RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 ADAMTSL5Q6ZMM2 481 aa1.84□□□□□ -2.12
VPS13A-208ENST00000423463 Q6ZVQ6 151 aa1.84□□□□□ -2.12
VPS13A-208ENST00000423463 UBAC2Q8NBM4 344 aa1.84□□□□□ -2.12
VPS13A-208ENST00000423463 OR52B4Q8NGK2 314 aa1.84□□□□□ -2.12
VPS13A-208ENST00000423463 OR4D5Q8NGN0 318 aa1.84□□□□□ -2.12
VPS13A-208ENST00000423463 OR1S2Q8NGQ3 325 aa1.84□□□□□ -2.12
VPS13A-208ENST00000423463 C11orf45Q8TAV5 145 aa1.84□□□□□ -2.12
VPS13A-208ENST00000423463 DYNLRB2Q8TF09 96 aa1.84□□□□□ -2.12
VPS13A-208ENST00000423463 Q8WTZ3 238 aa1.84□□□□□ -2.12
VPS13A-208ENST00000423463 SMIM8Q96KF7 97 aa1.84□□□□□ -2.12
VPS13A-208ENST00000423463 C2orf50Q96LR7 162 aa1.84□□□□□ -2.12
VPS13A-208ENST00000423463 RAB40CQ96S21 281 aa1.84□□□□□ -2.12
VPS13A-208ENST00000423463 GINS3Q9BRX5 216 aa1.84□□□□□ -2.12
VPS13A-208ENST00000423463 MARVELD1Q9BSK0 173 aa1.84□□□□□ -2.12
VPS13A-208ENST00000423463 DAZ1Q9NQZ3 744 aaKnown RBP1.84□□□□□ -2.12
VPS13A-208ENST00000423463 SMPXQ9UHP9 88 aa1.84□□□□□ -2.12
VPS13A-208ENST00000423463 STRAPQ9Y3F4 350 aaKnown RBP1.84□□□□□ -2.12
VPS13A-208ENST00000423463 TRAV14DV4A0A0A6YYC5 116 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 IGHV3-35A0A0C4DH35 117 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 IGHV7-4-1A0A0J9YVY3 117 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 MPTX1A8MV57 137 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 K7EQD1 137 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 YIF1AO95070 293 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 IGKV1-17P01599 117 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 IGHV3-48P01763 117 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 FABP1P07148 127 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 IAPPP10997 89 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 NPPCP23582 126 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 RND2P52198 227 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 CMC4P56277 68 aaPredicted RBP1.83□□□□□ -2.12
VPS13A-208ENST00000423463 DSCR10P59022 87 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 POLR2GP62487 172 aaKnown RBP eCLIP1.83□□□□□ -2.12
VPS13A-208ENST00000423463 IL15RAQ13261 267 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 TOMM20LQ6UXN7 152 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 SLC16A13Q7RTY0 426 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 STHQ8IWL8 128 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 SLC35E1Q96K37 410 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 OR10C1Q96KK4 312 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 SEC22CQ9BRL7 303 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 SPXQ9BT56 116 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 C20orf24Q9BUV8 137 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 MAGT1Q9H0U3 335 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 ZC4H2Q9NQZ6 224 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 PSENENQ9NZ42 101 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 MRPL36Q9P0J6 103 aaKnown RBP1.83□□□□□ -2.12
VPS13A-208ENST00000423463 GSKIPQ9P0R6 139 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 SMAD5-AS1Q9Y6J3 95 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 SVEP1Q4LDE5 3571 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 DNHD1Q96M86 4753 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 CUBNO60494 3623 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 L7N2F9 121 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 CHEK1O14757 476 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 TSC22D2O75157 780 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 CFDP00746 253 aaPredicted RBP1.83□□□□□ -2.12
VPS13A-208ENST00000423463 IGLC1P0CG04 106 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 RD3LP0DJH9 198 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 PVALBP20472 110 aaPredicted RBP1.83□□□□□ -2.12
VPS13A-208ENST00000423463 OR10J1P30954 320 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 GAMTQ14353 236 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 GUCA2BQ16661 112 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 TIGITQ495A1 244 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 SPANXN5Q5MJ07 72 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.83□□□□□ -2.12
VPS13A-208ENST00000423463 TMEM61Q8N0U2 210 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 OR10G7Q8NGN6 311 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 NARS2Q96I59 477 aaKnown RBP1.83□□□□□ -2.12
VPS13A-208ENST00000423463 ZNF414Q96IQ9 312 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 TRGV9Q99603 122 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 SPAG8Q99932 426 aaPredicted RBP1.83□□□□□ -2.12
VPS13A-208ENST00000423463 B9D2Q9BPU9 175 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 RHPN1-AS1Q9BWJ2 59 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 TMEM231Q9H6L2 316 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 VSIRQ9H7M9 311 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 MLXQ9UH92 298 aa1.83□□□□□ -2.12
VPS13A-208ENST00000423463 PAIP2BQ9ULR5 123 aaKnown RBP1.83□□□□□ -2.12
VPS13A-208ENST00000423463 PUS1Q9Y606 427 aaKnown RBP eCLIP1.83□□□□□ -2.12
VPS13A-208ENST00000423463 TRAV2A0A0B4J234 112 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 IZUMO1RA6ND01 250 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 ZFP92A6NM28 416 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 FAM25EA8MYX2 175 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 FNDC10F2Z333 226 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 K7EPK0 472 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 ZNF207O43670 478 aaKnown RBP1.82□□□□□ -2.12
VPS13A-208ENST00000423463 DEDDO75618 318 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 NXPH4O95158 308 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 PTTG1O95997 202 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 RLN2P04090 185 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 CRYBB3P26998 211 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 S100A7P31151 101 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 PAFAH1B2P68402 229 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 TMEM14EPQ6UXP3 125 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 TMEM144Q7Z5S9 345 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 OR10P1Q8NGE3 313 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 ACY3Q96HD9 319 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 METTL26Q96S19 204 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 GGACTQ9BVM4 153 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 NBEAL1Q6ZS30 2694 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 IGKV1D-37A0A075B6S9 117 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 IGHV3OR16-8A0A075B7F1 116 aa1.82□□□□□ -2.12
VPS13A-208ENST00000423463 C7orf66A4D0T2 115 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms