RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 KANTRA0A1W2PQU2 76 aa16.47■□□□□ 0.23
PTPN18-205ENST00000428843 BCL2L11O43521 198 aa16.47■□□□□ 0.23
PTPN18-205ENST00000428843 ACTL10Q5JWF8 245 aa16.47■□□□□ 0.23
PTPN18-205ENST00000428843 LCN15Q6UWW0 184 aa16.47■□□□□ 0.23
PTPN18-205ENST00000428843 RNF182Q8N6D2 247 aa16.47■□□□□ 0.23
PTPN18-205ENST00000428843 OR10G4Q8NGN3 311 aa16.47■□□□□ 0.23
PTPN18-205ENST00000428843 OR10G9Q8NGN4 311 aa16.47■□□□□ 0.23
PTPN18-205ENST00000428843 OR10G7Q8NGN6 311 aa16.47■□□□□ 0.23
PTPN18-205ENST00000428843 ZNF586Q9NXT0 402 aa16.47■□□□□ 0.23
PTPN18-205ENST00000428843 HIST1H1EP10412 219 aaKnown RBP16.46■□□□□ 0.23
PTPN18-205ENST00000428843 DEFB1P60022 68 aa16.46■□□□□ 0.23
PTPN18-205ENST00000428843 GUK1Q16774 197 aa16.46■□□□□ 0.23
PTPN18-205ENST00000428843 FAM122CQ6P4D5 195 aa16.46■□□□□ 0.23
PTPN18-205ENST00000428843 STHQ8IWL8 128 aa16.46■□□□□ 0.23
PTPN18-205ENST00000428843 HYLS1Q96M11 299 aa16.46■□□□□ 0.23
PTPN18-205ENST00000428843 OR51M1Q9H341 326 aa16.46■□□□□ 0.23
PTPN18-205ENST00000428843 ZNF331Q9NQX6 463 aaPredicted RBP16.46■□□□□ 0.23
PTPN18-205ENST00000428843 A0A1W2PPV4 95 aa16.45■□□□□ 0.22
PTPN18-205ENST00000428843 SLC17A3O00476 420 aa16.45■□□□□ 0.22
PTPN18-205ENST00000428843 PFDN1O60925 122 aa16.45■□□□□ 0.22
PTPN18-205ENST00000428843 EIF3GO75821 320 aaKnown RBP eCLIP16.45■□□□□ 0.22
PTPN18-205ENST00000428843 HLA-DMBP28068 263 aa16.45■□□□□ 0.22
PTPN18-205ENST00000428843 LGALSLQ3ZCW2 172 aaPredicted RBP16.45■□□□□ 0.22
PTPN18-205ENST00000428843 SAT2Q96F10 170 aaPredicted RBP16.45■□□□□ 0.22
PTPN18-205ENST00000428843 SLC50A1Q9BRV3 221 aa16.45■□□□□ 0.22
PTPN18-205ENST00000428843 PAXXQ9BUH6 204 aa16.45■□□□□ 0.22
PTPN18-205ENST00000428843 ZNF471Q9BX82 626 aaPredicted RBP16.45■□□□□ 0.22
PTPN18-205ENST00000428843 RPRMQ9NS64 109 aa16.45■□□□□ 0.22
PTPN18-205ENST00000428843 MBP02144 154 aa16.44■□□□□ 0.22
PTPN18-205ENST00000428843 NHLRC4P0CG21 123 aaPredicted RBP16.44■□□□□ 0.22
PTPN18-205ENST00000428843 TAS2R45P59539 299 aa16.44■□□□□ 0.22
PTPN18-205ENST00000428843 KHDC3LQ587J8 217 aa16.44■□□□□ 0.22
PTPN18-205ENST00000428843 TRPT1Q86TN4 253 aaKnown RBP16.44■□□□□ 0.22
PTPN18-205ENST00000428843 ZNF503Q96F45 646 aa16.44■□□□□ 0.22
PTPN18-205ENST00000428843 TM2D3Q9BRN9 247 aa16.44■□□□□ 0.22
PTPN18-205ENST00000428843 DNAH9Q9NYC9 4486 aa16.43■□□□□ 0.22
PTPN18-205ENST00000428843 TRBV19A0A075B6N1 114 aa16.43■□□□□ 0.22
PTPN18-205ENST00000428843 KIR2DL5BA0A0G2JN68 375 aa16.43■□□□□ 0.22
PTPN18-205ENST00000428843 KIR2DL5BA0A0G2JPC4 375 aa16.43■□□□□ 0.22
PTPN18-205ENST00000428843 OR7C2O60412 319 aa16.43■□□□□ 0.22
PTPN18-205ENST00000428843 SPP1P10451 314 aa16.43■□□□□ 0.22
PTPN18-205ENST00000428843 APOC4P55056 127 aa16.43■□□□□ 0.22
PTPN18-205ENST00000428843 TMEM41BQ5BJD5 291 aa16.43■□□□□ 0.22
PTPN18-205ENST00000428843 GDF5OSQ5U4N7 250 aa16.43■□□□□ 0.22
PTPN18-205ENST00000428843 FOXI2Q6ZQN5 318 aa16.43■□□□□ 0.22
PTPN18-205ENST00000428843 KIR2DL5AQ8N109 375 aa16.43■□□□□ 0.22
PTPN18-205ENST00000428843 RPP25LQ8N5L8 163 aaKnown RBP16.43■□□□□ 0.22
PTPN18-205ENST00000428843 KIR2DL5BQ8NHK3 375 aa16.43■□□□□ 0.22
PTPN18-205ENST00000428843 SAV1Q9H4B6 383 aaPredicted RBP16.43■□□□□ 0.22
PTPN18-205ENST00000428843 F6UB75 175 aa16.42■□□□□ 0.22
PTPN18-205ENST00000428843 H3BMM0 161 aa16.42■□□□□ 0.22
PTPN18-205ENST00000428843 OR10J4P0C629 311 aa16.42■□□□□ 0.22
PTPN18-205ENST00000428843 HLA-DRB4P13762 266 aa16.42■□□□□ 0.22
PTPN18-205ENST00000428843 CDC34P49427 236 aaPredicted RBP16.42■□□□□ 0.22
PTPN18-205ENST00000428843 PSG3Q16557 428 aa16.42■□□□□ 0.22
PTPN18-205ENST00000428843 ZFP69Q49AA0 526 aa16.42■□□□□ 0.22
PTPN18-205ENST00000428843 ZNF738Q8NE65 137 aa16.42■□□□□ 0.22
PTPN18-205ENST00000428843 BLNKQ8WV28 456 aa16.42■□□□□ 0.22
PTPN18-205ENST00000428843 RNF141Q8WVD5 230 aa16.42■□□□□ 0.22
PTPN18-205ENST00000428843 FXYD5Q96DB9 178 aa16.42■□□□□ 0.22
PTPN18-205ENST00000428843 HLA-DRB4X5D2U9 266 aa16.42■□□□□ 0.22
PTPN18-205ENST00000428843 ZNF253O75346 499 aa16.41■□□□□ 0.22
PTPN18-205ENST00000428843 NDUFB4O95168 129 aa16.41■□□□□ 0.22
PTPN18-205ENST00000428843 NBEAP1P0C6P0 100 aa16.41■□□□□ 0.22
PTPN18-205ENST00000428843 HMGB3O15347 200 aaKnown RBP16.4■□□□□ 0.22
PTPN18-205ENST00000428843 PDE6HQ13956 83 aa16.4■□□□□ 0.22
PTPN18-205ENST00000428843 AKR1C8PQ5T2L2 129 aa16.4■□□□□ 0.22
PTPN18-205ENST00000428843 EBLN2Q6P2I7 272 aa16.4■□□□□ 0.22
PTPN18-205ENST00000428843 RAB24Q969Q5 203 aa16.4■□□□□ 0.22
PTPN18-205ENST00000428843 CSTL1Q9H114 145 aa16.4■□□□□ 0.22
PTPN18-205ENST00000428843 ZMAT4Q9H898 229 aa16.4■□□□□ 0.22
PTPN18-205ENST00000428843 A0A0J9YX75 114 aa16.39■□□□□ 0.21
PTPN18-205ENST00000428843 UBE2CO00762 179 aa16.39■□□□□ 0.21
PTPN18-205ENST00000428843 EIF5AP63241 154 aaKnown RBP16.39■□□□□ 0.21
PTPN18-205ENST00000428843 UBE2L3P68036 154 aaKnown RBP16.39■□□□□ 0.21
PTPN18-205ENST00000428843 PQLC2Q6ZP29 291 aa16.39■□□□□ 0.21
PTPN18-205ENST00000428843 SPATA25Q9BR10 227 aa16.39■□□□□ 0.21
PTPN18-205ENST00000428843 ACTR3CQ9C0K3 210 aaPredicted RBP16.39■□□□□ 0.21
PTPN18-205ENST00000428843 RETNQ9HD89 108 aa16.39■□□□□ 0.21
PTPN18-205ENST00000428843 PRB4P10163 310 aaPredicted RBP16.38■□□□□ 0.21
PTPN18-205ENST00000428843 BAP18Q8IXM2 172 aa16.38■□□□□ 0.21
PTPN18-205ENST00000428843 C9orf62Q8N4C0 152 aa16.38■□□□□ 0.21
PTPN18-205ENST00000428843 CLEC5AQ9NY25 188 aa16.38■□□□□ 0.21
PTPN18-205ENST00000428843 ZNF705FA8MVS1 300 aaPredicted RBP16.37■□□□□ 0.21
PTPN18-205ENST00000428843 CA1P00915 261 aaPredicted RBP16.37■□□□□ 0.21
PTPN18-205ENST00000428843 IGKV3-20P01619 116 aa16.37■□□□□ 0.21
PTPN18-205ENST00000428843 SEC11BP0C7V7 166 aa16.37■□□□□ 0.21
PTPN18-205ENST00000428843 ZNF705DP0CH99 300 aaPredicted RBP16.37■□□□□ 0.21
PTPN18-205ENST00000428843 ZNF705BP0CI00 300 aaPredicted RBP16.37■□□□□ 0.21
PTPN18-205ENST00000428843 STAG3L2P0CL84 134 aa16.37■□□□□ 0.21
PTPN18-205ENST00000428843 STAG3L3P0CL85 134 aa16.37■□□□□ 0.21
PTPN18-205ENST00000428843 TPT1P13693 172 aaKnown RBP16.37■□□□□ 0.21
PTPN18-205ENST00000428843 PSG9Q00887 426 aa16.37■□□□□ 0.21
PTPN18-205ENST00000428843 SSX7Q7RTT5 188 aa16.37■□□□□ 0.21
PTPN18-205ENST00000428843 OR4B1Q8NGF8 309 aa16.37■□□□□ 0.21
PTPN18-205ENST00000428843 STOML3Q8TAV4 291 aa16.37■□□□□ 0.21
PTPN18-205ENST00000428843 RPUSD4Q96CM3 377 aaKnown RBP16.37■□□□□ 0.21
PTPN18-205ENST00000428843 PLA2G2EQ9NZK7 142 aa16.37■□□□□ 0.21
PTPN18-205ENST00000428843 ARL14EPLP0DKL9 152 aa16.36■□□□□ 0.21
PTPN18-205ENST00000428843 ZNF726P1Q15940 193 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms