95867 125 aa6.82□□□□□ -1.32
AC011228.1-201ENST00000439027 RPL35AP18077 110 aaKnown RBP6.82□□□□□ -1.32
AC011228.1-201ENST00000439027 CDC34P49427 236 aaPredicted RBP6.82□□□□□ -1.32
AC011228.1-201ENST00000439027 BLOC1S1P78537 153 aa6.82□□□□□ -1.32
AC011228.1-201ENST00000439027 ZNF726P1Q15940 193 aa6.82□□□□□ -1.32
AC011228.1-201ENST00000439027 LCN15Q6UWW0 184 aa6.82□□□□□ -1.32
AC011228.1-201ENST00000439027 DPPA3Q6W0C5 159 aa6.82□□□□□ -1.32
AC011228.1-201ENST00000439027 SSX7Q7RTT5 188 aa6.82□□□□□ -1.32
AC011228.1-201ENST00000439027 LINC00305Q7Z4B0 112 aa6.82□□□□□ -1.32
AC011228.1-201ENST00000439027 RNF2Q99496 336 aa6.82□□□□□ -1.32
AC011228.1-201ENST00000439027 SPAG8Q99932 426 aaPredicted RBP6.82□□□□□ -1.32
AC011228.1-201ENST00000439027 SLC25A39Q9BZJ4 359 aaPredicted RBP6.82□□□□□ -1.32
AC011228.1-201ENST00000439027 DAZ1Q9NQZ3 744 aaKnown RBP6.82□□□□□ -1.32
AC011228.1-201ENST00000439027 RABAC1Q9UI14 185 aa6.82□□□□□ -1.32
AC011228.1-201ENST00000439027 FUT9Q9Y231 359 aa6.82□□□□□ -1.32
AC011228.1-201ENST00000439027 IGHV3-49A0A0A0MS15 119 aa6.81□□□□□ -1.32
AC011228.1-201ENST00000439027 TRAV5A0A0B4J249 113 aa6.81□□□□□ -1.32
AC011228.1-201ENST00000439027 CTXND1A0A1B0GTU2 59 aa6.81□□□□□ -1.32
AC011228.1-201ENST00000439027 A0A1B0GV50 99 aa6.81□□□□□ -1.32
AC011228.1-201ENST00000439027 TSPAN4O14817 238 aa6.81□□□□□ -1.32
AC011228.1-201ENST00000439027 NMBP08949 121 aa6.81□□□□□ -1.32
AC011228.1-201ENST00000439027 NPPCP23582 126 aa6.81□□□□□ -1.32
AC011228.1-201ENST00000439027 BMI1P35226 326 aa6.81□□□□□ -1.32
AC011228.1-201ENST00000439027 RAB14P61106 215 aa6.81□□□□□ -1.32
AC011228.1-201ENST00000439027 DEFB135Q30KP9 77 aa6.81□□□□□ -1.32
AC011228.1-201ENST00000439027 MORN5Q5VZ52 161 aa6.81□□□□□ -1.32
AC011228.1-201ENST00000439027 LEMD1Q68G75 181 aa6.81□□□□□ -1.32
AC011228.1-201ENST00000439027 MIR17HGQ75NE6 70 aa6.81□□□□□ -1.32
AC011228.1-201ENST00000439027 S100A7AQ86SG5 101 aa6.81□□□□□ -1.32
AC011228.1-201ENST00000439027 LRRC20Q8TCA0 184 aa6.81□□□□□ -1.32
AC011228.1-201ENST00000439027 SFT2D1Q8WV19 159 aa6.81□□□□□ -1.32
AC011228.1-201ENST00000439027 SAT2Q96F10 170 aaPredicted RBP6.81□□□□□ -1.32
AC011228.1-201ENST00000439027 METTL26Q96S19 204 aa6.81□□□□□ -1.32
AC011228.1-201ENST00000439027 SCRT1Q9BWW7 348 aa6.81□□□□□ -1.32
AC011228.1-201ENST00000439027 IGHV3OR16-13A0A075B7E8 117 aa6.8□□□□□ -1.32
AC011228.1-201ENST00000439027 IGHV3-74A0A0B4J1X5 117 aa6.8□□□□□ -1.32
AC011228.1-201ENST00000439027 IGHV3-66A0A0C4DH42 116 aa6.8□□□□□ -1.32
AC011228.1-201ENST00000439027 MAP1LC3B2A6NCE7 125 aa6.8□□□□□ -1.32
AC011228.1-201ENST00000439027 OR4C46A6NHA9 309 aa6.8□□□□□ -1.32
AC011228.1-201ENST00000439027 H3BRN7 92 aa6.8□□□□□ -1.32
AC011228.1-201ENST00000439027 K7EMT4 169 aa6.8□□□□□ -1.32
AC011228.1-201ENST00000439027 UBE2CO00762 179 aa6.8□□□□□ -1.32
AC011228.1-201ENST00000439027 CRYBB3P26998 211 aa6.8□□□□□ -1.32
AC011228.1-201ENST00000439027 S100A7P31151 101 aa6.8□□□□□ -1.32
AC011228.1-201ENST00000439027 TFPI2P48307 235 aa6.8□□□□□ -1.32
AC011228.1-201ENST00000439027 Q6ZWC4 215 aa6.8□□□□□ -1.32
AC011228.1-201ENST00000439027 MBD3L1Q8WWY6 194 aa6.8□□□□□ -1.32
AC011228.1-201ENST00000439027 LINC00476Q8WZB0 136 aa6.8□□□□□ -1.32
AC011228.1-201ENST00000439027 KRTAP4-12Q9BQ66 201 aa6.8□□□□□ -1.32
AC011228.1-201ENST00000439027 SHANK2-AS3Q9BTD1 123 aa6.8□□□□□ -1.32
AC011228.1-201ENST00000439027 SLC25A2Q9BXI2 301 aa6.8□□□□□ -1.32
AC011228.1-201ENST00000439027 MRPL32Q9BYC8 188 aaKnown RBP6.8□□□□□ -1.32
AC011228.1-201ENST00000439027 MAP1LC3BQ9GZQ8 125 aa6.8□□□□□ -1.32
AC011228.1-201ENST00000439027 HRH4Q9H3N8 390 aa6.8□□□□□ -1.32
AC011228.1-201ENST00000439027 PFDN2Q9UHV9 154 aa6.8□□□□□ -1.32
AC011228.1-201ENST00000439027 TP53TG1Q9Y2A0 90 aa6.8□□□□□ -1.32
AC011228.1-201ENST00000439027 IGKV3-7A0A075B6H7 116 aa6.79□□□□□ -1.32
AC011228.1-201ENST00000439027 NUPR2A6NF83 97 aa6.79□□□□□ -1.32
AC011228.1-201ENST00000439027 ZNF98A6NK75 572 aa6.79□□□□□ -1.32
AC011228.1-201ENST00000439027 OR7C2O60412 319 aa6.79□□□□□ -1.32
AC011228.1-201ENST00000439027 APOHP02749 345 aaPredicted RBP6.79□□□□□ -1.32
AC011228.1-201ENST00000439027 STAG3L2P0CL84 134 aa6.79□□□□□ -1.32
AC011228.1-201ENST00000439027 STAG3L3P0CL85 134 aa6.79□□□□□ -1.32
AC011228.1-201ENST00000439027 FGF8P55075 233 aaPredicted RBP6.79□□□□□ -1.32
AC011228.1-201ENST00000439027 TAS2R45P59539 299 aa6.79□□□□□ -1.32
AC011228.1-201ENST00000439027 CCL20P78556 96 aa6.79□□□□□ -1.32
AC011228.1-201ENST00000439027 ODF3L2Q3SX64 289 aa6.79□□□□□ -1.32
AC011228.1-201ENST00000439027 KHDC3LQ587J8 217 aa6.79□□□□□ -1.32
AC011228.1-201ENST00000439027 CEMP1Q6PRD7 247 aaPredicted RBP6.79□□□□□ -1.32
AC011228.1-201ENST00000439027 WFDC3Q8IUB2 231 aa6.79□□□□□ -1.32
AC011228.1-201ENST00000439027 IQCF2Q8IXL9 164 aa6.79□□□□□ -1.32
AC011228.1-201ENST00000439027 RNF183Q96D59 192 aa6.79□□□□□ -1.32
AC011228.1-201ENST00000439027 NARS2Q96I59 477 aaKnown RBP6.79□□□□□ -1.32
AC011228.1-201ENST00000439027 FAM167A-AS1Q96KT0 104 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms