RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 NBR2O15453 112 aa10.95□□□□□ -0.66
PTCHD3-201ENST00000438700 GP9P14770 177 aa10.95□□□□□ -0.66
PTCHD3-201ENST00000438700 MYCNOSP40205 109 aa10.95□□□□□ -0.66
PTCHD3-201ENST00000438700 UBE2G1P62253 170 aa10.95□□□□□ -0.66
PTCHD3-201ENST00000438700 KLF17Q5JT82 389 aaPredicted RBP10.95□□□□□ -0.66
PTCHD3-201ENST00000438700 DYNAPQ8N1N2 210 aa10.95□□□□□ -0.66
PTCHD3-201ENST00000438700 RASL11BQ9BPW5 248 aa10.95□□□□□ -0.66
PTCHD3-201ENST00000438700 ALKBH7Q9BT30 221 aaPredicted RBP10.95□□□□□ -0.66
PTCHD3-201ENST00000438700 EPDR1Q9UM22 224 aa10.95□□□□□ -0.66
PTCHD3-201ENST00000438700 LINC00173Q6ZV60 143 aa10.94□□□□□ -0.66
PTCHD3-201ENST00000438700 ZNF738Q8NE65 137 aa10.94□□□□□ -0.66
PTCHD3-201ENST00000438700 NUP35Q8NFH5 326 aa10.94□□□□□ -0.66
PTCHD3-201ENST00000438700 URB1-AS1Q96HZ7 61 aa10.94□□□□□ -0.66
PTCHD3-201ENST00000438700 MCRIP2Q9BUT9 160 aaKnown RBP10.94□□□□□ -0.66
PTCHD3-201ENST00000438700 HIGD1AQ9Y241 93 aa10.94□□□□□ -0.66
PTCHD3-201ENST00000438700 CENPEQ02224 2701 aa10.94□□□□□ -0.66
PTCHD3-201ENST00000438700 IGHV4-30-2A0A087WSY4 118 aa10.94□□□□□ -0.66
PTCHD3-201ENST00000438700 C2orf70A6NJV1 201 aa10.94□□□□□ -0.66
PTCHD3-201ENST00000438700 NDUFS8O00217 210 aa10.94□□□□□ -0.66
PTCHD3-201ENST00000438700 TOMM40O96008 361 aa10.94□□□□□ -0.66
PTCHD3-201ENST00000438700 PRB4P10163 310 aaPredicted RBP10.94□□□□□ -0.66
PTCHD3-201ENST00000438700 RNF5Q99942 180 aa10.94□□□□□ -0.66
PTCHD3-201ENST00000438700 NUDT10Q8NFP7 164 aa10.93□□□□□ -0.66
PTCHD3-201ENST00000438700 NUDT11Q96G61 164 aa10.93□□□□□ -0.66
PTCHD3-201ENST00000438700 MRPS16Q9Y3D3 137 aaKnown RBP10.93□□□□□ -0.66
PTCHD3-201ENST00000438700 TRAV9-2A0A087WT02 112 aa10.93□□□□□ -0.66
PTCHD3-201ENST00000438700 IGKV1-17P01599 117 aa10.93□□□□□ -0.66
PTCHD3-201ENST00000438700 MPV17L2Q567V2 206 aa10.93□□□□□ -0.66
PTCHD3-201ENST00000438700 MINOS1Q5TGZ0 78 aa10.93□□□□□ -0.66
PTCHD3-201ENST00000438700 Q9H3A6 140 aa10.93□□□□□ -0.66
PTCHD3-201ENST00000438700 MINOS1-NBL1R4GNA1 71 aa10.93□□□□□ -0.66
PTCHD3-201ENST00000438700 CELSR1Q9NYQ6 3014 aa10.92□□□□□ -0.66
PTCHD3-201ENST00000438700 K7EIM0 57 aa10.92□□□□□ -0.66
PTCHD3-201ENST00000438700 UBE2E1P51965 193 aa10.92□□□□□ -0.66
PTCHD3-201ENST00000438700 FOXA3P55318 350 aaPredicted RBP10.92□□□□□ -0.66
PTCHD3-201ENST00000438700 RPL19P84098 196 aaKnown RBP10.92□□□□□ -0.66
PTCHD3-201ENST00000438700 CCDC144NLQ6NUI1 221 aa10.92□□□□□ -0.66
PTCHD3-201ENST00000438700 SLC25A39Q9BZJ4 359 aaPredicted RBP10.92□□□□□ -0.66
PTCHD3-201ENST00000438700 FBN2P35556 2912 aa10.92□□□□□ -0.66
PTCHD3-201ENST00000438700 MAP1AP78559 2803 aaPredicted RBP10.92□□□□□ -0.66
PTCHD3-201ENST00000438700 COL8A1P27658 744 aa10.92□□□□□ -0.66
PTCHD3-201ENST00000438700 PLP1P60201 277 aa10.92□□□□□ -0.66
PTCHD3-201ENST00000438700 USP9YO00507 2555 aaPredicted RBP10.92□□□□□ -0.66
PTCHD3-201ENST00000438700 ANKRD17O75179 2603 aaKnown RBP10.91□□□□□ -0.66
PTCHD3-201ENST00000438700 hDV102S1A0JD36 115 aa10.91□□□□□ -0.66
PTCHD3-201ENST00000438700 NCBP2LA6PVI3 153 aaKnown RBP10.91□□□□□ -0.66
PTCHD3-201ENST00000438700 OR4C5Q8NGB2 326 aa10.91□□□□□ -0.66
PTCHD3-201ENST00000438700 ZC2HC1AQ96GY0 325 aa10.91□□□□□ -0.66
PTCHD3-201ENST00000438700 POLQO75417 2590 aa10.91□□□□□ -0.66
PTCHD3-201ENST00000438700 CELSR2Q9HCU4 2923 aa10.91□□□□□ -0.66
PTCHD3-201ENST00000438700 TRAV8-1A0A0A6YYK1 113 aa10.91□□□□□ -0.66
PTCHD3-201ENST00000438700 HIGD1CA8MV81 97 aa10.91□□□□□ -0.66
PTCHD3-201ENST00000438700 OOSP1A8MZH6 123 aa10.91□□□□□ -0.66
PTCHD3-201ENST00000438700 EXOC3-AS1Q8N2X6 119 aa10.91□□□□□ -0.66
PTCHD3-201ENST00000438700 C5orf17Q8NAS9 161 aa10.91□□□□□ -0.66
PTCHD3-201ENST00000438700 OR2D3Q8NGH3 330 aa10.91□□□□□ -0.66
PTCHD3-201ENST00000438700 MBD6Q96DN6 1003 aa10.91□□□□□ -0.66
PTCHD3-201ENST00000438700 MRPL27Q9P0M9 148 aaKnown RBP10.91□□□□□ -0.66
PTCHD3-201ENST00000438700 SAA4P35542 130 aa10.9□□□□□ -0.66
PTCHD3-201ENST00000438700 VAMP3Q15836 100 aa10.9□□□□□ -0.66
PTCHD3-201ENST00000438700 C5orf64Q2M2E5 130 aa10.9□□□□□ -0.66
PTCHD3-201ENST00000438700 TCF24Q7RTU0 167 aa10.9□□□□□ -0.66
PTCHD3-201ENST00000438700 C7orf69Q9H7B7 122 aa10.9□□□□□ -0.66
PTCHD3-201ENST00000438700 CSMD2Q7Z408 3487 aa10.9□□□□□ -0.66
PTCHD3-201ENST00000438700 PTPN13Q12923 2485 aa10.9□□□□□ -0.66
PTCHD3-201ENST00000438700 ZFHX3Q15911 3703 aa10.9□□□□□ -0.66
PTCHD3-201ENST00000438700 K7EP13 123 aa10.9□□□□□ -0.67
PTCHD3-201ENST00000438700 NDUFA3O95167 84 aa10.9□□□□□ -0.67
PTCHD3-201ENST00000438700 TCRAP04437 139 aa10.9□□□□□ -0.67
PTCHD3-201ENST00000438700 NDPQ00604 133 aa10.9□□□□□ -0.67
PTCHD3-201ENST00000438700 COX19Q49B96 90 aa10.9□□□□□ -0.67
PTCHD3-201ENST00000438700 LINC00322Q6ZN03 302 aaPredicted RBP10.9□□□□□ -0.67
PTCHD3-201ENST00000438700 FAM231DQ6ZW35 169 aa10.9□□□□□ -0.67
PTCHD3-201ENST00000438700 AJUBAQ96IF1 538 aa10.9□□□□□ -0.67
PTCHD3-201ENST00000438700 GPR82Q96P67 336 aa10.9□□□□□ -0.67
PTCHD3-201ENST00000438700 FOXE3Q13461 319 aa10.89□□□□□ -0.67
PTCHD3-201ENST00000438700 Q71RC1 249 aaPredicted RBP10.89□□□□□ -0.67
PTCHD3-201ENST00000438700 NPBQ8NG41 125 aa10.89□□□□□ -0.67
PTCHD3-201ENST00000438700 OR4C46A6NHA9 309 aa10.89□□□□□ -0.67
PTCHD3-201ENST00000438700 IL4P05112 153 aa10.89□□□□□ -0.67
PTCHD3-201ENST00000438700 CDKN1BP46527 198 aa10.89□□□□□ -0.67
PTCHD3-201ENST00000438700 PAX8Q06710 450 aa10.89□□□□□ -0.67
PTCHD3-201ENST00000438700 GRAMD2BQ96HH9 432 aa10.89□□□□□ -0.67
PTCHD3-201ENST00000438700 C17orf77Q96MU5 243 aa10.89□□□□□ -0.67
PTCHD3-201ENST00000438700 KLF12Q9Y4X4 402 aa10.89□□□□□ -0.67
PTCHD3-201ENST00000438700 SELENOKQ9Y6D0 94 aa10.89□□□□□ -0.67
PTCHD3-201ENST00000438700 OR2T8A6NH00 312 aa10.88□□□□□ -0.67
PTCHD3-201ENST00000438700 H0Y8G0 127 aa10.88□□□□□ -0.67
PTCHD3-201ENST00000438700 HIST1H1EP10412 219 aaKnown RBP10.88□□□□□ -0.67
PTCHD3-201ENST00000438700 ZNF138P52744 262 aa10.88□□□□□ -0.67
PTCHD3-201ENST00000438700 FAM120AOSQ5T036 256 aa10.88□□□□□ -0.67
PTCHD3-201ENST00000438700 BCL6BQ8N143 479 aaPredicted RBP10.88□□□□□ -0.67
PTCHD3-201ENST00000438700 PIP4P2Q8N4L2 257 aa10.88□□□□□ -0.67
PTCHD3-201ENST00000438700 SRSF8Q9BRL6 282 aaKnown RBP10.88□□□□□ -0.67
PTCHD3-201ENST00000438700 CENPVL3A0A0U1RRI6 287 aa10.88□□□□□ -0.67
PTCHD3-201ENST00000438700 NPFFO15130 113 aa10.88□□□□□ -0.67
PTCHD3-201ENST00000438700 NUDT3O95989 172 aa10.88□□□□□ -0.67
PTCHD3-201ENST00000438700 IGHV3-23P01764 117 aa10.88□□□□□ -0.67
PTCHD3-201ENST00000438700 SAPCD1Q5SSQ6 148 aa10.88□□□□□ -0.67
PTCHD3-201ENST00000438700 ARPC1AQ92747 370 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms