RNA–Protein interactions for RNA: ENST00000425393.1

RAB3GAP1-202, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2 BASIC

Gene RAB3GAP1, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-202ENST00000425393 LSM5Q9Y4Y9 91 aaKnown RBP1.07□□□□□ -2.24
RAB3GAP1-202ENST00000425393 ZANQ9Y493 2812 aa1.07□□□□□ -2.24
RAB3GAP1-202ENST00000425393 CENPEQ02224 2701 aa1.07□□□□□ -2.24
RAB3GAP1-202ENST00000425393 TGP01266 2768 aa1.07□□□□□ -2.24
RAB3GAP1-202ENST00000425393 DIDO1Q9BTC0 2240 aaKnown RBP1.07□□□□□ -2.24
RAB3GAP1-202ENST00000425393 ATMQ13315 3056 aa1.06□□□□□ -2.24
RAB3GAP1-202ENST00000425393 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.06□□□□□ -2.24
RAB3GAP1-202ENST00000425393 E2F6O75461 281 aa1.06□□□□□ -2.24
RAB3GAP1-202ENST00000425393 IFNA5P01569 189 aa1.06□□□□□ -2.24
RAB3GAP1-202ENST00000425393 NKX2-5P52952 324 aaPredicted RBP1.06□□□□□ -2.24
RAB3GAP1-202ENST00000425393 IFITM2Q01629 132 aa1.06□□□□□ -2.24
RAB3GAP1-202ENST00000425393 STX5Q13190 355 aa1.06□□□□□ -2.24
RAB3GAP1-202ENST00000425393 SRSF6Q13247 344 aaKnown RBP1.06□□□□□ -2.24
RAB3GAP1-202ENST00000425393 LPCAT4Q643R3 524 aa1.06□□□□□ -2.24
RAB3GAP1-202ENST00000425393 OR51D1Q8NGF3 324 aa1.06□□□□□ -2.24
RAB3GAP1-202ENST00000425393 OR13C4Q8NGS5 318 aa1.06□□□□□ -2.24
RAB3GAP1-202ENST00000425393 REG4Q9BYZ8 158 aa1.06□□□□□ -2.24
RAB3GAP1-202ENST00000425393 PARVGQ9HBI0 331 aa1.06□□□□□ -2.24
RAB3GAP1-202ENST00000425393 CMTM6Q9NX76 183 aa1.06□□□□□ -2.24
RAB3GAP1-202ENST00000425393 PCDH15Q96QU1 1955 aa1.06□□□□□ -2.24
RAB3GAP1-202ENST00000425393 TENM3Q9P273 2699 aa1.06□□□□□ -2.24
RAB3GAP1-202ENST00000425393 AKAP13Q12802 2813 aa1.06□□□□□ -2.24
RAB3GAP1-202ENST00000425393 KCNK1O00180 336 aa1.05□□□□□ -2.24
RAB3GAP1-202ENST00000425393 UBBP0CG47 229 aa1.05□□□□□ -2.24
RAB3GAP1-202ENST00000425393 HIST1H1TP22492 207 aaPredicted RBP1.05□□□□□ -2.24
RAB3GAP1-202ENST00000425393 HIST1H2BOP23527 126 aa1.05□□□□□ -2.24
RAB3GAP1-202ENST00000425393 HIST1H2BBP33778 126 aa1.05□□□□□ -2.24
RAB3GAP1-202ENST00000425393 HIST1H2BDP58876 126 aa1.05□□□□□ -2.24
RAB3GAP1-202ENST00000425393 HIST1H2BCP62807 126 aa1.05□□□□□ -2.24
RAB3GAP1-202ENST00000425393 RUNX1Q01196 453 aa1.05□□□□□ -2.24
RAB3GAP1-202ENST00000425393 HIST2H2BEQ16778 126 aa1.05□□□□□ -2.24
RAB3GAP1-202ENST00000425393 DEFB113Q30KQ7 82 aa1.05□□□□□ -2.24
RAB3GAP1-202ENST00000425393 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.05□□□□□ -2.24
RAB3GAP1-202ENST00000425393 CCDC122Q5T0U0 273 aa1.05□□□□□ -2.24
RAB3GAP1-202ENST00000425393 RPL22L1Q6P5R6 122 aaKnown RBP1.05□□□□□ -2.24
RAB3GAP1-202ENST00000425393 LCN15Q6UWW0 184 aa1.05□□□□□ -2.24
RAB3GAP1-202ENST00000425393 ZNF826PQ6ZT77 177 aa1.05□□□□□ -2.24
RAB3GAP1-202ENST00000425393 ZNF565Q8N9K5 539 aa1.05□□□□□ -2.24
RAB3GAP1-202ENST00000425393 HIST1H2BHQ93079 126 aa1.05□□□□□ -2.24
RAB3GAP1-202ENST00000425393 RMND5BQ96G75 393 aaPredicted RBP1.05□□□□□ -2.24
RAB3GAP1-202ENST00000425393 OR52E6Q96RD3 313 aa1.05□□□□□ -2.24
RAB3GAP1-202ENST00000425393 HIST1H2BNQ99877 126 aa1.05□□□□□ -2.24
RAB3GAP1-202ENST00000425393 HIST1H2BMQ99879 126 aa1.05□□□□□ -2.24
RAB3GAP1-202ENST00000425393 GUCA1BQ9UMX6 200 aa1.05□□□□□ -2.24
RAB3GAP1-202ENST00000425393 MGAQ8IWI9 3026 aa1.05□□□□□ -2.24
RAB3GAP1-202ENST00000425393 INTS1Q8N201 2190 aaKnown RBP1.05□□□□□ -2.24
RAB3GAP1-202ENST00000425393 BSNQ9UPA5 3926 aa1.05□□□□□ -2.24
RAB3GAP1-202ENST00000425393 SIPA1L3O60292 1781 aaPredicted RBP1.05□□□□□ -2.24
RAB3GAP1-202ENST00000425393 CADP27708 2225 aa1.05□□□□□ -2.24
RAB3GAP1-202ENST00000425393 NUP98P52948 1817 aa1.05□□□□□ -2.24
RAB3GAP1-202ENST00000425393 DOCK1Q14185 1865 aa1.05□□□□□ -2.24
RAB3GAP1-202ENST00000425393 MXRA5Q9NR99 2828 aa1.05□□□□□ -2.24
RAB3GAP1-202ENST00000425393 ABCA1O95477 2261 aa1.04□□□□□ -2.24
RAB3GAP1-202ENST00000425393 AKAP6Q13023 2319 aa1.04□□□□□ -2.24
RAB3GAP1-202ENST00000425393 KMT2CQ8NEZ4 4911 aaKnown RBP1.04□□□□□ -2.24
RAB3GAP1-202ENST00000425393 TLCD2A6NGC4 264 aa1.04□□□□□ -2.24
RAB3GAP1-202ENST00000425393 TMEM212A6NML5 194 aa1.04□□□□□ -2.24
RAB3GAP1-202ENST00000425393 AHSA1O95433 338 aa1.04□□□□□ -2.24
RAB3GAP1-202ENST00000425393 SHBGP04278 402 aa1.04□□□□□ -2.24
RAB3GAP1-202ENST00000425393 CTSDP07339 412 aaPredicted RBP1.04□□□□□ -2.24
RAB3GAP1-202ENST00000425393 UBE2IP63279 158 aaKnown RBP1.04□□□□□ -2.24
RAB3GAP1-202ENST00000425393 Q6ZQT0 140 aa1.04□□□□□ -2.24
RAB3GAP1-202ENST00000425393 TEX29Q8N6K0 151 aa1.04□□□□□ -2.24
RAB3GAP1-202ENST00000425393 TMEM106AQ96A25 262 aa1.04□□□□□ -2.24
RAB3GAP1-202ENST00000425393 MRPS26Q9BYN8 205 aaKnown RBP1.04□□□□□ -2.24
RAB3GAP1-202ENST00000425393 DLG5Q8TDM6 1919 aa1.04□□□□□ -2.24
RAB3GAP1-202ENST00000425393 ROCK2O75116 1388 aaKnown RBP1.04□□□□□ -2.24
RAB3GAP1-202ENST00000425393 PRRC2CQ9Y520 2896 aaKnown RBP1.03□□□□□ -2.24
RAB3GAP1-202ENST00000425393 DCHS2Q6V1P9 2916 aa1.03□□□□□ -2.24
RAB3GAP1-202ENST00000425393 MYOFQ9NZM1 2061 aa1.03□□□□□ -2.24
RAB3GAP1-202ENST00000425393 TGIF2-C20orf24A0A0A6YYL0 155 aa1.03□□□□□ -2.24
RAB3GAP1-202ENST00000425393 NIPSNAP2O75323 286 aa1.03□□□□□ -2.24
RAB3GAP1-202ENST00000425393 TNFSF15O95150 251 aa1.03□□□□□ -2.24
RAB3GAP1-202ENST00000425393 SPCS2Q15005 226 aa1.03□□□□□ -2.24
RAB3GAP1-202ENST00000425393 IMPG1Q17R60 797 aa1.03□□□□□ -2.24
RAB3GAP1-202ENST00000425393 SPANXN3Q5MJ09 141 aa1.03□□□□□ -2.24
RAB3GAP1-202ENST00000425393 C20orf196Q8IYI0 205 aa1.03□□□□□ -2.24
RAB3GAP1-202ENST00000425393 PPTC7Q8NI37 304 aa1.03□□□□□ -2.24
RAB3GAP1-202ENST00000425393 IMP4Q96G21 291 aaKnown RBP1.03□□□□□ -2.24
RAB3GAP1-202ENST00000425393 ODF3Q96PU9 254 aa1.03□□□□□ -2.24
RAB3GAP1-202ENST00000425393 NIPSNAP1Q9BPW8 284 aa1.03□□□□□ -2.24
RAB3GAP1-202ENST00000425393 FBXL12Q9NXK8 326 aa1.03□□□□□ -2.24
RAB3GAP1-202ENST00000425393 HEATR5AQ86XA9 2040 aa1.03□□□□□ -2.25
RAB3GAP1-202ENST00000425393 HLA-DRB1P01911 266 aa1.02□□□□□ -2.25
RAB3GAP1-202ENST00000425393 HTR1AP08908 422 aa1.02□□□□□ -2.25
RAB3GAP1-202ENST00000425393 EIF2B2P49770 351 aaKnown RBP1.02□□□□□ -2.25
RAB3GAP1-202ENST00000425393 SPCS3P61009 180 aa1.02□□□□□ -2.25
RAB3GAP1-202ENST00000425393 SNRPD2P62316 118 aaKnown RBP1.02□□□□□ -2.25
RAB3GAP1-202ENST00000425393 ATG2AQ2TAZ0 1938 aa1.02□□□□□ -2.25
RAB3GAP1-202ENST00000425393 ACOT6Q3I5F7 207 aaPredicted RBP1.02□□□□□ -2.25
RAB3GAP1-202ENST00000425393 HIST2H3PS2Q5TEC6 136 aa1.02□□□□□ -2.25
RAB3GAP1-202ENST00000425393 PTRHD1Q6GMV3 140 aaKnown RBP1.02□□□□□ -2.25
RAB3GAP1-202ENST00000425393 C12orf29Q8N999 325 aa1.02□□□□□ -2.25
RAB3GAP1-202ENST00000425393 UNC13CQ8NB66 2214 aa1.02□□□□□ -2.25
RAB3GAP1-202ENST00000425393 WFDC11Q8NEX6 87 aa1.02□□□□□ -2.25
RAB3GAP1-202ENST00000425393 TERB2Q8NHR7 220 aa1.02□□□□□ -2.25
RAB3GAP1-202ENST00000425393 AQP3Q92482 292 aa1.02□□□□□ -2.25
RAB3GAP1-202ENST00000425393 PARD6GQ9BYG4 376 aaPredicted RBP1.02□□□□□ -2.25
RAB3GAP1-202ENST00000425393 TENM2Q9NT68 2774 aa1.02□□□□□ -2.25
RAB3GAP1-202ENST00000425393 MRPL27Q9P0M9 148 aaKnown RBP1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms