RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 MGAT4CQ9UBM8 478 aa11.34□□□□□ -0.59
HLA-DQB2-230ENST00000427449 H0YIZ8 118 aa11.33□□□□□ -0.6
HLA-DQB2-230ENST00000427449 H3BQ15 152 aa11.33□□□□□ -0.6
HLA-DQB2-230ENST00000427449 RAP2BP61225 183 aa11.33□□□□□ -0.6
HLA-DQB2-230ENST00000427449 PXDC1Q5TGL8 231 aa11.33□□□□□ -0.6
HLA-DQB2-230ENST00000427449 MIC13Q5XKP0 118 aa11.33□□□□□ -0.6
HLA-DQB2-230ENST00000427449 EBLN2Q6P2I7 272 aa11.33□□□□□ -0.6
HLA-DQB2-230ENST00000427449 LINC00305Q7Z4B0 112 aa11.33□□□□□ -0.6
HLA-DQB2-230ENST00000427449 TMEM252Q8N6L7 170 aa11.33□□□□□ -0.6
HLA-DQB2-230ENST00000427449 CHAC2Q8WUX2 184 aa11.33□□□□□ -0.6
HLA-DQB2-230ENST00000427449 PTTG2Q9NZH5 202 aa11.33□□□□□ -0.6
HLA-DQB2-230ENST00000427449 RFNGQ9Y644 331 aa11.33□□□□□ -0.6
HLA-DQB2-230ENST00000427449 HERC2O95714 4834 aa11.32□□□□□ -0.6
HLA-DQB2-230ENST00000427449 DEFB131BA0A096LNP1 70 aa11.32□□□□□ -0.6
HLA-DQB2-230ENST00000427449 FAM240BA0A1B0GVZ2 78 aa11.32□□□□□ -0.6
HLA-DQB2-230ENST00000427449 PRAC2D3DTV9 90 aa11.32□□□□□ -0.6
HLA-DQB2-230ENST00000427449 CXCL2P19875 107 aa11.32□□□□□ -0.6
HLA-DQB2-230ENST00000427449 KIR3DS1Q14943 382 aa11.32□□□□□ -0.6
HLA-DQB2-230ENST00000427449 PSG3Q16557 428 aa11.32□□□□□ -0.6
HLA-DQB2-230ENST00000427449 FAM222AQ5U5X8 452 aa11.32□□□□□ -0.6
HLA-DQB2-230ENST00000427449 NRARPQ7Z6K4 114 aa11.32□□□□□ -0.6
HLA-DQB2-230ENST00000427449 OR8A1Q8NGG7 326 aa11.32□□□□□ -0.6
HLA-DQB2-230ENST00000427449 S100ZQ8WXG8 99 aa11.32□□□□□ -0.6
HLA-DQB2-230ENST00000427449 IGHV3OR16-12A0A075B7B8 117 aa11.31□□□□□ -0.6
HLA-DQB2-230ENST00000427449 LOC102723971A0A1B0GUV8 181 aa11.31□□□□□ -0.6
HLA-DQB2-230ENST00000427449 C5orf51A6NDU8 294 aa11.31□□□□□ -0.6
HLA-DQB2-230ENST00000427449 FAM25EA8MYX2 175 aa11.31□□□□□ -0.6
HLA-DQB2-230ENST00000427449 BOLA2-SMG1P6H3BVE0 249 aa11.31□□□□□ -0.6
HLA-DQB2-230ENST00000427449 SNRPCP09234 159 aaKnown RBP11.31□□□□□ -0.6
HLA-DQB2-230ENST00000427449 SULT1A1P50225 295 aa11.31□□□□□ -0.6
HLA-DQB2-230ENST00000427449 YTHDF2Q9Y5A9 579 aaKnown RBP11.31□□□□□ -0.6
HLA-DQB2-230ENST00000427449 TRAV12-2A0A075B6T6 113 aa11.3□□□□□ -0.6
HLA-DQB2-230ENST00000427449 TRAV5A0A0B4J249 113 aa11.3□□□□□ -0.6
HLA-DQB2-230ENST00000427449 UBE2L5PA0A1B0GUS4 154 aa11.3□□□□□ -0.6
HLA-DQB2-230ENST00000427449 TMEM189A5PLL7 270 aa11.3□□□□□ -0.6
HLA-DQB2-230ENST00000427449 H3BTX0 84 aa11.3□□□□□ -0.6
HLA-DQB2-230ENST00000427449 SIX6O95475 246 aa11.3□□□□□ -0.6
HLA-DQB2-230ENST00000427449 AZU1P20160 251 aa11.3□□□□□ -0.6
HLA-DQB2-230ENST00000427449 CAMLGP49069 296 aa11.3□□□□□ -0.6
HLA-DQB2-230ENST00000427449 CAV2P51636 162 aa11.3□□□□□ -0.6
HLA-DQB2-230ENST00000427449 OXA1LQ15070 435 aa11.3□□□□□ -0.6
HLA-DQB2-230ENST00000427449 ZNF738Q8NE65 137 aa11.3□□□□□ -0.6
HLA-DQB2-230ENST00000427449 UQCC1Q9NVA1 299 aa11.3□□□□□ -0.6
HLA-DQB2-230ENST00000427449 OR5AC2Q9NZP5 309 aa11.3□□□□□ -0.6
HLA-DQB2-230ENST00000427449 GOSR2O14653 212 aa11.29□□□□□ -0.6
HLA-DQB2-230ENST00000427449 DUSP14O95147 198 aaKnown RBP11.29□□□□□ -0.6
HLA-DQB2-230ENST00000427449 SPART-AS1P0CW21 52 aa11.29□□□□□ -0.6
HLA-DQB2-230ENST00000427449 TSPOP30536 169 aa11.29□□□□□ -0.6
HLA-DQB2-230ENST00000427449 RPL29P47914 159 aaKnown RBP11.29□□□□□ -0.6
HLA-DQB2-230ENST00000427449 H2BFSP57053 126 aa11.29□□□□□ -0.6
HLA-DQB2-230ENST00000427449 FGL1Q08830 312 aa11.29□□□□□ -0.6
HLA-DQB2-230ENST00000427449 ZNF846Q147U1 533 aa11.29□□□□□ -0.6
HLA-DQB2-230ENST00000427449 LCN15Q6UWW0 184 aa11.29□□□□□ -0.6
HLA-DQB2-230ENST00000427449 PARD6GQ9BYG4 376 aaPredicted RBP11.29□□□□□ -0.6
HLA-DQB2-230ENST00000427449 ZNF586Q9NXT0 402 aa11.29□□□□□ -0.6
HLA-DQB2-230ENST00000427449 GOLT1BQ9Y3E0 138 aa11.29□□□□□ -0.6
HLA-DQB2-230ENST00000427449 DYNC1H1Q14204 4646 aaKnown RBP11.29□□□□□ -0.6
HLA-DQB2-230ENST00000427449 ZNF705GA8MUZ8 300 aaPredicted RBP11.28□□□□□ -0.6
HLA-DQB2-230ENST00000427449 L7N2F9 121 aa11.28□□□□□ -0.6
HLA-DQB2-230ENST00000427449 NDUFB4O95168 129 aa11.28□□□□□ -0.6
HLA-DQB2-230ENST00000427449 EMP1P54849 157 aa11.28□□□□□ -0.6
HLA-DQB2-230ENST00000427449 S100A10P60903 97 aa11.28□□□□□ -0.6
HLA-DQB2-230ENST00000427449 VAMP2P63027 116 aa11.28□□□□□ -0.6
HLA-DQB2-230ENST00000427449 GCSAMLQ5JQS6 135 aa11.28□□□□□ -0.6
HLA-DQB2-230ENST00000427449 RPUSD4Q96CM3 377 aaKnown RBP11.28□□□□□ -0.6
HLA-DQB2-230ENST00000427449 MARVELD1Q9BSK0 173 aa11.28□□□□□ -0.6
HLA-DQB2-230ENST00000427449 SLC39A9Q9NUM3 307 aa11.28□□□□□ -0.6
HLA-DQB2-230ENST00000427449 COX7A2P2O60397 106 aa11.27□□□□□ -0.61
HLA-DQB2-230ENST00000427449 INSP01308 110 aa11.27□□□□□ -0.61
HLA-DQB2-230ENST00000427449 HBE1P02100 147 aa11.27□□□□□ -0.61
HLA-DQB2-230ENST00000427449 HIST1H1AQ02539 215 aaPredicted RBP11.27□□□□□ -0.61
HLA-DQB2-230ENST00000427449 NHLH2Q02577 135 aa11.27□□□□□ -0.61
HLA-DQB2-230ENST00000427449 C10orf113Q5VZT2 155 aa11.27□□□□□ -0.61
HLA-DQB2-230ENST00000427449 MZT2BQ6NZ67 158 aa11.27□□□□□ -0.61
HLA-DQB2-230ENST00000427449 FAM167A-AS1Q96KT0 104 aa11.27□□□□□ -0.61
HLA-DQB2-230ENST00000427449 SLC50A1Q9BRV3 221 aa11.27□□□□□ -0.61
HLA-DQB2-230ENST00000427449 NIPSNAP3BQ9BS92 247 aa11.27□□□□□ -0.61
HLA-DQB2-230ENST00000427449 DNAH11Q96DT5 4516 aa11.27□□□□□ -0.61
HLA-DQB2-230ENST00000427449 S100A7P31151 101 aa11.26□□□□□ -0.61
HLA-DQB2-230ENST00000427449 BCAP31P51572 246 aa11.26□□□□□ -0.61
HLA-DQB2-230ENST00000427449 RRN3P1Q2M238 152 aa11.26□□□□□ -0.61
HLA-DQB2-230ENST00000427449 BPIFA4PQ86YQ2 179 aa11.26□□□□□ -0.61
HLA-DQB2-230ENST00000427449 RNASE8Q8TDE3 154 aaKnown RBP11.26□□□□□ -0.61
HLA-DQB2-230ENST00000427449 NPCDR1Q9BY65 106 aa11.26□□□□□ -0.61
HLA-DQB2-230ENST00000427449 NMES1Q9C002 83 aa11.26□□□□□ -0.61
HLA-DQB2-230ENST00000427449 DNAJC4Q9NNZ3 241 aa11.26□□□□□ -0.61
HLA-DQB2-230ENST00000427449 PXMP4Q9Y6I8 212 aa11.26□□□□□ -0.61
HLA-DQB2-230ENST00000427449 KIAA1109Q2LD37 5005 aa11.26□□□□□ -0.61
HLA-DQB2-230ENST00000427449 NPIPB6E9PJ23 425 aa11.25□□□□□ -0.61
HLA-DQB2-230ENST00000427449 S100A11P31949 105 aa11.25□□□□□ -0.61
HLA-DQB2-230ENST00000427449 B2MP61769 119 aa11.25□□□□□ -0.61
HLA-DQB2-230ENST00000427449 FAM19A4Q96LR4 140 aa11.25□□□□□ -0.61
HLA-DQB2-230ENST00000427449 TEX48A0A1B0GUV7 120 aa11.24□□□□□ -0.61
HLA-DQB2-230ENST00000427449 A0A1B0GVY2 172 aa11.24□□□□□ -0.61
HLA-DQB2-230ENST00000427449 ZNF253O75346 499 aa11.24□□□□□ -0.61
HLA-DQB2-230ENST00000427449 FGF7P21781 194 aa11.24□□□□□ -0.61
HLA-DQB2-230ENST00000427449 GFI1BQ5VTD9 330 aa11.24□□□□□ -0.61
HLA-DQB2-230ENST00000427449 LINC00612Q8N6U2 182 aa11.24□□□□□ -0.61
HLA-DQB2-230ENST00000427449 ENKURQ8TC29 256 aa11.24□□□□□ -0.61
HLA-DQB2-230ENST00000427449 SLC25A2Q9BXI2 301 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms