RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 RAXQ9Y2V3 346 aa7.07□□□□□ -1.28
CDC42BPA-206ENST00000429440 PTPRBP23467 1997 aa7.07□□□□□ -1.28
CDC42BPA-206ENST00000429440 FREM2Q5SZK8 3169 aa7.07□□□□□ -1.28
CDC42BPA-206ENST00000429440 LOC107984156A0A0G2JMH3 177 aa7.07□□□□□ -1.28
CDC42BPA-206ENST00000429440 TRBV7-7A0A0K0K1E9 115 aa7.07□□□□□ -1.28
CDC42BPA-206ENST00000429440 UQCRQO14949 82 aa7.07□□□□□ -1.28
CDC42BPA-206ENST00000429440 DPM2O94777 84 aa7.07□□□□□ -1.28
CDC42BPA-206ENST00000429440 UBE2D1P51668 147 aa7.07□□□□□ -1.28
CDC42BPA-206ENST00000429440 PRSS12P56730 875 aa7.07□□□□□ -1.28
CDC42BPA-206ENST00000429440 C9orf153Q5TBE3 101 aa7.07□□□□□ -1.28
CDC42BPA-206ENST00000429440 LINC00322Q6ZN03 302 aaPredicted RBP7.07□□□□□ -1.28
CDC42BPA-206ENST00000429440 ZNF497Q6ZNH5 498 aa7.07□□□□□ -1.28
CDC42BPA-206ENST00000429440 ZNF493Q6ZR52 646 aa7.07□□□□□ -1.28
CDC42BPA-206ENST00000429440 PLXDC1Q8IUK5 500 aa7.07□□□□□ -1.28
CDC42BPA-206ENST00000429440 ARL17AQ8IVW1 177 aa7.07□□□□□ -1.28
CDC42BPA-206ENST00000429440 CACNA1DQ01668 2161 aa7.07□□□□□ -1.28
CDC42BPA-206ENST00000429440 DYSFO75923 2080 aa7.06□□□□□ -1.28
CDC42BPA-206ENST00000429440 CECR9P0C854 216 aa7.06□□□□□ -1.28
CDC42BPA-206ENST00000429440 MYCNOSP40205 109 aa7.06□□□□□ -1.28
CDC42BPA-206ENST00000429440 TWIST1Q15672 202 aa7.06□□□□□ -1.28
CDC42BPA-206ENST00000429440 ZC2HC1BQ5TFG8 222 aa7.06□□□□□ -1.28
CDC42BPA-206ENST00000429440 ZFP2Q6ZN57 461 aa7.06□□□□□ -1.28
CDC42BPA-206ENST00000429440 NFAM1Q8NET5 270 aaPredicted RBP7.06□□□□□ -1.28
CDC42BPA-206ENST00000429440 FAM57AQ8TBR7 257 aa7.06□□□□□ -1.28
CDC42BPA-206ENST00000429440 LINC00526Q96FQ7 95 aa7.06□□□□□ -1.28
CDC42BPA-206ENST00000429440 EPDR1Q9UM22 224 aa7.06□□□□□ -1.28
CDC42BPA-206ENST00000429440 KLF13Q9Y2Y9 288 aaPredicted RBP7.06□□□□□ -1.28
CDC42BPA-206ENST00000429440 EML6Q6ZMW3 1958 aa7.06□□□□□ -1.28
CDC42BPA-206ENST00000429440 IGLV3-12A0A075B6K2 115 aa7.06□□□□□ -1.28
CDC42BPA-206ENST00000429440 LINC01549A6NIU2 74 aa7.06□□□□□ -1.28
CDC42BPA-206ENST00000429440 K7ESF4 209 aa7.06□□□□□ -1.28
CDC42BPA-206ENST00000429440 TCL1BO95988 128 aa7.06□□□□□ -1.28
CDC42BPA-206ENST00000429440 ORM1P02763 201 aa7.06□□□□□ -1.28
CDC42BPA-206ENST00000429440 FCER1GP30273 86 aa7.06□□□□□ -1.28
CDC42BPA-206ENST00000429440 UTF1Q5T230 341 aa7.06□□□□□ -1.28
CDC42BPA-206ENST00000429440 MAPKAPK5-AS1Q8N8E1 139 aa7.06□□□□□ -1.28
CDC42BPA-206ENST00000429440 FGFBP3Q8TAT2 258 aa7.06□□□□□ -1.28
CDC42BPA-206ENST00000429440 ITLN1Q8WWA0 313 aa7.06□□□□□ -1.28
CDC42BPA-206ENST00000429440 NPIPB3Q92617 1050 aa7.06□□□□□ -1.28
CDC42BPA-206ENST00000429440 DUX3Q96PT4 197 aa7.06□□□□□ -1.28
CDC42BPA-206ENST00000429440 CHCHD5Q9BSY4 110 aa7.06□□□□□ -1.28
CDC42BPA-206ENST00000429440 MED12Q93074 2177 aa7.06□□□□□ -1.28
CDC42BPA-206ENST00000429440 LY6G6EA0A0G2JKS1 128 aa7.05□□□□□ -1.28
CDC42BPA-206ENST00000429440 ATP5LO75964 103 aa7.05□□□□□ -1.28
CDC42BPA-206ENST00000429440 FKBP2P26885 142 aaKnown RBP7.05□□□□□ -1.28
CDC42BPA-206ENST00000429440 GTSCR1Q86UQ5 136 aa7.05□□□□□ -1.28
CDC42BPA-206ENST00000429440 C10orf126Q8N4M7 172 aa7.05□□□□□ -1.28
CDC42BPA-206ENST00000429440 C3orf56Q8N813 242 aa7.05□□□□□ -1.28
CDC42BPA-206ENST00000429440 RNF138Q8WVD3 245 aa7.05□□□□□ -1.28
CDC42BPA-206ENST00000429440 FMC1Q96HJ9 113 aa7.05□□□□□ -1.28
CDC42BPA-206ENST00000429440 IMUPQ9GZP8 106 aa7.05□□□□□ -1.28
CDC42BPA-206ENST00000429440 PRO3102Q9H379 93 aa7.05□□□□□ -1.28
CDC42BPA-206ENST00000429440 U3KQA8 63 aa7.05□□□□□ -1.28
CDC42BPA-206ENST00000429440 TRAV8-1A0A0A6YYK1 113 aa7.05□□□□□ -1.28
CDC42BPA-206ENST00000429440 SLC25A20O43772 301 aa7.05□□□□□ -1.28
CDC42BPA-206ENST00000429440 RPL13AP40429 203 aaKnown RBP7.05□□□□□ -1.28
CDC42BPA-206ENST00000429440 GATA4P43694 442 aa7.05□□□□□ -1.28
CDC42BPA-206ENST00000429440 HSPE1P61604 102 aaKnown RBP7.05□□□□□ -1.28
CDC42BPA-206ENST00000429440 FOXC1Q12948 553 aa7.05□□□□□ -1.28
CDC42BPA-206ENST00000429440 TEX36Q5VZQ5 186 aa7.05□□□□□ -1.28
CDC42BPA-206ENST00000429440 MYOZ3Q8TDC0 251 aa7.05□□□□□ -1.28
CDC42BPA-206ENST00000429440 TMEM190Q8WZ59 177 aa7.05□□□□□ -1.28
CDC42BPA-206ENST00000429440 MSRB2Q9Y3D2 182 aa7.05□□□□□ -1.28
CDC42BPA-206ENST00000429440 TNRC6BQ9UPQ9 1833 aaKnown RBP7.05□□□□□ -1.28
CDC42BPA-206ENST00000429440 TMSB15BA0A087X1C1 80 aa7.04□□□□□ -1.28
CDC42BPA-206ENST00000429440 TRAV2A0A0B4J234 112 aa7.04□□□□□ -1.28
CDC42BPA-206ENST00000429440 TRAV8-4A0A0B4J246 113 aa7.04□□□□□ -1.28
CDC42BPA-206ENST00000429440 LINC01546A6NGU7 62 aa7.04□□□□□ -1.28
CDC42BPA-206ENST00000429440 OOSP1A8MZH6 123 aa7.04□□□□□ -1.28
CDC42BPA-206ENST00000429440 ORMDL3Q8N138 153 aa7.04□□□□□ -1.28
CDC42BPA-206ENST00000429440 FGF23Q9GZV9 251 aaPredicted RBP7.04□□□□□ -1.28
CDC42BPA-206ENST00000429440 LOC389332A0A1B0GUA5 103 aa7.04□□□□□ -1.28
CDC42BPA-206ENST00000429440 A0A1W2PNR3 127 aa7.04□□□□□ -1.28
CDC42BPA-206ENST00000429440 H3BVH4 76 aa7.04□□□□□ -1.28
CDC42BPA-206ENST00000429440 CRYGDP07320 174 aa7.04□□□□□ -1.28
CDC42BPA-206ENST00000429440 Q8N1Y9 231 aa7.04□□□□□ -1.28
CDC42BPA-206ENST00000429440 OR4C13Q8NGP0 309 aa7.04□□□□□ -1.28
CDC42BPA-206ENST00000429440 PAXXQ9BUH6 204 aa7.04□□□□□ -1.28
CDC42BPA-206ENST00000429440 EDA2RQ9HAV5 297 aa7.04□□□□□ -1.28
CDC42BPA-206ENST00000429440 NCBP2LA6PVI3 153 aaKnown RBP7.03□□□□□ -1.28
CDC42BPA-206ENST00000429440 ATP5G1P05496 136 aa7.03□□□□□ -1.28
CDC42BPA-206ENST00000429440 EDDM3AQ14507 147 aa7.03□□□□□ -1.28
CDC42BPA-206ENST00000429440 FAM240AA0A1B0GVK7 77 aa7.03□□□□□ -1.28
CDC42BPA-206ENST00000429440 LINC00473A8K010 186 aa7.03□□□□□ -1.28
CDC42BPA-206ENST00000429440 D6R8Y8 96 aa7.03□□□□□ -1.28
CDC42BPA-206ENST00000429440 CD7P09564 240 aa7.03□□□□□ -1.28
CDC42BPA-206ENST00000429440 ARMS2P0C7Q2 107 aa7.03□□□□□ -1.28
CDC42BPA-206ENST00000429440 C11orf53Q8IXP5 236 aa7.03□□□□□ -1.28
CDC42BPA-206ENST00000429440 PRDM14Q9GZV8 571 aa7.03□□□□□ -1.28
CDC42BPA-206ENST00000429440 CALYQ9NYX4 217 aa7.03□□□□□ -1.28
CDC42BPA-206ENST00000429440 CHCHD2Q9Y6H1 151 aaPredicted RBP7.03□□□□□ -1.28
CDC42BPA-206ENST00000429440 IGHV3OR15-7A0A075B7D8 119 aa7.02□□□□□ -1.29
CDC42BPA-206ENST00000429440 IGLV3-32A0A0A0MS00 114 aa7.02□□□□□ -1.29
CDC42BPA-206ENST00000429440 TIMM23O14925 209 aa7.02□□□□□ -1.29
CDC42BPA-206ENST00000429440 TNFRSF6BO95407 300 aa7.02□□□□□ -1.29
CDC42BPA-206ENST00000429440 PRSS1P07477 247 aa7.02□□□□□ -1.29
CDC42BPA-206ENST00000429440 FAM104BQ5XKR9 115 aa7.02□□□□□ -1.29
CDC42BPA-206ENST00000429440 GUSBP11Q6P575 273 aa7.02□□□□□ -1.29
CDC42BPA-206ENST00000429440 TIMD4Q96H15 378 aa7.02□□□□□ -1.29
CDC42BPA-206ENST00000429440 AAMDCQ9H7C9 122 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms