RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 VMO1Q7Z5L0 202 aa11.84□□□□□ -0.51
PTPN13-203ENST00000427191 LYL1P12980 280 aa11.84□□□□□ -0.51
PTPN13-203ENST00000427191 C9orf118A6NHY6 69 aa11.84□□□□□ -0.51
PTPN13-203ENST00000427191 NCR2O95944 276 aa11.84□□□□□ -0.51
PTPN13-203ENST00000427191 EFNA4P52798 201 aa11.84□□□□□ -0.51
PTPN13-203ENST00000427191 TRBV25-1A0A075B6N4 114 aa11.83□□□□□ -0.52
PTPN13-203ENST00000427191 FOXL2P58012 376 aa11.83□□□□□ -0.52
PTPN13-203ENST00000427191 NCOR1O75376 2440 aa11.83□□□□□ -0.52
PTPN13-203ENST00000427191 TIAF1O95411 115 aa11.83□□□□□ -0.52
PTPN13-203ENST00000427191 PPIFP30405 207 aaKnown RBP11.83□□□□□ -0.52
PTPN13-203ENST00000427191 C9orf106Q8NAJ2 232 aa11.83□□□□□ -0.52
PTPN13-203ENST00000427191 K7EMI3 77 aa11.83□□□□□ -0.52
PTPN13-203ENST00000427191 IGKV1D-43A0A0B4J1Z2 117 aa11.83□□□□□ -0.52
PTPN13-203ENST00000427191 TRAV40A0A0B4J280 105 aa11.83□□□□□ -0.52
PTPN13-203ENST00000427191 B4DSR2 109 aa11.83□□□□□ -0.52
PTPN13-203ENST00000427191 H0YIZ8 118 aa11.83□□□□□ -0.52
PTPN13-203ENST00000427191 SCRT1Q9BWW7 348 aa11.83□□□□□ -0.52
PTPN13-203ENST00000427191 hDV102S1A0JD36 115 aa11.83□□□□□ -0.52
PTPN13-203ENST00000427191 IGHG3P01860 377 aa11.83□□□□□ -0.52
PTPN13-203ENST00000427191 EREGO14944 169 aa11.82□□□□□ -0.52
PTPN13-203ENST00000427191 RPL15P61313 204 aaKnown RBP11.82□□□□□ -0.52
PTPN13-203ENST00000427191 Q86TA4 180 aa11.82□□□□□ -0.52
PTPN13-203ENST00000427191 PRSS46E5RG02 174 aa11.82□□□□□ -0.52
PTPN13-203ENST00000427191 IGKV1-9A0A0C4DH69 117 aa11.82□□□□□ -0.52
PTPN13-203ENST00000427191 PCNX1Q96RV3 2341 aa11.82□□□□□ -0.52
PTPN13-203ENST00000427191 H0YJW9 148 aa11.82□□□□□ -0.52
PTPN13-203ENST00000427191 CELA3AP09093 270 aa11.82□□□□□ -0.52
PTPN13-203ENST00000427191 GAGE1Q13065 139 aa11.82□□□□□ -0.52
PTPN13-203ENST00000427191 FAM201AQ5SY85 155 aa11.82□□□□□ -0.52
PTPN13-203ENST00000427191 NDUFS6O75380 124 aaKnown RBP11.81□□□□□ -0.52
PTPN13-203ENST00000427191 ACYP1P07311 99 aa11.81□□□□□ -0.52
PTPN13-203ENST00000427191 SLAQ13239 276 aa11.81□□□□□ -0.52
PTPN13-203ENST00000427191 IGHV1-18A0A0C4DH31 117 aa11.81□□□□□ -0.52
PTPN13-203ENST00000427191 ZNF329Q86UD4 541 aa11.81□□□□□ -0.52
PTPN13-203ENST00000427191 LYZL4Q96KX0 146 aa11.81□□□□□ -0.52
PTPN13-203ENST00000427191 GLRX5Q86SX6 157 aa11.81□□□□□ -0.52
PTPN13-203ENST00000427191 CRYGSP22914 178 aa11.81□□□□□ -0.52
PTPN13-203ENST00000427191 CACNA1EQ15878 2313 aa11.81□□□□□ -0.52
PTPN13-203ENST00000427191 ZNF474Q6S9Z5 364 aaPredicted RBP11.81□□□□□ -0.52
PTPN13-203ENST00000427191 C14orf178Q8N769 122 aaPredicted RBP11.81□□□□□ -0.52
PTPN13-203ENST00000427191 SPXQ9BT56 116 aa11.81□□□□□ -0.52
PTPN13-203ENST00000427191 IGHV1-46P01743 117 aa11.81□□□□□ -0.52
PTPN13-203ENST00000427191 HLA-DMBP28068 263 aa11.81□□□□□ -0.52
PTPN13-203ENST00000427191 RPP25LQ8N5L8 163 aaKnown RBP11.81□□□□□ -0.52
PTPN13-203ENST00000427191 ZNF114Q8NC26 417 aa11.81□□□□□ -0.52
PTPN13-203ENST00000427191 MRAPQ8TCY5 172 aa11.8□□□□□ -0.52
PTPN13-203ENST00000427191 CACNA1GO43497 2377 aa11.8□□□□□ -0.52
PTPN13-203ENST00000427191 PKDREJQ9NTG1 2253 aa11.8□□□□□ -0.52
PTPN13-203ENST00000427191 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.8□□□□□ -0.52
PTPN13-203ENST00000427191 SIVA1O15304 175 aa11.8□□□□□ -0.52
PTPN13-203ENST00000427191 Q8N8P6 123 aa11.8□□□□□ -0.52
PTPN13-203ENST00000427191 EGR2P11161 476 aaPredicted RBP11.8□□□□□ -0.52
PTPN13-203ENST00000427191 SHANK2-AS3Q9BTD1 123 aa11.8□□□□□ -0.52
PTPN13-203ENST00000427191 TMEM178BH3BS89 294 aa11.79□□□□□ -0.52
PTPN13-203ENST00000427191 BUB1B-PAK6H3BSN5 160 aa11.79□□□□□ -0.52
PTPN13-203ENST00000427191 TMEM200BQ69YZ2 307 aa11.79□□□□□ -0.52
PTPN13-203ENST00000427191 NDUFC2O95298 119 aa11.79□□□□□ -0.52
PTPN13-203ENST00000427191 PFN1P07737 140 aaKnown RBP11.79□□□□□ -0.52
PTPN13-203ENST00000427191 CD33P20138 364 aa11.79□□□□□ -0.52
PTPN13-203ENST00000427191 ATP1A1-AS1Q5TC04 95 aa11.79□□□□□ -0.52
PTPN13-203ENST00000427191 MGAMO43451 1857 aa11.79□□□□□ -0.52
PTPN13-203ENST00000427191 PAQR4Q8N4S7 273 aaPredicted RBP11.79□□□□□ -0.52
PTPN13-203ENST00000427191 STPG4Q8N801 248 aa11.79□□□□□ -0.52
PTPN13-203ENST00000427191 THAP8Q8NA92 274 aa11.79□□□□□ -0.52
PTPN13-203ENST00000427191 TRAV13-1A0A0B4J241 112 aa11.79□□□□□ -0.52
PTPN13-203ENST00000427191 A8MWP6 167 aa11.79□□□□□ -0.52
PTPN13-203ENST00000427191 POU2AF1Q16633 256 aa11.79□□□□□ -0.52
PTPN13-203ENST00000427191 EPOPA6NHQ4 379 aa11.78□□□□□ -0.52
PTPN13-203ENST00000427191 NSUN5P1Q3KNT7 163 aa11.78□□□□□ -0.52
PTPN13-203ENST00000427191 A0A0A6YYD4 124 aa11.78□□□□□ -0.52
PTPN13-203ENST00000427191 NABP1Q96AH0 204 aa11.78□□□□□ -0.52
PTPN13-203ENST00000427191 CYTL1Q9NRR1 136 aa11.78□□□□□ -0.52
PTPN13-203ENST00000427191 DYSFO75923 2080 aa11.78□□□□□ -0.52
PTPN13-203ENST00000427191 CSRP1P21291 193 aaKnown RBP11.78□□□□□ -0.52
PTPN13-203ENST00000427191 SIGLEC9Q9Y336 463 aa11.78□□□□□ -0.52
PTPN13-203ENST00000427191 ATP6V0BQ99437 205 aa11.77□□□□□ -0.52
PTPN13-203ENST00000427191 HERVK_113P63121 156 aa11.77□□□□□ -0.53
PTPN13-203ENST00000427191 PRO1854Q9UHT4 67 aa11.77□□□□□ -0.53
PTPN13-203ENST00000427191 K7EP34 96 aa11.77□□□□□ -0.53
PTPN13-203ENST00000427191 FCN3O75636 299 aa11.77□□□□□ -0.53
PTPN13-203ENST00000427191 VSIRQ9H7M9 311 aa11.77□□□□□ -0.53
PTPN13-203ENST00000427191 PLXNA3P51805 1871 aa11.77□□□□□ -0.53
PTPN13-203ENST00000427191 DENND4AQ7Z401 1863 aa11.77□□□□□ -0.53
PTPN13-203ENST00000427191 HGFACQ04756 655 aa11.77□□□□□ -0.53
PTPN13-203ENST00000427191 TNS1Q9HBL0 1735 aaKnown RBP11.77□□□□□ -0.53
PTPN13-203ENST00000427191 IGHV3-73A0A0B4J1V6 119 aa11.76□□□□□ -0.53
PTPN13-203ENST00000427191 MAJINQ3KP22 176 aa11.76□□□□□ -0.53
PTPN13-203ENST00000427191 SIP14410 1827 aa11.76□□□□□ -0.53
PTPN13-203ENST00000427191 CDKN1AP38936 164 aa11.76□□□□□ -0.53
PTPN13-203ENST00000427191 C3orf36Q3SXR2 165 aa11.76□□□□□ -0.53
PTPN13-203ENST00000427191 PIP4P2Q8N4L2 257 aa11.76□□□□□ -0.53
PTPN13-203ENST00000427191 BVES-AS1Q5T3Y7 98 aa11.76□□□□□ -0.53
PTPN13-203ENST00000427191 ZNF625Q96I27 306 aaPredicted RBP11.76□□□□□ -0.53
PTPN13-203ENST00000427191 TP53TG1Q9Y2A0 90 aa11.76□□□□□ -0.53
PTPN13-203ENST00000427191 SLC25A16P16260 332 aa11.76□□□□□ -0.53
PTPN13-203ENST00000427191 DMRTC2Q8IXT2 367 aaPredicted RBP11.76□□□□□ -0.53
PTPN13-203ENST00000427191 TMEM256Q8N2U0 113 aa11.76□□□□□ -0.53
PTPN13-203ENST00000427191 ZNF672Q499Z4 452 aaPredicted RBP11.76□□□□□ -0.53
PTPN13-203ENST00000427191 PYY3Q5JQD4 70 aa11.76□□□□□ -0.53
PTPN13-203ENST00000427191 APOC4P55056 127 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms