RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 A0A087X0K7 114 aa11.54□□□□□ -0.56
VARS-216ENST00000428445 C9orf170A2RU37 121 aa11.54□□□□□ -0.56
VARS-216ENST00000428445 SMCO3A2RU48 225 aa11.54□□□□□ -0.56
VARS-216ENST00000428445 BOLA2-SMG1P6H3BVE0 249 aa11.54□□□□□ -0.56
VARS-216ENST00000428445 K7EPK0 472 aa11.54□□□□□ -0.56
VARS-216ENST00000428445 CCNKO75909 580 aa11.54□□□□□ -0.56
VARS-216ENST00000428445 TAS2R30P59541 319 aa11.54□□□□□ -0.56
VARS-216ENST00000428445 DLK1P80370 383 aa11.54□□□□□ -0.56
VARS-216ENST00000428445 PARD6GQ9BYG4 376 aaPredicted RBP11.54□□□□□ -0.56
VARS-216ENST00000428445 CBY3A6NI87 242 aa11.53□□□□□ -0.56
VARS-216ENST00000428445 PMS2P5A8MQ11 134 aa11.53□□□□□ -0.56
VARS-216ENST00000428445 CDK2AP2O75956 126 aa11.53□□□□□ -0.56
VARS-216ENST00000428445 ATP5G1P05496 136 aa11.53□□□□□ -0.56
VARS-216ENST00000428445 ATP5G3P48201 142 aa11.53□□□□□ -0.56
VARS-216ENST00000428445 CCL18P55774 89 aa11.53□□□□□ -0.56
VARS-216ENST00000428445 POLR2GP62487 172 aaKnown RBP eCLIP11.53□□□□□ -0.56
VARS-216ENST00000428445 CNPY1Q3B7I2 92 aa11.53□□□□□ -0.56
VARS-216ENST00000428445 SPANXN2Q5MJ10 180 aa11.53□□□□□ -0.56
VARS-216ENST00000428445 SSX7Q7RTT5 188 aa11.53□□□□□ -0.56
VARS-216ENST00000428445 SPATA12Q7Z6I5 190 aa11.53□□□□□ -0.56
VARS-216ENST00000428445 OR8A1Q8NGG7 326 aa11.53□□□□□ -0.56
VARS-216ENST00000428445 KRTAP1-5Q9BYS1 174 aa11.53□□□□□ -0.56
VARS-216ENST00000428445 NOP10Q9NPE3 64 aaKnown RBP11.53□□□□□ -0.56
VARS-216ENST00000428445 OR5G3P0C626 314 aa11.52□□□□□ -0.57
VARS-216ENST00000428445 CXCL2P19875 107 aa11.52□□□□□ -0.57
VARS-216ENST00000428445 CXCL3P19876 107 aa11.52□□□□□ -0.57
VARS-216ENST00000428445 TAS2R60P59551 318 aa11.52□□□□□ -0.57
VARS-216ENST00000428445 RRAS2P62070 204 aaPredicted RBP11.52□□□□□ -0.57
VARS-216ENST00000428445 PSG3Q16557 428 aa11.52□□□□□ -0.57
VARS-216ENST00000428445 TMEM14EPQ6UXP3 125 aa11.52□□□□□ -0.57
VARS-216ENST00000428445 ZNF493Q6ZR52 646 aa11.52□□□□□ -0.57
VARS-216ENST00000428445 OR10P1Q8NGE3 313 aa11.52□□□□□ -0.57
VARS-216ENST00000428445 LRRC20Q8TCA0 184 aa11.52□□□□□ -0.57
VARS-216ENST00000428445 GGACTQ9BVM4 153 aa11.52□□□□□ -0.57
VARS-216ENST00000428445 PPP1R14DQ9NXH3 145 aa11.52□□□□□ -0.57
VARS-216ENST00000428445 A0A0J9YY99 117 aa11.51□□□□□ -0.57
VARS-216ENST00000428445 ADAP1O75689 374 aa11.51□□□□□ -0.57
VARS-216ENST00000428445 NDUFB6O95139 128 aa11.51□□□□□ -0.57
VARS-216ENST00000428445 LINC00869P0C866 280 aa11.51□□□□□ -0.57
VARS-216ENST00000428445 INPP1P49441 399 aa11.51□□□□□ -0.57
VARS-216ENST00000428445 OR5I1Q13606 314 aa11.51□□□□□ -0.57
VARS-216ENST00000428445 CLINT1Q14677 625 aa11.51□□□□□ -0.57
VARS-216ENST00000428445 TEPPQ6URK8 271 aa11.51□□□□□ -0.57
VARS-216ENST00000428445 PATE2Q6UY27 113 aa11.51□□□□□ -0.57
VARS-216ENST00000428445 C20orf144Q9BQM9 153 aa11.51□□□□□ -0.57
VARS-216ENST00000428445 Q9H8V8 135 aa11.51□□□□□ -0.57
VARS-216ENST00000428445 H3BTX0 84 aa11.5□□□□□ -0.57
VARS-216ENST00000428445 ZNF701M0R085 212 aaPredicted RBP11.5□□□□□ -0.57
VARS-216ENST00000428445 OR4E1P0C645 316 aa11.5□□□□□ -0.57
VARS-216ENST00000428445 KRTAP10-2P60368 255 aa11.5□□□□□ -0.57
VARS-216ENST00000428445 C16orf74Q96GX8 76 aa11.5□□□□□ -0.57
VARS-216ENST00000428445 MGAT4CQ9UBM8 478 aa11.5□□□□□ -0.57
VARS-216ENST00000428445 TIMM8BQ9Y5J9 83 aaPredicted RBP11.5□□□□□ -0.57
VARS-216ENST00000428445 CENPXA8MT69 81 aa11.49□□□□□ -0.57
VARS-216ENST00000428445 TSC22D2O75157 780 aa11.49□□□□□ -0.57
VARS-216ENST00000428445 ANXA7P20073 488 aaKnown RBP11.49□□□□□ -0.57
VARS-216ENST00000428445 CDKN1BP46527 198 aa11.49□□□□□ -0.57
VARS-216ENST00000428445 RNASE8Q8TDE3 154 aaKnown RBP11.49□□□□□ -0.57
VARS-216ENST00000428445 RPUSD4Q96CM3 377 aaKnown RBP11.49□□□□□ -0.57
VARS-216ENST00000428445 SRRQ9GZT4 340 aa11.49□□□□□ -0.57
VARS-216ENST00000428445 ARL6Q9H0F7 186 aa11.49□□□□□ -0.57
VARS-216ENST00000428445 ARV1Q9H2C2 271 aa11.49□□□□□ -0.57
VARS-216ENST00000428445 SCRT2Q9NQ03 307 aa11.49□□□□□ -0.57
VARS-216ENST00000428445 TRAV26-1A0A087WT03 109 aa11.48□□□□□ -0.57
VARS-216ENST00000428445 PRAC2D3DTV9 90 aa11.48□□□□□ -0.57
VARS-216ENST00000428445 J3KRW8 73 aa11.48□□□□□ -0.57
VARS-216ENST00000428445 GOSR2O14653 212 aa11.48□□□□□ -0.57
VARS-216ENST00000428445 MRPS12O15235 138 aaKnown RBP11.48□□□□□ -0.57
VARS-216ENST00000428445 SSSCA1O60232 199 aa11.48□□□□□ -0.57
VARS-216ENST00000428445 HOXA5P20719 270 aa11.48□□□□□ -0.57
VARS-216ENST00000428445 SLC38A11Q08AI6 406 aa11.48□□□□□ -0.57
VARS-216ENST00000428445 LCN15Q6UWW0 184 aa11.48□□□□□ -0.57
VARS-216ENST00000428445 BPIFA4PQ86YQ2 179 aa11.48□□□□□ -0.57
VARS-216ENST00000428445 SLC50A1Q9BRV3 221 aa11.48□□□□□ -0.57
VARS-216ENST00000428445 GAGE12BA1L429 117 aa11.47□□□□□ -0.57
VARS-216ENST00000428445 CCDC160A6NGH7 325 aa11.47□□□□□ -0.57
VARS-216ENST00000428445 H7BYZ3 331 aa11.47□□□□□ -0.57
VARS-216ENST00000428445 GAGE7O76087 117 aa11.47□□□□□ -0.57
VARS-216ENST00000428445 METTL15P1P0C7V9 234 aa11.47□□□□□ -0.57
VARS-216ENST00000428445 GAGE12FP0CL80 117 aa11.47□□□□□ -0.57
VARS-216ENST00000428445 GAGE12GP0CL81 117 aa11.47□□□□□ -0.57
VARS-216ENST00000428445 GAGE12IP0CL82 117 aa11.47□□□□□ -0.57
VARS-216ENST00000428445 ESRGQ1W209 222 aa11.47□□□□□ -0.57
VARS-216ENST00000428445 TRIQKQ629K1 86 aa11.47□□□□□ -0.57
VARS-216ENST00000428445 ZNF546Q86UE3 836 aa11.47□□□□□ -0.57
VARS-216ENST00000428445 Q8N1X5 172 aa11.47□□□□□ -0.57
VARS-216ENST00000428445 GNPNAT1Q96EK6 184 aaPredicted RBP11.47□□□□□ -0.57
VARS-216ENST00000428445 ZNF331Q9NQX6 463 aaPredicted RBP11.47□□□□□ -0.57
VARS-216ENST00000428445 FUSP35637 526 aaKnown RBP eCLIP11.46□□□□□ -0.57
VARS-216ENST00000428445 BAK1Q16611 211 aa11.46□□□□□ -0.57
VARS-216ENST00000428445 IAH1Q2TAA2 248 aaPredicted RBP11.46□□□□□ -0.57
VARS-216ENST00000428445 MORN5Q5VZ52 161 aa11.46□□□□□ -0.57
VARS-216ENST00000428445 LINC00305Q7Z4B0 112 aa11.46□□□□□ -0.57
VARS-216ENST00000428445 OR10J6PQ8NGY7 276 aa11.46□□□□□ -0.57
VARS-216ENST00000428445 TMEM263Q8WUH6 116 aaKnown RBP11.46□□□□□ -0.57
VARS-216ENST00000428445 FLVCR2Q9UPI3 526 aa11.46□□□□□ -0.57
VARS-216ENST00000428445 SLC17A3O00476 420 aa11.45□□□□□ -0.58
VARS-216ENST00000428445 ARL16Q0P5N6 197 aa11.45□□□□□ -0.58
VARS-216ENST00000428445 ZBTB8BQ8NAP8 495 aaPredicted RBP11.45□□□□□ -0.58
VARS-216ENST00000428445 MITD1Q8WV92 249 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms