RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 TCF24Q7RTU0 167 aa10.38□□□□□ -0.75
COL12A1-205ENST00000425443 ZNF329Q86UD4 541 aa10.38□□□□□ -0.75
COL12A1-205ENST00000425443 C18orf32Q8TCD1 76 aa10.38□□□□□ -0.75
COL12A1-205ENST00000425443 RNF183Q96D59 192 aa10.38□□□□□ -0.75
COL12A1-205ENST00000425443 CLEC7AQ9BXN2 247 aa10.38□□□□□ -0.75
COL12A1-205ENST00000425443 ZNF331Q9NQX6 463 aaPredicted RBP10.38□□□□□ -0.75
COL12A1-205ENST00000425443 TCRBV4S1A1TA0A5B7 111 aa10.38□□□□□ -0.75
COL12A1-205ENST00000425443 DLX6P56179 175 aa10.38□□□□□ -0.75
COL12A1-205ENST00000425443 SPATA12Q7Z6I5 190 aa10.38□□□□□ -0.75
COL12A1-205ENST00000425443 PNKDQ8N490 385 aa10.38□□□□□ -0.75
COL12A1-205ENST00000425443 MBD6Q96DN6 1003 aa10.38□□□□□ -0.75
COL12A1-205ENST00000425443 SPTBN4Q9H254 2564 aa10.37□□□□□ -0.75
COL12A1-205ENST00000425443 APCSP02743 223 aa10.37□□□□□ -0.75
COL12A1-205ENST00000425443 TNFRSF19Q9NS68 423 aa10.37□□□□□ -0.75
COL12A1-205ENST00000425443 IZUMO1RA6ND01 250 aa10.37□□□□□ -0.75
COL12A1-205ENST00000425443 UBE2G1P62253 170 aa10.37□□□□□ -0.75
COL12A1-205ENST00000425443 NUP35Q8NFH5 326 aa10.37□□□□□ -0.75
COL12A1-205ENST00000425443 S4R3C0 116 aa10.37□□□□□ -0.75
COL12A1-205ENST00000425443 A0A1W2PRD5 423 aa10.36□□□□□ -0.75
COL12A1-205ENST00000425443 A0A1W2PRF3 423 aa10.36□□□□□ -0.75
COL12A1-205ENST00000425443 A0A1W2PRM7 423 aa10.36□□□□□ -0.75
COL12A1-205ENST00000425443 PGPA6NDG6 321 aa10.36□□□□□ -0.75
COL12A1-205ENST00000425443 LY6HO94772 140 aa10.36□□□□□ -0.75
COL12A1-205ENST00000425443 MT-ND6P03923 174 aa10.36□□□□□ -0.75
COL12A1-205ENST00000425443 HSD52Q0P140 79 aa10.36□□□□□ -0.75
COL12A1-205ENST00000425443 Q56UQ5 140 aa10.36□□□□□ -0.75
COL12A1-205ENST00000425443 LINC00322Q6ZN03 302 aaPredicted RBP10.36□□□□□ -0.75
COL12A1-205ENST00000425443 PMCHL1Q16048 86 aa10.36□□□□□ -0.75
COL12A1-205ENST00000425443 MRGPRG-AS1Q2M3A8 158 aa10.36□□□□□ -0.75
COL12A1-205ENST00000425443 COX19Q49B96 90 aa10.36□□□□□ -0.75
COL12A1-205ENST00000425443 TEX45Q8NA69 505 aa10.36□□□□□ -0.75
COL12A1-205ENST00000425443 OR8B3Q8NGG8 313 aa10.36□□□□□ -0.75
COL12A1-205ENST00000425443 FXYD5Q96DB9 178 aa10.36□□□□□ -0.75
COL12A1-205ENST00000425443 OR8B2Q96RD0 313 aa10.36□□□□□ -0.75
COL12A1-205ENST00000425443 C7orf69Q9H7B7 122 aa10.36□□□□□ -0.75
COL12A1-205ENST00000425443 IGHV1-3A0A0C4DH29 117 aa10.36□□□□□ -0.75
COL12A1-205ENST00000425443 PEX7O00628 323 aa10.36□□□□□ -0.75
COL12A1-205ENST00000425443 IGLC1P0CG04 106 aa10.36□□□□□ -0.75
COL12A1-205ENST00000425443 ZNF137PP52743 207 aa10.36□□□□□ -0.75
COL12A1-205ENST00000425443 RAXQ9Y2V3 346 aa10.36□□□□□ -0.75
COL12A1-205ENST00000425443 MUC21A0A0G2JKD1 596 aa10.35□□□□□ -0.75
COL12A1-205ENST00000425443 MUC21A0A140T8X8 626 aa10.35□□□□□ -0.75
COL12A1-205ENST00000425443 GAGE12HA6NDE8 117 aa10.35□□□□□ -0.75
COL12A1-205ENST00000425443 INS-IGF2F8WCM5 200 aa10.35□□□□□ -0.75
COL12A1-205ENST00000425443 BUB1B-PAK6H3BSN5 160 aa10.35□□□□□ -0.75
COL12A1-205ENST00000425443 FOXA3P55318 350 aaPredicted RBP10.35□□□□□ -0.75
COL12A1-205ENST00000425443 ZNF672Q499Z4 452 aaPredicted RBP10.35□□□□□ -0.75
COL12A1-205ENST00000425443 MUC21Q5SSG8 566 aa10.35□□□□□ -0.75
COL12A1-205ENST00000425443 EBLN2Q6P2I7 272 aa10.35□□□□□ -0.75
COL12A1-205ENST00000425443 URB1-AS1Q96HZ7 61 aa10.35□□□□□ -0.75
COL12A1-205ENST00000425443 FBXL15Q9H469 300 aa10.35□□□□□ -0.75
COL12A1-205ENST00000425443 TRAV8-1A0A0A6YYK1 113 aa10.35□□□□□ -0.75
COL12A1-205ENST00000425443 HLA-DQA1P01909 254 aa10.35□□□□□ -0.75
COL12A1-205ENST00000425443 RNASEKQ6P5S7 137 aaKnown RBP10.35□□□□□ -0.75
COL12A1-205ENST00000425443 MRPL27Q9P0M9 148 aaKnown RBP10.35□□□□□ -0.75
COL12A1-205ENST00000425443 SH2D7A6NKC9 451 aaPredicted RBP10.34□□□□□ -0.75
COL12A1-205ENST00000425443 HIGD1CA8MV81 97 aa10.34□□□□□ -0.75
COL12A1-205ENST00000425443 NUDT3O95989 172 aa10.34□□□□□ -0.75
COL12A1-205ENST00000425443 CA7P43166 264 aa10.34□□□□□ -0.75
COL12A1-205ENST00000425443 LYZP61626 148 aa10.34□□□□□ -0.75
COL12A1-205ENST00000425443 ZNF562Q6V9R5 426 aa10.34□□□□□ -0.75
COL12A1-205ENST00000425443 PPP1R27Q86WC6 154 aa10.34□□□□□ -0.75
COL12A1-205ENST00000425443 PERPQ96FX8 193 aa10.34□□□□□ -0.75
COL12A1-205ENST00000425443 SIGLEC9Q9Y336 463 aa10.34□□□□□ -0.75
COL12A1-205ENST00000425443 TIMD4Q96H15 378 aa10.33□□□□□ -0.76
COL12A1-205ENST00000425443 MYCNOSP40205 109 aa10.33□□□□□ -0.76
COL12A1-205ENST00000425443 ANXA2RQ3ZCQ2 193 aa10.33□□□□□ -0.76
COL12A1-205ENST00000425443 MSRB2Q9Y3D2 182 aa10.33□□□□□ -0.76
COL12A1-205ENST00000425443 MRPS16Q9Y3D3 137 aaKnown RBP10.33□□□□□ -0.76
COL12A1-205ENST00000425443 HILPDAQ9Y5L2 63 aa10.33□□□□□ -0.76
COL12A1-205ENST00000425443 TEX48A0A1B0GUV7 120 aa10.33□□□□□ -0.76
COL12A1-205ENST00000425443 OR11H12B2RN74 326 aa10.33□□□□□ -0.76
COL12A1-205ENST00000425443 IGLV1-47P01700 117 aa10.33□□□□□ -0.76
COL12A1-205ENST00000425443 RBP4P02753 201 aa10.33□□□□□ -0.76
COL12A1-205ENST00000425443 KLHDC1Q8N7A1 406 aa10.33□□□□□ -0.76
COL12A1-205ENST00000425443 OR11H1Q8NG94 326 aa10.33□□□□□ -0.76
COL12A1-205ENST00000425443 OR11H2Q8NH07 326 aa10.33□□□□□ -0.76
COL12A1-205ENST00000425443 HSBP1O75506 76 aa10.32□□□□□ -0.76
COL12A1-205ENST00000425443 TCTEX1D4Q5JR98 221 aa10.32□□□□□ -0.76
COL12A1-205ENST00000425443 PIMREGQ9BSJ6 248 aa10.32□□□□□ -0.76
COL12A1-205ENST00000425443 UCNP55089 124 aa10.32□□□□□ -0.76
COL12A1-205ENST00000425443 KLRB1Q12918 225 aa10.32□□□□□ -0.76
COL12A1-205ENST00000425443 HES1Q14469 280 aa10.32□□□□□ -0.76
COL12A1-205ENST00000425443 THAP8Q8NA92 274 aa10.32□□□□□ -0.76
COL12A1-205ENST00000425443 BORCS7Q96B45 105 aa10.32□□□□□ -0.76
COL12A1-205ENST00000425443 PMCHL2Q9BQD1 86 aa10.32□□□□□ -0.76
COL12A1-205ENST00000425443 WIPF2Q8TF74 440 aaPredicted RBP10.31□□□□□ -0.76
COL12A1-205ENST00000425443 SRSF12Q8WXF0 261 aaKnown RBP10.31□□□□□ -0.76
COL12A1-205ENST00000425443 PGLYRP4Q96LB8 373 aa10.31□□□□□ -0.76
COL12A1-205ENST00000425443 TPPP3Q9BW30 176 aa10.31□□□□□ -0.76
COL12A1-205ENST00000425443 FAM181BA6NEQ2 426 aa10.31□□□□□ -0.76
COL12A1-205ENST00000425443 LINC00173Q6ZV60 143 aa10.31□□□□□ -0.76
COL12A1-205ENST00000425443 GRAMD2BQ96HH9 432 aa10.31□□□□□ -0.76
COL12A1-205ENST00000425443 FAM231DQ6ZW35 169 aa10.31□□□□□ -0.76
COL12A1-205ENST00000425443 EXOC3-AS1Q8N2X6 119 aa10.31□□□□□ -0.76
COL12A1-205ENST00000425443 GTSF1Q8WW33 167 aa10.31□□□□□ -0.76
COL12A1-205ENST00000425443 C2orf70A6NJV1 201 aa10.3□□□□□ -0.76
COL12A1-205ENST00000425443 HTR1DP28221 377 aa10.3□□□□□ -0.76
COL12A1-205ENST00000425443 KLF17Q5JT82 389 aaPredicted RBP10.3□□□□□ -0.76
COL12A1-205ENST00000425443 PPDPFQ9H3Y8 114 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms