RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 KLHL30-AS1Q8NEE0 82 aa2.47□□□□□ -2.01
HMGB1P12-201ENST00000438594 CIRBP-AS1Q8TBR5 109 aa2.47□□□□□ -2.01
HMGB1P12-201ENST00000438594 DIRC1Q969H9 104 aa2.47□□□□□ -2.01
HMGB1P12-201ENST00000438594 SEC11CQ9BY50 192 aa2.47□□□□□ -2.01
HMGB1P12-201ENST00000438594 NPCDR1Q9BY65 106 aa2.47□□□□□ -2.01
HMGB1P12-201ENST00000438594 TTTY13Q9BZ97 58 aa2.47□□□□□ -2.01
HMGB1P12-201ENST00000438594 DPY30Q9C005 99 aa2.47□□□□□ -2.01
HMGB1P12-201ENST00000438594 OSTCQ9NRP0 149 aa2.47□□□□□ -2.01
HMGB1P12-201ENST00000438594 C21orf62Q9NYP8 219 aa2.47□□□□□ -2.01
HMGB1P12-201ENST00000438594 CRB1P82279 1406 aa2.47□□□□□ -2.01
HMGB1P12-201ENST00000438594 YEATS2Q9ULM3 1422 aa2.47□□□□□ -2.01
HMGB1P12-201ENST00000438594 CPS1P31327 1500 aa2.47□□□□□ -2.01
HMGB1P12-201ENST00000438594 TULP4Q9NRJ4 1543 aa2.47□□□□□ -2.01
HMGB1P12-201ENST00000438594 SCAF11Q99590 1463 aaKnown RBP2.46□□□□□ -2.02
HMGB1P12-201ENST00000438594 SCN2AQ99250 2005 aa2.46□□□□□ -2.02
HMGB1P12-201ENST00000438594 TCRBV3S1A0A5B6 114 aa2.46□□□□□ -2.02
HMGB1P12-201ENST00000438594 FAM72CH0Y354 149 aa2.46□□□□□ -2.02
HMGB1P12-201ENST00000438594 GIG44P09565 113 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P12-201ENST00000438594 RPL27AP46776 148 aaKnown RBP2.46□□□□□ -2.02
HMGB1P12-201ENST00000438594 TIMM10P62072 90 aa2.46□□□□□ -2.02
HMGB1P12-201ENST00000438594 KLRD1Q13241 179 aa2.46□□□□□ -2.02
HMGB1P12-201ENST00000438594 Q56UQ5 140 aa2.46□□□□□ -2.02
HMGB1P12-201ENST00000438594 FAM78AQ5JUQ0 283 aa2.46□□□□□ -2.02
HMGB1P12-201ENST00000438594 LCE3AQ5TA76 89 aa2.46□□□□□ -2.02
HMGB1P12-201ENST00000438594 C9orf153Q5TBE3 101 aa2.46□□□□□ -2.02
HMGB1P12-201ENST00000438594 FAM72AQ5TYM5 149 aa2.46□□□□□ -2.02
HMGB1P12-201ENST00000438594 FAM72DQ6L9T8 149 aa2.46□□□□□ -2.02
HMGB1P12-201ENST00000438594 FAM72BQ86X60 149 aa2.46□□□□□ -2.02
HMGB1P12-201ENST00000438594 AMN1Q8IY45 258 aa2.46□□□□□ -2.02
HMGB1P12-201ENST00000438594 HIST3H2BBQ8N257 126 aa2.46□□□□□ -2.02
HMGB1P12-201ENST00000438594 Q8N2B8 174 aa2.46□□□□□ -2.02
HMGB1P12-201ENST00000438594 SVBPQ8N300 66 aa2.46□□□□□ -2.02
HMGB1P12-201ENST00000438594 C10orf111Q8N326 155 aa2.46□□□□□ -2.02
HMGB1P12-201ENST00000438594 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P12-201ENST00000438594 OTOSQ8NHW6 89 aa2.46□□□□□ -2.02
HMGB1P12-201ENST00000438594 LSM10Q969L4 123 aaKnown RBP2.46□□□□□ -2.02
HMGB1P12-201ENST00000438594 RBMXL1Q96E39 390 aaKnown RBP2.46□□□□□ -2.02
HMGB1P12-201ENST00000438594 LINC00052Q96N35 136 aa2.46□□□□□ -2.02
HMGB1P12-201ENST00000438594 LITAFQ99732 161 aa2.46□□□□□ -2.02
HMGB1P12-201ENST00000438594 HIST1H2BLQ99880 126 aa2.46□□□□□ -2.02
HMGB1P12-201ENST00000438594 VAMP8Q9BV40 100 aa2.46□□□□□ -2.02
HMGB1P12-201ENST00000438594 SLC35B3Q9H1N7 401 aa2.46□□□□□ -2.02
HMGB1P12-201ENST00000438594 XAGE1AQ9HD64 81 aa2.46□□□□□ -2.02
HMGB1P12-201ENST00000438594 LINC00312Q9Y6C7 94 aa2.46□□□□□ -2.02
HMGB1P12-201ENST00000438594 UBR2Q8IWV8 1755 aa2.46□□□□□ -2.02
HMGB1P12-201ENST00000438594 PCNX3Q9H6A9 2034 aa2.46□□□□□ -2.02
HMGB1P12-201ENST00000438594 ANKRD31Q8N7Z5 1873 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 KIAA1671Q9BY89 1806 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 DSCAML1Q8TD84 2053 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 ZNF142P52746 1687 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 LOXHD1Q8IVV2 1947 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 IGLV11-55A0A075B6I3 123 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 IGKV6D-41A0A0C4DH26 115 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 KLF18A0A0U1RQI7 1052 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 A0A1W2PPR1 153 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 A8MWP4 228 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 OOSP1A8MZH6 123 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 TMEM262E9PQX1 116 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 H3BT86 120 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 K7ERS5 55 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 OR1I1O60431 355 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 CD3DP04234 171 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 P0C879 139 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 CRYGAP11844 174 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 PTHLHP12272 177 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 LYZP61626 148 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 HIST1H4AP62805 103 aaKnown RBP2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 DCDP81605 110 aaKnown RBP2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 FOXF1Q12946 379 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 LINC01545Q5VT33 79 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 PATE2Q6UY27 113 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 ZFP2Q6ZN57 461 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 C16orf47Q6ZP98 133 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 Q6ZUT4 128 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 MIR17HGQ75NE6 70 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 OR4X2Q8NGF9 303 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 ZNF714Q96N38 554 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 UPK3BQ9BT76 320 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 DEFB126Q9BYW3 111 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 NOP16Q9Y3C1 178 aaKnown RBP2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 SERP1Q9Y6X1 66 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 COL18A1P39060 1754 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 FANCMQ8IYD8 2048 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 NUP210LQ5VU65 1888 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 MON2Q7Z3U7 1717 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 XRN1Q8IZH2 1706 aaKnown RBP2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 PTPRMP28827 1452 aa2.45□□□□□ -2.02
HMGB1P12-201ENST00000438594 GLI3P10071 1580 aa2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 DIP2AQ14689 1571 aa2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 MED1Q15648 1581 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 LRRC37A3O60309 1634 aa2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 PHRF1Q9P1Y6 1649 aaKnown RBP2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 IGLV3-9A0A075B6K5 115 aa2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 TRGV5A0A0B4J1U4 118 aa2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 A0A0D9SG52 128 aa2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 MUC21A0A0G2JKD1 596 aa2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 C3orf85A0A1B0GTC6 90 aa2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 PINLYPA6NC86 204 aa2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 MCRIP1C9JLW8 97 aa2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 C3orf84H3BNL1 204 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms