RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 EDN2P20800 178 aa13.3□□□□□ -0.28
FN1-208ENST00000426059 C18orf65Q6ZTR6 163 aa13.3□□□□□ -0.28
FN1-208ENST00000426059 KLHDC1Q8N7A1 406 aa13.3□□□□□ -0.28
FN1-208ENST00000426059 C5orf17Q8NAS9 161 aa13.3□□□□□ -0.28
FN1-208ENST00000426059 OTORQ9NRC9 128 aa13.3□□□□□ -0.28
FN1-208ENST00000426059 NDUFA4O00483 81 aa13.3□□□□□ -0.28
FN1-208ENST00000426059 GGCTO75223 188 aaKnown RBP13.3□□□□□ -0.28
FN1-208ENST00000426059 CNN1P51911 297 aaKnown RBP13.3□□□□□ -0.28
FN1-208ENST00000426059 ZFP82Q8N141 532 aa13.3□□□□□ -0.28
FN1-208ENST00000426059 IGF2BP2-AS1Q96M15 143 aa13.3□□□□□ -0.28
FN1-208ENST00000426059 ASCL2Q99929 193 aa13.3□□□□□ -0.28
FN1-208ENST00000426059 C9JCJ5 164 aa13.29□□□□□ -0.28
FN1-208ENST00000426059 MT-ND4LP03901 98 aa13.29□□□□□ -0.28
FN1-208ENST00000426059 TCRAP04437 139 aa13.29□□□□□ -0.28
FN1-208ENST00000426059 HLA-DMBP28068 263 aa13.29□□□□□ -0.28
FN1-208ENST00000426059 FOXE3Q13461 319 aa13.29□□□□□ -0.28
FN1-208ENST00000426059 HIST1H2BAQ96A08 127 aa13.29□□□□□ -0.28
FN1-208ENST00000426059 IGLV2-8P01709 118 aa13.29□□□□□ -0.28
FN1-208ENST00000426059 TM4SF20Q53R12 229 aa13.29□□□□□ -0.28
FN1-208ENST00000426059 GOLT1AQ6ZVE7 132 aa13.29□□□□□ -0.28
FN1-208ENST00000426059 LURAP1LQ8IV03 231 aa13.29□□□□□ -0.28
FN1-208ENST00000426059 CMTM2Q8TAZ6 248 aa13.29□□□□□ -0.28
FN1-208ENST00000426059 ATG101Q9BSB4 218 aa13.29□□□□□ -0.28
FN1-208ENST00000426059 ZNF785A8K8V0 405 aa13.28□□□□□ -0.28
FN1-208ENST00000426059 ELANEP08246 267 aa13.28□□□□□ -0.28
FN1-208ENST00000426059 MGST1P10620 155 aaKnown RBP13.28□□□□□ -0.28
FN1-208ENST00000426059 TUBA4BQ9H853 241 aa13.28□□□□□ -0.28
FN1-208ENST00000426059 RNF24Q9Y225 148 aa13.28□□□□□ -0.28
FN1-208ENST00000426059 TMEM89A2RUT3 159 aa13.28□□□□□ -0.28
FN1-208ENST00000426059 CLDN34H7C241 214 aa13.28□□□□□ -0.28
FN1-208ENST00000426059 ELOBQ15370 118 aa13.28□□□□□ -0.28
FN1-208ENST00000426059 C15orf54Q8N8G6 183 aa13.28□□□□□ -0.28
FN1-208ENST00000426059 SFRP2Q96HF1 295 aa13.28□□□□□ -0.28
FN1-208ENST00000426059 YPEL4Q96NS1 127 aa13.28□□□□□ -0.28
FN1-208ENST00000426059 CDC42EP3Q9UKI2 254 aa13.28□□□□□ -0.28
FN1-208ENST00000426059 U3KQE9 123 aa13.28□□□□□ -0.28
FN1-208ENST00000426059 TGIF2-C20orf24A0A0A6YYL0 155 aa13.27□□□□□ -0.29
FN1-208ENST00000426059 H7BYZ3 331 aa13.27□□□□□ -0.29
FN1-208ENST00000426059 CXCL1P09341 107 aa13.27□□□□□ -0.29
FN1-208ENST00000426059 UBE2G1P62253 170 aa13.27□□□□□ -0.29
FN1-208ENST00000426059 FAM209BQ5JX69 171 aa13.27□□□□□ -0.29
FN1-208ENST00000426059 DEFB136Q30KP8 78 aa13.27□□□□□ -0.29
FN1-208ENST00000426059 TCTEX1D4Q5JR98 221 aa13.27□□□□□ -0.29
FN1-208ENST00000426059 BAGE2Q86Y30 109 aa13.27□□□□□ -0.29
FN1-208ENST00000426059 C11orf44Q8N8P7 122 aa13.27□□□□□ -0.29
FN1-208ENST00000426059 TMEM190Q8WZ59 177 aa13.27□□□□□ -0.29
FN1-208ENST00000426059 RNASE7Q9H1E1 156 aaKnown RBP13.27□□□□□ -0.29
FN1-208ENST00000426059 INAFM1C9JVW0 142 aa13.26□□□□□ -0.29
FN1-208ENST00000426059 SRSF2Q01130 221 aaKnown RBP13.26□□□□□ -0.29
FN1-208ENST00000426059 TMEM183BQ1AE95 376 aa13.26□□□□□ -0.29
FN1-208ENST00000426059 KHDC1LQ5JSQ8 128 aa13.26□□□□□ -0.29
FN1-208ENST00000426059 MYOZ3Q8TDC0 251 aa13.26□□□□□ -0.29
FN1-208ENST00000426059 TMEM160Q9NX00 188 aa13.26□□□□□ -0.29
FN1-208ENST00000426059 NSD1Q96L73 2696 aaPredicted RBP13.26□□□□□ -0.29
FN1-208ENST00000426059 IGHV4OR15-8A0A075B7B6 117 aa13.25□□□□□ -0.29
FN1-208ENST00000426059 A0A087WW49 117 aa13.25□□□□□ -0.29
FN1-208ENST00000426059 ZNF705FA8MVS1 300 aaPredicted RBP13.25□□□□□ -0.29
FN1-208ENST00000426059 TAS2R60P59551 318 aa13.25□□□□□ -0.29
FN1-208ENST00000426059 PDE6HQ13956 83 aa13.25□□□□□ -0.29
FN1-208ENST00000426059 RPEL1Q2QD12 228 aa13.25□□□□□ -0.29
FN1-208ENST00000426059 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.25□□□□□ -0.29
FN1-208ENST00000426059 RNF182Q8N6D2 247 aa13.25□□□□□ -0.29
FN1-208ENST00000426059 CTDSP1Q9GZU7 261 aa13.25□□□□□ -0.29
FN1-208ENST00000426059 AAMDCQ9H7C9 122 aa13.25□□□□□ -0.29
FN1-208ENST00000426059 TMEM242Q9NWH2 141 aa13.25□□□□□ -0.29
FN1-208ENST00000426059 S100A7P31151 101 aa13.25□□□□□ -0.29
FN1-208ENST00000426059 GALR1P47211 349 aa13.25□□□□□ -0.29
FN1-208ENST00000426059 LYPD1Q8N2G4 141 aa13.25□□□□□ -0.29
FN1-208ENST00000426059 UBE2E2Q96LR5 201 aa13.25□□□□□ -0.29
FN1-208ENST00000426059 SETXQ7Z333 2677 aaKnown RBP13.24□□□□□ -0.29
FN1-208ENST00000426059 LGALS1P09382 135 aaKnown RBP13.24□□□□□ -0.29
FN1-208ENST00000426059 ERVFC1-1P60608 527 aa13.24□□□□□ -0.29
FN1-208ENST00000426059 RAB5BP61020 215 aa13.24□□□□□ -0.29
FN1-208ENST00000426059 SNRPEP62304 92 aaKnown RBP13.24□□□□□ -0.29
FN1-208ENST00000426059 PRR27Q6MZM9 219 aa13.24□□□□□ -0.29
FN1-208ENST00000426059 C16orf54Q6UWD8 224 aa13.24□□□□□ -0.29
FN1-208ENST00000426059 ZNF418Q8TF45 676 aaPredicted RBP13.24□□□□□ -0.29
FN1-208ENST00000426059 DUX3Q96PT4 197 aa13.24□□□□□ -0.29
FN1-208ENST00000426059 TCEAL7Q9BRU2 100 aa13.24□□□□□ -0.29
FN1-208ENST00000426059 KLF12Q9Y4X4 402 aa13.24□□□□□ -0.29
FN1-208ENST00000426059 IGKV3-7A0A075B6H7 116 aa13.24□□□□□ -0.29
FN1-208ENST00000426059 CD99P14209 185 aa13.24□□□□□ -0.29
FN1-208ENST00000426059 LINC00469Q8N7U9 141 aa13.24□□□□□ -0.29
FN1-208ENST00000426059 RNF152Q8N8N0 203 aa13.24□□□□□ -0.29
FN1-208ENST00000426059 ANAPC16Q96DE5 110 aa13.24□□□□□ -0.29
FN1-208ENST00000426059 ZNF331Q9NQX6 463 aaPredicted RBP13.24□□□□□ -0.29
FN1-208ENST00000426059 LY96Q9Y6Y9 160 aa13.24□□□□□ -0.29
FN1-208ENST00000426059 CXorf65A6NEN9 183 aa13.23□□□□□ -0.29
FN1-208ENST00000426059 LINC00587B1AMM8 73 aa13.23□□□□□ -0.29
FN1-208ENST00000426059 DIRC3C9JPN6 131 aa13.23□□□□□ -0.29
FN1-208ENST00000426059 IGLV2-11P01706 119 aa13.23□□□□□ -0.29
FN1-208ENST00000426059 RNASE1P07998 156 aaKnown RBP13.23□□□□□ -0.29
FN1-208ENST00000426059 FAM3BP58499 235 aaPredicted RBP13.23□□□□□ -0.29
FN1-208ENST00000426059 PSG9Q00887 426 aa13.23□□□□□ -0.29
FN1-208ENST00000426059 C1orf194Q5T5A4 169 aa13.23□□□□□ -0.29
FN1-208ENST00000426059 PRNTQ86SH4 94 aa13.23□□□□□ -0.29
FN1-208ENST00000426059 OR10G8Q8NGN5 311 aa13.23□□□□□ -0.29
FN1-208ENST00000426059 GLMPQ8WWB7 406 aa13.23□□□□□ -0.29
FN1-208ENST00000426059 FN1P02751 2386 aaKnown RBP13.23□□□□□ -0.29
FN1-208ENST00000426059 SMIM6P0DI80 62 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms