RNA–Protein interactions for RNA: ENST00000430687.1

CDC42EP1-203, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-203ENST00000430687 DEFB125Q8N687 156 aa13.46□□□□□ -0.25
CDC42EP1-203ENST00000430687 SLC50A1Q9BRV3 221 aa13.46□□□□□ -0.25
CDC42EP1-203ENST00000430687 ACTR3CQ9C0K3 210 aaPredicted RBP13.46□□□□□ -0.25
CDC42EP1-203ENST00000430687 TUBA4BQ9H853 241 aa13.46□□□□□ -0.25
CDC42EP1-203ENST00000430687 RPRMQ9NS64 109 aa13.46□□□□□ -0.25
CDC42EP1-203ENST00000430687 CLEC5AQ9NY25 188 aa13.46□□□□□ -0.25
CDC42EP1-203ENST00000430687 DNAH3Q8TD57 4116 aa13.46□□□□□ -0.26
CDC42EP1-203ENST00000430687 UMAD1C9J7I0 102 aa13.45□□□□□ -0.26
CDC42EP1-203ENST00000430687 H3BQ15 152 aa13.45□□□□□ -0.26
CDC42EP1-203ENST00000430687 PDE6HQ13956 83 aa13.45□□□□□ -0.26
CDC42EP1-203ENST00000430687 PQLC2Q6ZP29 291 aa13.45□□□□□ -0.26
CDC42EP1-203ENST00000430687 LRRC20Q8TCA0 184 aa13.45□□□□□ -0.26
CDC42EP1-203ENST00000430687 PAXXQ9BUH6 204 aa13.45□□□□□ -0.26
CDC42EP1-203ENST00000430687 SRD5A3Q9H8P0 318 aa13.45□□□□□ -0.26
CDC42EP1-203ENST00000430687 SORL1Q92673 2214 aa13.45□□□□□ -0.26
CDC42EP1-203ENST00000430687 TRBV19A0A075B6N1 114 aa13.44□□□□□ -0.26
CDC42EP1-203ENST00000430687 OR7C2O60412 319 aa13.44□□□□□ -0.26
CDC42EP1-203ENST00000430687 PSMG4Q5JS54 123 aa13.44□□□□□ -0.26
CDC42EP1-203ENST00000430687 RNF141Q8WVD5 230 aa13.44□□□□□ -0.26
CDC42EP1-203ENST00000430687 RAB24Q969Q5 203 aa13.44□□□□□ -0.26
CDC42EP1-203ENST00000430687 SAT2Q96F10 170 aaPredicted RBP13.44□□□□□ -0.26
CDC42EP1-203ENST00000430687 WFDC10AQ9H1F0 79 aa13.44□□□□□ -0.26
CDC42EP1-203ENST00000430687 ZNF331Q9NQX6 463 aaPredicted RBP13.44□□□□□ -0.26
CDC42EP1-203ENST00000430687 ZNF586Q9NXT0 402 aa13.44□□□□□ -0.26
CDC42EP1-203ENST00000430687 MEGF8Q7Z7M0 2845 aa13.43□□□□□ -0.26
CDC42EP1-203ENST00000430687 TRAV8-2A0A0B4J237 113 aa13.43□□□□□ -0.26
CDC42EP1-203ENST00000430687 NBEAP1P0C6P0 100 aa13.43□□□□□ -0.26
CDC42EP1-203ENST00000430687 STAG3L2P0CL84 134 aa13.43□□□□□ -0.26
CDC42EP1-203ENST00000430687 STAG3L3P0CL85 134 aa13.43□□□□□ -0.26
CDC42EP1-203ENST00000430687 PYYP10082 97 aa13.43□□□□□ -0.26
CDC42EP1-203ENST00000430687 APRG1Q8IVJ8 170 aa13.43□□□□□ -0.26
CDC42EP1-203ENST00000430687 FXYD5Q96DB9 178 aa13.43□□□□□ -0.26
CDC42EP1-203ENST00000430687 LINC00052Q96N35 136 aa13.43□□□□□ -0.26
CDC42EP1-203ENST00000430687 CITED4Q96RK1 184 aa13.43□□□□□ -0.26
CDC42EP1-203ENST00000430687 PSG9Q00887 426 aa13.42□□□□□ -0.26
CDC42EP1-203ENST00000430687 DPPA3Q6W0C5 159 aa13.42□□□□□ -0.26
CDC42EP1-203ENST00000430687 LINC00322Q6ZN03 302 aaPredicted RBP13.42□□□□□ -0.26
CDC42EP1-203ENST00000430687 ZNF503Q96F45 646 aa13.42□□□□□ -0.26
CDC42EP1-203ENST00000430687 CTXND1A0A1B0GTU2 59 aa13.41□□□□□ -0.26
CDC42EP1-203ENST00000430687 FRMD6-AS1P0C7T7 363 aa13.41□□□□□ -0.26
CDC42EP1-203ENST00000430687 NKX2-5P52952 324 aaPredicted RBP13.41□□□□□ -0.26
CDC42EP1-203ENST00000430687 UBE2L3P68036 154 aaKnown RBP13.41□□□□□ -0.26
CDC42EP1-203ENST00000430687 TMED6Q8WW62 240 aa13.41□□□□□ -0.26
CDC42EP1-203ENST00000430687 CXorf1O96002 111 aa13.4□□□□□ -0.26
CDC42EP1-203ENST00000430687 SNRPCP09234 159 aaKnown RBP13.4□□□□□ -0.26
CDC42EP1-203ENST00000430687 OR10J4P0C629 311 aa13.4□□□□□ -0.26
CDC42EP1-203ENST00000430687 RAB5CP51148 216 aa13.4□□□□□ -0.26
CDC42EP1-203ENST00000430687 PSG3Q16557 428 aa13.4□□□□□ -0.26
CDC42EP1-203ENST00000430687 FOXI2Q6ZQN5 318 aa13.4□□□□□ -0.26
CDC42EP1-203ENST00000430687 LYPD1Q8N2G4 141 aa13.4□□□□□ -0.26
CDC42EP1-203ENST00000430687 LOC102724200A0A096LPH7 203 aaPredicted RBP13.39□□□□□ -0.27
CDC42EP1-203ENST00000430687 RBMY1BA6NDE4 496 aaKnown RBP13.39□□□□□ -0.27
CDC42EP1-203ENST00000430687 RBMY1EA6NEQ0 496 aaKnown RBP13.39□□□□□ -0.27
CDC42EP1-203ENST00000430687 H3BTX0 84 aa13.39□□□□□ -0.27
CDC42EP1-203ENST00000430687 SLC17A3O00476 420 aa13.39□□□□□ -0.27
CDC42EP1-203ENST00000430687 NDUFB4O95168 129 aa13.39□□□□□ -0.27
CDC42EP1-203ENST00000430687 RBMY1DP0C7P1 496 aaKnown RBP13.39□□□□□ -0.27
CDC42EP1-203ENST00000430687 ZNF726P1Q15940 193 aa13.39□□□□□ -0.27
CDC42EP1-203ENST00000430687 ZNF124Q15973 351 aa13.39□□□□□ -0.27
CDC42EP1-203ENST00000430687 STHQ8IWL8 128 aa13.39□□□□□ -0.27
CDC42EP1-203ENST00000430687 BLNKQ8WV28 456 aa13.39□□□□□ -0.27
CDC42EP1-203ENST00000430687 MRPL53Q96EL3 112 aaKnown RBP13.39□□□□□ -0.27
CDC42EP1-203ENST00000430687 PHYHIPLQ96FC7 376 aa13.39□□□□□ -0.27
CDC42EP1-203ENST00000430687 C20orf173Q96LM9 149 aa13.39□□□□□ -0.27
CDC42EP1-203ENST00000430687 B9D2Q9BPU9 175 aa13.39□□□□□ -0.27
CDC42EP1-203ENST00000430687 SAV1Q9H4B6 383 aaPredicted RBP13.39□□□□□ -0.27
CDC42EP1-203ENST00000430687 AAMDCQ9H7C9 122 aa13.39□□□□□ -0.27
CDC42EP1-203ENST00000430687 PLA2G2EQ9NZK7 142 aa13.39□□□□□ -0.27
CDC42EP1-203ENST00000430687 PRELID1Q9Y255 219 aa13.39□□□□□ -0.27
CDC42EP1-203ENST00000430687 HMGB3O15347 200 aaKnown RBP13.38□□□□□ -0.27
CDC42EP1-203ENST00000430687 ARL14EPLP0DKL9 152 aa13.38□□□□□ -0.27
CDC42EP1-203ENST00000430687 IGFL4Q6B9Z1 124 aa13.38□□□□□ -0.27
CDC42EP1-203ENST00000430687 EBLN2Q6P2I7 272 aa13.38□□□□□ -0.27
CDC42EP1-203ENST00000430687 RNF182Q8N6D2 247 aa13.38□□□□□ -0.27
CDC42EP1-203ENST00000430687 SUN5Q8TC36 379 aa13.38□□□□□ -0.27
CDC42EP1-203ENST00000430687 CLUHP3Q96NS8 147 aa13.38□□□□□ -0.27
CDC42EP1-203ENST00000430687 TMEM167BQ9NRX6 74 aa13.38□□□□□ -0.27
CDC42EP1-203ENST00000430687 KIR2DL5BA0A0G2JN68 375 aa13.37□□□□□ -0.27
CDC42EP1-203ENST00000430687 KIR2DL5BA0A0G2JPC4 375 aa13.37□□□□□ -0.27
CDC42EP1-203ENST00000430687 KNCNA6PVL3 124 aa13.37□□□□□ -0.27
CDC42EP1-203ENST00000430687 EIF3GO75821 320 aaKnown RBP eCLIP13.37□□□□□ -0.27
CDC42EP1-203ENST00000430687 HLA-DRB4P13762 266 aa13.37□□□□□ -0.27
CDC42EP1-203ENST00000430687 GCHFRP30047 84 aa13.37□□□□□ -0.27
CDC42EP1-203ENST00000430687 ACTL10Q5JWF8 245 aa13.37□□□□□ -0.27
CDC42EP1-203ENST00000430687 SSX7Q7RTT5 188 aa13.37□□□□□ -0.27
CDC42EP1-203ENST00000430687 TRPT1Q86TN4 253 aaKnown RBP13.37□□□□□ -0.27
CDC42EP1-203ENST00000430687 KIR2DL5AQ8N109 375 aa13.37□□□□□ -0.27
CDC42EP1-203ENST00000430687 ZNF738Q8NE65 137 aa13.37□□□□□ -0.27
CDC42EP1-203ENST00000430687 KIR2DL5BQ8NHK3 375 aa13.37□□□□□ -0.27
CDC42EP1-203ENST00000430687 HLA-DRB4X5D2U9 266 aa13.37□□□□□ -0.27
CDC42EP1-203ENST00000430687 A0A0J9YX75 114 aa13.36□□□□□ -0.27
CDC42EP1-203ENST00000430687 H3BMM0 161 aa13.36□□□□□ -0.27
CDC42EP1-203ENST00000430687 HLA-DMBP28068 263 aa13.36□□□□□ -0.27
CDC42EP1-203ENST00000430687 SULT1A2P50226 295 aa13.36□□□□□ -0.27
CDC42EP1-203ENST00000430687 APOC4P55056 127 aa13.36□□□□□ -0.27
CDC42EP1-203ENST00000430687 FAM213BQ8TBF2 198 aa13.36□□□□□ -0.27
CDC42EP1-203ENST00000430687 MBD3L1Q8WWY6 194 aa13.36□□□□□ -0.27
CDC42EP1-203ENST00000430687 MAP1LC3B2A6NCE7 125 aa13.35□□□□□ -0.27
CDC42EP1-203ENST00000430687 UBE2CO00762 179 aa13.35□□□□□ -0.27
CDC42EP1-203ENST00000430687 DUSP14O95147 198 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms