RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 TFPI2P48307 235 aa9.59□□□□□ -0.87
CLDN4-203ENST00000435050 FAM19A2Q8N3H0 131 aa9.59□□□□□ -0.87
CLDN4-203ENST00000435050 Q8TAT8 98 aa9.59□□□□□ -0.87
CLDN4-203ENST00000435050 METTL26Q96S19 204 aa9.59□□□□□ -0.87
CLDN4-203ENST00000435050 SIRPDQ9H106 197 aa9.59□□□□□ -0.87
CLDN4-203ENST00000435050 LINC01548A6NM66 108 aa9.59□□□□□ -0.87
CLDN4-203ENST00000435050 CRYGBP07316 175 aa9.59□□□□□ -0.87
CLDN4-203ENST00000435050 IQCJQ1A5X6 159 aa9.59□□□□□ -0.87
CLDN4-203ENST00000435050 CDPF1Q6NVV7 123 aa9.59□□□□□ -0.87
CLDN4-203ENST00000435050 C16orf54Q6UWD8 224 aa9.59□□□□□ -0.87
CLDN4-203ENST00000435050 ZNF491Q8N8L2 437 aa9.59□□□□□ -0.87
CLDN4-203ENST00000435050 VN1R17PQ8TDU5 208 aa9.59□□□□□ -0.87
CLDN4-203ENST00000435050 HLA-DQA1P01909 254 aa9.59□□□□□ -0.87
CLDN4-203ENST00000435050 PIP4P2Q8N4L2 257 aa9.59□□□□□ -0.87
CLDN4-203ENST00000435050 GRAMD2BQ96HH9 432 aa9.59□□□□□ -0.87
CLDN4-203ENST00000435050 TOMM40O96008 361 aa9.58□□□□□ -0.88
CLDN4-203ENST00000435050 ZNF705AQ6ZN79 300 aaPredicted RBP9.58□□□□□ -0.88
CLDN4-203ENST00000435050 BCL6BQ8N143 479 aaPredicted RBP9.58□□□□□ -0.88
CLDN4-203ENST00000435050 SHANK2-AS3Q9BTD1 123 aa9.58□□□□□ -0.88
CLDN4-203ENST00000435050 RPP21Q9H633 154 aaKnown RBP9.58□□□□□ -0.88
CLDN4-203ENST00000435050 PSG8Q9UQ74 426 aa9.58□□□□□ -0.88
CLDN4-203ENST00000435050 TRAV41A0A0B4J266 112 aa9.58□□□□□ -0.88
CLDN4-203ENST00000435050 IGHV1-69DA0A0B4J2H0 117 aa9.58□□□□□ -0.88
CLDN4-203ENST00000435050 IGHV1-69P01742 117 aa9.58□□□□□ -0.88
CLDN4-203ENST00000435050 Q8N9W7 124 aa9.58□□□□□ -0.88
CLDN4-203ENST00000435050 FMC1Q96HJ9 113 aa9.58□□□□□ -0.88
CLDN4-203ENST00000435050 YPEL4Q96NS1 127 aa9.58□□□□□ -0.88
CLDN4-203ENST00000435050 ARL2-SNX15V9GYD0 113 aa9.58□□□□□ -0.88
CLDN4-203ENST00000435050 INS-IGF2F8WCM5 200 aa9.58□□□□□ -0.88
CLDN4-203ENST00000435050 GCGP01275 180 aa9.58□□□□□ -0.88
CLDN4-203ENST00000435050 MOB4Q9Y3A3 225 aa9.58□□□□□ -0.88
CLDN4-203ENST00000435050 DMRT1Q9Y5R6 373 aa9.58□□□□□ -0.88
CLDN4-203ENST00000435050 WNK1Q9H4A3 2382 aa9.58□□□□□ -0.88
CLDN4-203ENST00000435050 ODF3BA8MYP8 253 aa9.57□□□□□ -0.88
CLDN4-203ENST00000435050 SMAD7O15105 426 aaKnown RBP9.57□□□□□ -0.88
CLDN4-203ENST00000435050 MT-ND6P03923 174 aa9.57□□□□□ -0.88
CLDN4-203ENST00000435050 MSMBP08118 114 aa9.57□□□□□ -0.88
CLDN4-203ENST00000435050 C1orf122Q6ZSJ8 110 aa9.57□□□□□ -0.88
CLDN4-203ENST00000435050 C16orf92Q96LL3 132 aa9.57□□□□□ -0.88
CLDN4-203ENST00000435050 IZUMO1RA6ND01 250 aa9.57□□□□□ -0.88
CLDN4-203ENST00000435050 TMEM8BA6NDV4 472 aa9.57□□□□□ -0.88
CLDN4-203ENST00000435050 NDUFS8O00217 210 aa9.57□□□□□ -0.88
CLDN4-203ENST00000435050 CRYGCP07315 174 aa9.57□□□□□ -0.88
CLDN4-203ENST00000435050 RNF223E7ERA6 249 aa9.57□□□□□ -0.88
CLDN4-203ENST00000435050 CIDEAO60543 219 aa9.57□□□□□ -0.88
CLDN4-203ENST00000435050 TMEM183BQ1AE95 376 aa9.57□□□□□ -0.88
CLDN4-203ENST00000435050 NUP35Q8NFH5 326 aa9.57□□□□□ -0.88
CLDN4-203ENST00000435050 NPBQ8NG41 125 aa9.57□□□□□ -0.88
CLDN4-203ENST00000435050 TCF21O43680 179 aa9.56□□□□□ -0.88
CLDN4-203ENST00000435050 HLA-DMBP28068 263 aa9.56□□□□□ -0.88
CLDN4-203ENST00000435050 FANCD2OSQ96PS1 177 aa9.56□□□□□ -0.88
CLDN4-203ENST00000435050 PAM16Q9Y3D7 125 aa9.56□□□□□ -0.88
CLDN4-203ENST00000435050 SORL1Q92673 2214 aa9.56□□□□□ -0.88
CLDN4-203ENST00000435050 LOC102724200A0A096LPH7 203 aaPredicted RBP9.56□□□□□ -0.88
CLDN4-203ENST00000435050 TMEM189A5PLL7 270 aa9.56□□□□□ -0.88
CLDN4-203ENST00000435050 SRD5A1P18405 259 aa9.56□□□□□ -0.88
CLDN4-203ENST00000435050 ARL3P36405 182 aa9.56□□□□□ -0.88
CLDN4-203ENST00000435050 SRSF8Q9BRL6 282 aaKnown RBP9.56□□□□□ -0.88
CLDN4-203ENST00000435050 LY96Q9Y6Y9 160 aa9.56□□□□□ -0.88
CLDN4-203ENST00000435050 B4DSR2 109 aa9.56□□□□□ -0.88
CLDN4-203ENST00000435050 M0R2Z0 102 aa9.56□□□□□ -0.88
CLDN4-203ENST00000435050 NDUFA3O95167 84 aa9.56□□□□□ -0.88
CLDN4-203ENST00000435050 GP9P14770 177 aa9.56□□□□□ -0.88
CLDN4-203ENST00000435050 IGLV11-55A0A075B6I3 123 aa9.55□□□□□ -0.88
CLDN4-203ENST00000435050 LOC389332A0A1B0GUA5 103 aa9.55□□□□□ -0.88
CLDN4-203ENST00000435050 MRGPRG-AS1Q2M3A8 158 aa9.55□□□□□ -0.88
CLDN4-203ENST00000435050 TRBV19A0A075B6N1 114 aa9.55□□□□□ -0.88
CLDN4-203ENST00000435050 NPIPB5A8MRT5 1133 aa9.55□□□□□ -0.88
CLDN4-203ENST00000435050 PPIFP30405 207 aaKnown RBP9.55□□□□□ -0.88
CLDN4-203ENST00000435050 RNF182Q8N6D2 247 aa9.55□□□□□ -0.88
CLDN4-203ENST00000435050 PYGO2Q9BRQ0 406 aa9.55□□□□□ -0.88
CLDN4-203ENST00000435050 SMG1Q96Q15 3661 aaKnown RBP9.55□□□□□ -0.88
CLDN4-203ENST00000435050 F2Z2F3 143 aa9.55□□□□□ -0.88
CLDN4-203ENST00000435050 HBBP68871 147 aa9.55□□□□□ -0.88
CLDN4-203ENST00000435050 PSG9Q00887 426 aa9.55□□□□□ -0.88
CLDN4-203ENST00000435050 COX19Q49B96 90 aa9.55□□□□□ -0.88
CLDN4-203ENST00000435050 ZNF738Q8NE65 137 aa9.55□□□□□ -0.88
CLDN4-203ENST00000435050 PRRC2AP48634 2157 aaKnown RBP9.55□□□□□ -0.88
CLDN4-203ENST00000435050 DMRTA1Q5VZB9 504 aa9.54□□□□□ -0.88
CLDN4-203ENST00000435050 C10orf105Q8TEF2 133 aa9.54□□□□□ -0.88
CLDN4-203ENST00000435050 TSKUQ8WUA8 353 aa9.54□□□□□ -0.88
CLDN4-203ENST00000435050 ABCA2Q9BZC7 2435 aa9.54□□□□□ -0.88
CLDN4-203ENST00000435050 IFITM10A6NMD0 228 aa9.54□□□□□ -0.88
CLDN4-203ENST00000435050 Q86TA4 180 aa9.54□□□□□ -0.88
CLDN4-203ENST00000435050 ATOH7Q8N100 152 aa9.54□□□□□ -0.88
CLDN4-203ENST00000435050 H3BRN7 92 aa9.54□□□□□ -0.88
CLDN4-203ENST00000435050 BLCAPP62952 87 aa9.54□□□□□ -0.88
CLDN4-203ENST00000435050 TTC9CQ8N5M4 171 aa9.54□□□□□ -0.88
CLDN4-203ENST00000435050 PRSS3P2Q8NHM4 247 aa9.54□□□□□ -0.88
CLDN4-203ENST00000435050 FAM110DQ8TAY7 271 aaPredicted RBP9.54□□□□□ -0.88
CLDN4-203ENST00000435050 PSMB11A5LHX3 300 aa9.53□□□□□ -0.88
CLDN4-203ENST00000435050 M0QZ24 198 aa9.53□□□□□ -0.88
CLDN4-203ENST00000435050 TYMSP04818 313 aa9.53□□□□□ -0.88
CLDN4-203ENST00000435050 RIGQ13278 110 aa9.53□□□□□ -0.88
CLDN4-203ENST00000435050 TMEM95Q3KNT9 176 aa9.53□□□□□ -0.88
CLDN4-203ENST00000435050 CFAP161Q6P656 301 aa9.53□□□□□ -0.88
CLDN4-203ENST00000435050 C8orf49Q96NF6 230 aa9.53□□□□□ -0.88
CLDN4-203ENST00000435050 HSBP1L1C9JCN9 74 aa9.53□□□□□ -0.88
CLDN4-203ENST00000435050 YPEL3P61236 119 aaPredicted RBP9.53□□□□□ -0.88
CLDN4-203ENST00000435050 TMEM78Q5T7P6 136 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 149.2 ms