RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 UBE2CO00762 179 aa11.06□□□□□ -0.64
GARNL3-204ENST00000429629 SEC11BP0C7V7 166 aa11.06□□□□□ -0.64
GARNL3-204ENST00000429629 C4BPBP20851 252 aa11.06□□□□□ -0.64
GARNL3-204ENST00000429629 PSMG4Q5JS54 123 aa11.06□□□□□ -0.64
GARNL3-204ENST00000429629 MIR17HGQ75NE6 70 aa11.06□□□□□ -0.64
GARNL3-204ENST00000429629 APRG1Q8IVJ8 170 aa11.06□□□□□ -0.64
GARNL3-204ENST00000429629 RPP25LQ8N5L8 163 aaKnown RBP11.06□□□□□ -0.64
GARNL3-204ENST00000429629 SLC25A2Q9BXI2 301 aa11.06□□□□□ -0.64
GARNL3-204ENST00000429629 OR51M1Q9H341 326 aa11.06□□□□□ -0.64
GARNL3-204ENST00000429629 ZNF331Q9NQX6 463 aaPredicted RBP11.06□□□□□ -0.64
GARNL3-204ENST00000429629 RPRMQ9NS64 109 aa11.06□□□□□ -0.64
GARNL3-204ENST00000429629 TRBV19A0A075B6N1 114 aa11.05□□□□□ -0.64
GARNL3-204ENST00000429629 H3BQ15 152 aa11.05□□□□□ -0.64
GARNL3-204ENST00000429629 KHDC3LQ587J8 217 aa11.05□□□□□ -0.64
GARNL3-204ENST00000429629 PQLC2Q6ZP29 291 aa11.05□□□□□ -0.64
GARNL3-204ENST00000429629 FOXI2Q6ZQN5 318 aa11.05□□□□□ -0.64
GARNL3-204ENST00000429629 STOML3Q8TAV4 291 aa11.05□□□□□ -0.64
GARNL3-204ENST00000429629 LRRC20Q8TCA0 184 aa11.05□□□□□ -0.64
GARNL3-204ENST00000429629 WFDC10AQ9H1F0 79 aa11.05□□□□□ -0.64
GARNL3-204ENST00000429629 PRKDCP78527 4128 aaKnown RBP11.04□□□□□ -0.64
GARNL3-204ENST00000429629 TRAV8-2A0A0B4J237 113 aa11.04□□□□□ -0.64
GARNL3-204ENST00000429629 UMAD1C9J7I0 102 aa11.04□□□□□ -0.64
GARNL3-204ENST00000429629 PFDN1O60925 122 aa11.04□□□□□ -0.64
GARNL3-204ENST00000429629 NBEAP1P0C6P0 100 aa11.04□□□□□ -0.64
GARNL3-204ENST00000429629 APOC4P55056 127 aa11.04□□□□□ -0.64
GARNL3-204ENST00000429629 PSG9Q00887 426 aa11.04□□□□□ -0.64
GARNL3-204ENST00000429629 PSG3Q16557 428 aa11.04□□□□□ -0.64
GARNL3-204ENST00000429629 HAGHQ16775 308 aa11.04□□□□□ -0.64
GARNL3-204ENST00000429629 ZFP69Q49AA0 526 aa11.04□□□□□ -0.64
GARNL3-204ENST00000429629 TMEM41BQ5BJD5 291 aa11.04□□□□□ -0.64
GARNL3-204ENST00000429629 STHQ8IWL8 128 aa11.04□□□□□ -0.64
GARNL3-204ENST00000429629 BAP18Q8IXM2 172 aa11.04□□□□□ -0.64
GARNL3-204ENST00000429629 LYPD1Q8N2G4 141 aa11.04□□□□□ -0.64
GARNL3-204ENST00000429629 PAXXQ9BUH6 204 aa11.04□□□□□ -0.64
GARNL3-204ENST00000429629 ZNF471Q9BX82 626 aaPredicted RBP11.04□□□□□ -0.64
GARNL3-204ENST00000429629 ACTR3CQ9C0K3 210 aaPredicted RBP11.04□□□□□ -0.64
GARNL3-204ENST00000429629 SH3BGRL3Q9H299 93 aa11.04□□□□□ -0.64
GARNL3-204ENST00000429629 ZNF586Q9NXT0 402 aa11.04□□□□□ -0.64
GARNL3-204ENST00000429629 RFNGQ9Y644 331 aa11.04□□□□□ -0.64
GARNL3-204ENST00000429629 H3BMM0 161 aa11.03□□□□□ -0.64
GARNL3-204ENST00000429629 STAG3L2P0CL84 134 aa11.03□□□□□ -0.64
GARNL3-204ENST00000429629 STAG3L3P0CL85 134 aa11.03□□□□□ -0.64
GARNL3-204ENST00000429629 TPT1P13693 172 aaKnown RBP11.03□□□□□ -0.64
GARNL3-204ENST00000429629 HLA-DRB4P13762 266 aa11.03□□□□□ -0.64
GARNL3-204ENST00000429629 RAB2AP61019 212 aa11.03□□□□□ -0.64
GARNL3-204ENST00000429629 EIF5AL1Q6IS14 154 aaKnown RBP11.03□□□□□ -0.64
GARNL3-204ENST00000429629 MORN3Q6PF18 240 aaPredicted RBP11.03□□□□□ -0.64
GARNL3-204ENST00000429629 TRPT1Q86TN4 253 aaKnown RBP11.03□□□□□ -0.64
GARNL3-204ENST00000429629 SBSPONQ8IVN8 264 aa11.03□□□□□ -0.64
GARNL3-204ENST00000429629 RNF141Q8WVD5 230 aa11.03□□□□□ -0.64
GARNL3-204ENST00000429629 FXYD5Q96DB9 178 aa11.03□□□□□ -0.64
GARNL3-204ENST00000429629 MRPL53Q96EL3 112 aaKnown RBP11.03□□□□□ -0.64
GARNL3-204ENST00000429629 LINC00052Q96N35 136 aa11.03□□□□□ -0.64
GARNL3-204ENST00000429629 TM2D3Q9BRN9 247 aa11.03□□□□□ -0.64
GARNL3-204ENST00000429629 CSTL1Q9H114 145 aa11.03□□□□□ -0.64
GARNL3-204ENST00000429629 SAV1Q9H4B6 383 aaPredicted RBP11.03□□□□□ -0.64
GARNL3-204ENST00000429629 PRELID1Q9Y255 219 aa11.03□□□□□ -0.64
GARNL3-204ENST00000429629 HLA-DRB4X5D2U9 266 aa11.03□□□□□ -0.64
GARNL3-204ENST00000429629 CDC34P49427 236 aaPredicted RBP11.02□□□□□ -0.65
GARNL3-204ENST00000429629 AKR1C8PQ5T2L2 129 aa11.02□□□□□ -0.65
GARNL3-204ENST00000429629 EBLN2Q6P2I7 272 aa11.02□□□□□ -0.65
GARNL3-204ENST00000429629 Q6ZWC4 215 aa11.02□□□□□ -0.65
GARNL3-204ENST00000429629 SLC51BQ86UW2 128 aa11.02□□□□□ -0.65
GARNL3-204ENST00000429629 ARL6IP6Q8N6S5 226 aa11.02□□□□□ -0.65
GARNL3-204ENST00000429629 SUN5Q8TC36 379 aa11.02□□□□□ -0.65
GARNL3-204ENST00000429629 RAB24Q969Q5 203 aa11.02□□□□□ -0.65
GARNL3-204ENST00000429629 ZNF503Q96F45 646 aa11.02□□□□□ -0.65
GARNL3-204ENST00000429629 A8MTW9 85 aa11.01□□□□□ -0.65
GARNL3-204ENST00000429629 OR7C2O60412 319 aa11.01□□□□□ -0.65
GARNL3-204ENST00000429629 DUSP14O95147 198 aaKnown RBP11.01□□□□□ -0.65
GARNL3-204ENST00000429629 NDUFB4O95168 129 aa11.01□□□□□ -0.65
GARNL3-204ENST00000429629 CD300CQ08708 224 aa11.01□□□□□ -0.65
GARNL3-204ENST00000429629 ZNF124Q15973 351 aa11.01□□□□□ -0.65
GARNL3-204ENST00000429629 ACTL10Q5JWF8 245 aa11.01□□□□□ -0.65
GARNL3-204ENST00000429629 FAM122CQ6P4D5 195 aa11.01□□□□□ -0.65
GARNL3-204ENST00000429629 DPPA3Q6W0C5 159 aa11.01□□□□□ -0.65
GARNL3-204ENST00000429629 C9orf62Q8N4C0 152 aa11.01□□□□□ -0.65
GARNL3-204ENST00000429629 C20orf173Q96LM9 149 aa11.01□□□□□ -0.65
GARNL3-204ENST00000429629 TP53TG1Q9Y2A0 90 aa11.01□□□□□ -0.65
GARNL3-204ENST00000429629 A0A0J9YX75 114 aa11□□□□□ -0.65
GARNL3-204ENST00000429629 PYYP10082 97 aa11□□□□□ -0.65
GARNL3-204ENST00000429629 NUTF2P61970 127 aaKnown RBP11□□□□□ -0.65
GARNL3-204ENST00000429629 SPATA25Q9BR10 227 aa11□□□□□ -0.65
GARNL3-204ENST00000429629 ZMAT4Q9H898 229 aa11□□□□□ -0.65
GARNL3-204ENST00000429629 DNAH9Q9NYC9 4486 aa10.99□□□□□ -0.65
GARNL3-204ENST00000429629 CTXND1A0A1B0GTU2 59 aa10.99□□□□□ -0.65
GARNL3-204ENST00000429629 KNCNA6PVL3 124 aa10.99□□□□□ -0.65
GARNL3-204ENST00000429629 SLC17A3O00476 420 aa10.99□□□□□ -0.65
GARNL3-204ENST00000429629 CXorf1O96002 111 aa10.99□□□□□ -0.65
GARNL3-204ENST00000429629 RAB5CP51148 216 aa10.99□□□□□ -0.65
GARNL3-204ENST00000429629 RPUSD4Q96CM3 377 aaKnown RBP10.99□□□□□ -0.65
GARNL3-204ENST00000429629 AAMDCQ9H7C9 122 aa10.99□□□□□ -0.65
GARNL3-204ENST00000429629 TMEM167BQ9NRX6 74 aa10.99□□□□□ -0.65
GARNL3-204ENST00000429629 UBE2L3P68036 154 aaKnown RBP10.98□□□□□ -0.65
GARNL3-204ENST00000429629 RNF182Q8N6D2 247 aa10.98□□□□□ -0.65
GARNL3-204ENST00000429629 ZNF738Q8NE65 137 aa10.98□□□□□ -0.65
GARNL3-204ENST00000429629 OR8A1Q8NGG7 326 aa10.98□□□□□ -0.65
GARNL3-204ENST00000429629 C1QTNF4Q9BXJ3 329 aa10.98□□□□□ -0.65
GARNL3-204ENST00000429629 OR10J4P0C629 311 aa10.97□□□□□ -0.65
GARNL3-204ENST00000429629 RPL35AP18077 110 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms