RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 RPL15P61313 204 aaKnown RBP12.94□□□□□ -0.34
USHBP1-203ENST00000431146 EEF1AKMT3Q96AZ1 226 aa12.94□□□□□ -0.34
USHBP1-203ENST00000431146 PDZD2O15018 2839 aa12.93□□□□□ -0.34
USHBP1-203ENST00000431146 TRBV19A0A075B6N1 114 aa12.93□□□□□ -0.34
USHBP1-203ENST00000431146 PPP5D1E7EU14 171 aa12.93□□□□□ -0.34
USHBP1-203ENST00000431146 SCGB2A1O75556 95 aa12.93□□□□□ -0.34
USHBP1-203ENST00000431146 IGF1P05019 195 aa12.93□□□□□ -0.34
USHBP1-203ENST00000431146 BMI1P35226 326 aa12.93□□□□□ -0.34
USHBP1-203ENST00000431146 SRP14P37108 136 aaKnown RBP12.93□□□□□ -0.34
USHBP1-203ENST00000431146 CRIP2P52943 208 aaPredicted RBP12.93□□□□□ -0.34
USHBP1-203ENST00000431146 ATP5G2Q06055 141 aa12.93□□□□□ -0.34
USHBP1-203ENST00000431146 TOMM20LQ6UXN7 152 aa12.93□□□□□ -0.34
USHBP1-203ENST00000431146 LCNL1Q6ZST4 164 aa12.93□□□□□ -0.34
USHBP1-203ENST00000431146 PYGO2Q9BRQ0 406 aa12.93□□□□□ -0.34
USHBP1-203ENST00000431146 EREGO14944 169 aa12.92□□□□□ -0.34
USHBP1-203ENST00000431146 KCNIP4Q6PIL6 250 aa12.92□□□□□ -0.34
USHBP1-203ENST00000431146 C5orf17Q8NAS9 161 aa12.92□□□□□ -0.34
USHBP1-203ENST00000431146 RABAC1Q9UI14 185 aa12.92□□□□□ -0.34
USHBP1-203ENST00000431146 FLNAP21333 2647 aaKnown RBP12.92□□□□□ -0.34
USHBP1-203ENST00000431146 GGCTO75223 188 aaKnown RBP12.92□□□□□ -0.34
USHBP1-203ENST00000431146 GCGP01275 180 aa12.92□□□□□ -0.34
USHBP1-203ENST00000431146 NPSP0C0P6 89 aa12.92□□□□□ -0.34
USHBP1-203ENST00000431146 TPPP2P59282 170 aa12.92□□□□□ -0.34
USHBP1-203ENST00000431146 UBE2G1P62253 170 aa12.92□□□□□ -0.34
USHBP1-203ENST00000431146 BAGE2Q86Y30 109 aa12.92□□□□□ -0.34
USHBP1-203ENST00000431146 CIARTQ8N365 385 aaPredicted RBP12.92□□□□□ -0.34
USHBP1-203ENST00000431146 WFDC11Q8NEX6 87 aa12.92□□□□□ -0.34
USHBP1-203ENST00000431146 ATG101Q9BSB4 218 aa12.92□□□□□ -0.34
USHBP1-203ENST00000431146 OTORQ9NRC9 128 aa12.92□□□□□ -0.34
USHBP1-203ENST00000431146 TRBV7-1A0A0A6YYK4 115 aa12.91□□□□□ -0.34
USHBP1-203ENST00000431146 TGOLN2O43493 480 aa12.91□□□□□ -0.34
USHBP1-203ENST00000431146 TCRAP04437 139 aa12.91□□□□□ -0.34
USHBP1-203ENST00000431146 IER3P46695 156 aa12.91□□□□□ -0.34
USHBP1-203ENST00000431146 KLK15Q9H2R5 256 aa12.91□□□□□ -0.34
USHBP1-203ENST00000431146 ZFAND3Q9H8U3 227 aa12.91□□□□□ -0.34
USHBP1-203ENST00000431146 V9GYV3 84 aa12.91□□□□□ -0.34
USHBP1-203ENST00000431146 TRAV8-1A0A0A6YYK1 113 aa12.91□□□□□ -0.34
USHBP1-203ENST00000431146 BMPR1BO00238 502 aa12.91□□□□□ -0.34
USHBP1-203ENST00000431146 PPIFP30405 207 aaKnown RBP12.91□□□□□ -0.34
USHBP1-203ENST00000431146 TMEM183BQ1AE95 376 aa12.91□□□□□ -0.34
USHBP1-203ENST00000431146 MBD6Q96DN6 1003 aa12.91□□□□□ -0.34
USHBP1-203ENST00000431146 PRO1933Q9H354 126 aa12.91□□□□□ -0.34
USHBP1-203ENST00000431146 IGHV3OR16-13A0A075B7E8 117 aa12.9□□□□□ -0.34
USHBP1-203ENST00000431146 IGHV3-74A0A0B4J1X5 117 aa12.9□□□□□ -0.34
USHBP1-203ENST00000431146 IGHV3-66A0A0C4DH42 116 aa12.9□□□□□ -0.34
USHBP1-203ENST00000431146 ZNF207O43670 478 aaKnown RBP12.9□□□□□ -0.34
USHBP1-203ENST00000431146 FSHBP01225 129 aa12.9□□□□□ -0.34
USHBP1-203ENST00000431146 PRR27Q6MZM9 219 aa12.9□□□□□ -0.34
USHBP1-203ENST00000431146 SIGLEC15Q6ZMC9 328 aa12.9□□□□□ -0.34
USHBP1-203ENST00000431146 Q71RC1 249 aaPredicted RBP12.9□□□□□ -0.34
USHBP1-203ENST00000431146 FRZBQ92765 325 aa12.9□□□□□ -0.34
USHBP1-203ENST00000431146 SONP18583 2426 aaKnown RBP12.9□□□□□ -0.34
USHBP1-203ENST00000431146 FAM223BA6NKX1 122 aa12.89□□□□□ -0.35
USHBP1-203ENST00000431146 HIST1H2BKO60814 126 aa12.89□□□□□ -0.35
USHBP1-203ENST00000431146 TRBV12-3P01733 135 aa12.89□□□□□ -0.35
USHBP1-203ENST00000431146 IGHV3-11P01762 117 aa12.89□□□□□ -0.35
USHBP1-203ENST00000431146 HIST1H2BJP06899 126 aa12.89□□□□□ -0.35
USHBP1-203ENST00000431146 HIST1H2BOP23527 126 aa12.89□□□□□ -0.35
USHBP1-203ENST00000431146 HIST1H2BBP33778 126 aa12.89□□□□□ -0.35
USHBP1-203ENST00000431146 HIST1H2BDP58876 126 aa12.89□□□□□ -0.35
USHBP1-203ENST00000431146 HIST1H2BCP62807 126 aa12.89□□□□□ -0.35
USHBP1-203ENST00000431146 HIST2H2BEQ16778 126 aa12.89□□□□□ -0.35
USHBP1-203ENST00000431146 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.89□□□□□ -0.35
USHBP1-203ENST00000431146 IBA57Q5T440 356 aaKnown RBP12.89□□□□□ -0.35
USHBP1-203ENST00000431146 GOLT1AQ6ZVE7 132 aa12.89□□□□□ -0.35
USHBP1-203ENST00000431146 FAM223AQ8IWN6 122 aa12.89□□□□□ -0.35
USHBP1-203ENST00000431146 OR8I2Q8N0Y5 310 aa12.89□□□□□ -0.35
USHBP1-203ENST00000431146 CMTM2Q8TAZ6 248 aa12.89□□□□□ -0.35
USHBP1-203ENST00000431146 HIST1H2BHQ93079 126 aa12.89□□□□□ -0.35
USHBP1-203ENST00000431146 HIST1H2BNQ99877 126 aa12.89□□□□□ -0.35
USHBP1-203ENST00000431146 HIST1H2BMQ99879 126 aa12.89□□□□□ -0.35
USHBP1-203ENST00000431146 SRD5A3Q9H8P0 318 aa12.89□□□□□ -0.35
USHBP1-203ENST00000431146 IGHV3-49A0A0A0MS15 119 aa12.89□□□□□ -0.35
USHBP1-203ENST00000431146 ZNF320A2RRD8 509 aa12.89□□□□□ -0.35
USHBP1-203ENST00000431146 M0R143 59 aa12.89□□□□□ -0.35
USHBP1-203ENST00000431146 M0R3E3 92 aa12.89□□□□□ -0.35
USHBP1-203ENST00000431146 SMAD7O15105 426 aaKnown RBP12.89□□□□□ -0.35
USHBP1-203ENST00000431146 PF4V1P10720 104 aa12.89□□□□□ -0.35
USHBP1-203ENST00000431146 FOXL1Q12952 345 aa12.89□□□□□ -0.35
USHBP1-203ENST00000431146 SMIM15Q7Z3B0 74 aa12.89□□□□□ -0.35
USHBP1-203ENST00000431146 S100A7AQ86SG5 101 aa12.89□□□□□ -0.35
USHBP1-203ENST00000431146 OR10D4PQ8NGN7 298 aa12.89□□□□□ -0.35
USHBP1-203ENST00000431146 ASCL2Q99929 193 aa12.89□□□□□ -0.35
USHBP1-203ENST00000431146 SERTAD4Q9NUC0 356 aa12.89□□□□□ -0.35
USHBP1-203ENST00000431146 IL36BQ9NZH7 164 aa12.89□□□□□ -0.35
USHBP1-203ENST00000431146 KLF12Q9Y4X4 402 aa12.89□□□□□ -0.35
USHBP1-203ENST00000431146 CA1P00915 261 aaPredicted RBP12.88□□□□□ -0.35
USHBP1-203ENST00000431146 PRSS57Q6UWY2 283 aa12.88□□□□□ -0.35
USHBP1-203ENST00000431146 SMAD5-AS1Q9Y6J3 95 aa12.88□□□□□ -0.35
USHBP1-203ENST00000431146 CLPSL1A2RUU4 121 aa12.88□□□□□ -0.35
USHBP1-203ENST00000431146 PHOX2AO14813 284 aa12.88□□□□□ -0.35
USHBP1-203ENST00000431146 APOHP02749 345 aaPredicted RBP12.88□□□□□ -0.35
USHBP1-203ENST00000431146 TRGC1P0CF51 173 aa12.88□□□□□ -0.35
USHBP1-203ENST00000431146 IGFL4Q6B9Z1 124 aa12.88□□□□□ -0.35
USHBP1-203ENST00000431146 IL17RELQ6ZVW7 336 aa12.88□□□□□ -0.35
USHBP1-203ENST00000431146 IMMP2LQ96T52 175 aa12.88□□□□□ -0.35
USHBP1-203ENST00000431146 SNHG12Q9BXW3 62 aa12.88□□□□□ -0.35
USHBP1-203ENST00000431146 UNC79Q9P2D8 2635 aa12.88□□□□□ -0.35
USHBP1-203ENST00000431146 TCL1AP56279 114 aa12.87□□□□□ -0.35
USHBP1-203ENST00000431146 NDUFA6P56556 154 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms