RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 PFDN1O60925 122 aa13.61□□□□□ -0.23
RFTN1-202ENST00000431547 HAGHQ16775 308 aa13.61□□□□□ -0.23
RFTN1-202ENST00000431547 SAT2Q96F10 170 aaPredicted RBP13.61□□□□□ -0.23
RFTN1-202ENST00000431547 SLC50A1Q9BRV3 221 aa13.61□□□□□ -0.23
RFTN1-202ENST00000431547 OR51M1Q9H341 326 aa13.61□□□□□ -0.23
RFTN1-202ENST00000431547 A0A1W2PPV4 95 aa13.6□□□□□ -0.23
RFTN1-202ENST00000431547 SNRPCP09234 159 aaKnown RBP13.6□□□□□ -0.23
RFTN1-202ENST00000431547 NHLRC4P0CG21 123 aaPredicted RBP13.6□□□□□ -0.23
RFTN1-202ENST00000431547 PYYP10082 97 aa13.6□□□□□ -0.23
RFTN1-202ENST00000431547 SPP1P10451 314 aa13.6□□□□□ -0.23
RFTN1-202ENST00000431547 TAS2R45P59539 299 aa13.6□□□□□ -0.23
RFTN1-202ENST00000431547 RPP25LQ8N5L8 163 aaKnown RBP13.6□□□□□ -0.23
RFTN1-202ENST00000431547 C20orf173Q96LM9 149 aa13.6□□□□□ -0.23
RFTN1-202ENST00000431547 ASCL2Q99929 193 aa13.6□□□□□ -0.23
RFTN1-202ENST00000431547 ZNF471Q9BX82 626 aaPredicted RBP13.6□□□□□ -0.23
RFTN1-202ENST00000431547 ZNF331Q9NQX6 463 aaPredicted RBP13.6□□□□□ -0.23
RFTN1-202ENST00000431547 RPRMQ9NS64 109 aa13.6□□□□□ -0.23
RFTN1-202ENST00000431547 ZNF586Q9NXT0 402 aa13.6□□□□□ -0.23
RFTN1-202ENST00000431547 TRBV19A0A075B6N1 114 aa13.59□□□□□ -0.23
RFTN1-202ENST00000431547 KIR2DL5BA0A0G2JN68 375 aa13.59□□□□□ -0.23
RFTN1-202ENST00000431547 KIR2DL5BA0A0G2JPC4 375 aa13.59□□□□□ -0.23
RFTN1-202ENST00000431547 KNCNA6PVL3 124 aa13.59□□□□□ -0.23
RFTN1-202ENST00000431547 ZNF253O75346 499 aa13.59□□□□□ -0.23
RFTN1-202ENST00000431547 EIF5AP63241 154 aaKnown RBP13.59□□□□□ -0.23
RFTN1-202ENST00000431547 ZFP69Q49AA0 526 aa13.59□□□□□ -0.23
RFTN1-202ENST00000431547 KHDC3LQ587J8 217 aa13.59□□□□□ -0.23
RFTN1-202ENST00000431547 TMEM41BQ5BJD5 291 aa13.59□□□□□ -0.23
RFTN1-202ENST00000431547 ACTL10Q5JWF8 245 aa13.59□□□□□ -0.23
RFTN1-202ENST00000431547 IGFL4Q6B9Z1 124 aa13.59□□□□□ -0.23
RFTN1-202ENST00000431547 FAM122CQ6P4D5 195 aa13.59□□□□□ -0.23
RFTN1-202ENST00000431547 STHQ8IWL8 128 aa13.59□□□□□ -0.23
RFTN1-202ENST00000431547 KIR2DL5AQ8N109 375 aa13.59□□□□□ -0.23
RFTN1-202ENST00000431547 KIR2DL5BQ8NHK3 375 aa13.59□□□□□ -0.23
RFTN1-202ENST00000431547 PAXXQ9BUH6 204 aa13.59□□□□□ -0.23
RFTN1-202ENST00000431547 CLEC5AQ9NY25 188 aa13.59□□□□□ -0.23
RFTN1-202ENST00000431547 PRKDCP78527 4128 aaKnown RBP13.58□□□□□ -0.24
RFTN1-202ENST00000431547 H3BTX0 84 aa13.58□□□□□ -0.24
RFTN1-202ENST00000431547 NBEAP1P0C6P0 100 aa13.58□□□□□ -0.24
RFTN1-202ENST00000431547 RPL35AP18077 110 aaKnown RBP13.58□□□□□ -0.24
RFTN1-202ENST00000431547 APOC4P55056 127 aa13.58□□□□□ -0.24
RFTN1-202ENST00000431547 PDE6HQ13956 83 aa13.58□□□□□ -0.24
RFTN1-202ENST00000431547 PSG3Q16557 428 aa13.58□□□□□ -0.24
RFTN1-202ENST00000431547 FOXI2Q6ZQN5 318 aa13.58□□□□□ -0.24
RFTN1-202ENST00000431547 TRPT1Q86TN4 253 aaKnown RBP13.58□□□□□ -0.24
RFTN1-202ENST00000431547 RNF182Q8N6D2 247 aa13.58□□□□□ -0.24
RFTN1-202ENST00000431547 RNF141Q8WVD5 230 aa13.58□□□□□ -0.24
RFTN1-202ENST00000431547 FXYD5Q96DB9 178 aa13.58□□□□□ -0.24
RFTN1-202ENST00000431547 ZNF503Q96F45 646 aa13.58□□□□□ -0.24
RFTN1-202ENST00000431547 SAV1Q9H4B6 383 aaPredicted RBP13.58□□□□□ -0.24
RFTN1-202ENST00000431547 H3BMM0 161 aa13.57□□□□□ -0.24
RFTN1-202ENST00000431547 SLC17A3O00476 420 aa13.57□□□□□ -0.24
RFTN1-202ENST00000431547 OR7C2O60412 319 aa13.57□□□□□ -0.24
RFTN1-202ENST00000431547 SEC11BP0C7V7 166 aa13.57□□□□□ -0.24
RFTN1-202ENST00000431547 CDC34P49427 236 aaPredicted RBP13.57□□□□□ -0.24
RFTN1-202ENST00000431547 TM2D3Q9BRN9 247 aa13.57□□□□□ -0.24
RFTN1-202ENST00000431547 ACTR3CQ9C0K3 210 aaPredicted RBP13.57□□□□□ -0.24
RFTN1-202ENST00000431547 UBE2CO00762 179 aa13.56□□□□□ -0.24
RFTN1-202ENST00000431547 NDUFB4O95168 129 aa13.56□□□□□ -0.24
RFTN1-202ENST00000431547 OR10J4P0C629 311 aa13.56□□□□□ -0.24
RFTN1-202ENST00000431547 HLA-DRB4P13762 266 aa13.56□□□□□ -0.24
RFTN1-202ENST00000431547 PSG9Q00887 426 aa13.56□□□□□ -0.24
RFTN1-202ENST00000431547 EBLN2Q6P2I7 272 aa13.56□□□□□ -0.24
RFTN1-202ENST00000431547 PQLC2Q6ZP29 291 aa13.56□□□□□ -0.24
RFTN1-202ENST00000431547 BAP18Q8IXM2 172 aa13.56□□□□□ -0.24
RFTN1-202ENST00000431547 STOML3Q8TAV4 291 aa13.56□□□□□ -0.24
RFTN1-202ENST00000431547 RAB24Q969Q5 203 aa13.56□□□□□ -0.24
RFTN1-202ENST00000431547 CSTL1Q9H114 145 aa13.56□□□□□ -0.24
RFTN1-202ENST00000431547 HLA-DRB4X5D2U9 266 aa13.56□□□□□ -0.24
RFTN1-202ENST00000431547 A0A0J9YX75 114 aa13.55□□□□□ -0.24
RFTN1-202ENST00000431547 EIF3GO75821 320 aaKnown RBP eCLIP13.55□□□□□ -0.24
RFTN1-202ENST00000431547 STAG3L2P0CL84 134 aa13.55□□□□□ -0.24
RFTN1-202ENST00000431547 STAG3L3P0CL85 134 aa13.55□□□□□ -0.24
RFTN1-202ENST00000431547 TPT1P13693 172 aaKnown RBP13.55□□□□□ -0.24
RFTN1-202ENST00000431547 HLA-DMBP28068 263 aa13.55□□□□□ -0.24
RFTN1-202ENST00000431547 DEFB1P60022 68 aa13.55□□□□□ -0.24
RFTN1-202ENST00000431547 AKR1C8PQ5T2L2 129 aa13.55□□□□□ -0.24
RFTN1-202ENST00000431547 GDF5OSQ5U4N7 250 aa13.55□□□□□ -0.24
RFTN1-202ENST00000431547 C9orf62Q8N4C0 152 aa13.55□□□□□ -0.24
RFTN1-202ENST00000431547 ZNF738Q8NE65 137 aa13.55□□□□□ -0.24
RFTN1-202ENST00000431547 BLNKQ8WV28 456 aa13.55□□□□□ -0.24
RFTN1-202ENST00000431547 CLUHP3Q96NS8 147 aa13.55□□□□□ -0.24
RFTN1-202ENST00000431547 F6UB75 175 aa13.54□□□□□ -0.24
RFTN1-202ENST00000431547 C4BPBP20851 252 aa13.54□□□□□ -0.24
RFTN1-202ENST00000431547 UBE2L3P68036 154 aaKnown RBP13.54□□□□□ -0.24
RFTN1-202ENST00000431547 MORN3Q6PF18 240 aaPredicted RBP13.54□□□□□ -0.24
RFTN1-202ENST00000431547 ZMAT4Q9H898 229 aa13.54□□□□□ -0.24
RFTN1-202ENST00000431547 HMGB3O15347 200 aaKnown RBP13.53□□□□□ -0.24
RFTN1-202ENST00000431547 Q6ZWC4 215 aa13.53□□□□□ -0.24
RFTN1-202ENST00000431547 RPUSD4Q96CM3 377 aaKnown RBP13.53□□□□□ -0.24
RFTN1-202ENST00000431547 SPATA25Q9BR10 227 aa13.53□□□□□ -0.24
RFTN1-202ENST00000431547 PRELID1Q9Y255 219 aa13.53□□□□□ -0.24
RFTN1-202ENST00000431547 CTXND1A0A1B0GTU2 59 aa13.52□□□□□ -0.25
RFTN1-202ENST00000431547 UMAD1C9J7I0 102 aa13.52□□□□□ -0.25
RFTN1-202ENST00000431547 DUSP14O95147 198 aaKnown RBP13.52□□□□□ -0.25
RFTN1-202ENST00000431547 ARL14EPLP0DKL9 152 aa13.52□□□□□ -0.25
RFTN1-202ENST00000431547 ZNF726P1Q15940 193 aa13.52□□□□□ -0.25
RFTN1-202ENST00000431547 SLC51BQ86UW2 128 aa13.52□□□□□ -0.25
RFTN1-202ENST00000431547 LYPD1Q8N2G4 141 aa13.52□□□□□ -0.25
RFTN1-202ENST00000431547 MRPL53Q96EL3 112 aaKnown RBP13.52□□□□□ -0.25
RFTN1-202ENST00000431547 AAMDCQ9H7C9 122 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms