RNA–Protein interactions for RNA: ENST00000422797.5

LIMS1-207, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene LIMS1, Length 1,544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-207ENST00000422797 MRPS12O15235 138 aaKnown RBP8.7□□□□□ -1.02
LIMS1-207ENST00000422797 CSN3P07498 182 aa8.7□□□□□ -1.02
LIMS1-207ENST00000422797 RPL7P18124 248 aaKnown RBP8.7□□□□□ -1.02
LIMS1-207ENST00000422797 NBL1P41271 181 aa8.7□□□□□ -1.02
LIMS1-207ENST00000422797 C21orf62-AS1Q17RA5 79 aa8.7□□□□□ -1.02
LIMS1-207ENST00000422797 AMMECR1LQ6DCA0 310 aa8.7□□□□□ -1.02
LIMS1-207ENST00000422797 Q6ZVH6 145 aa8.7□□□□□ -1.02
LIMS1-207ENST00000422797 BOD1L2Q8IYS8 172 aa8.7□□□□□ -1.02
LIMS1-207ENST00000422797 Q9UFV3 132 aa8.7□□□□□ -1.02
LIMS1-207ENST00000422797 RABAC1Q9UI14 185 aa8.7□□□□□ -1.02
LIMS1-207ENST00000422797 SPAARA0A1B0GVQ0 90 aa8.7□□□□□ -1.02
LIMS1-207ENST00000422797 A1L4Q6 167 aa8.7□□□□□ -1.02
LIMS1-207ENST00000422797 C9orf118A6NHY6 69 aa8.7□□□□□ -1.02
LIMS1-207ENST00000422797 CBY3A6NI87 242 aa8.7□□□□□ -1.02
LIMS1-207ENST00000422797 NPIPB5A8MRT5 1133 aa8.7□□□□□ -1.02
LIMS1-207ENST00000422797 LY6LH3BQJ8 138 aa8.7□□□□□ -1.02
LIMS1-207ENST00000422797 CNIH1O95406 144 aa8.7□□□□□ -1.02
LIMS1-207ENST00000422797 MFAP4P55083 255 aa8.7□□□□□ -1.02
LIMS1-207ENST00000422797 RUSC1-AS1Q66K80 236 aa8.7□□□□□ -1.02
LIMS1-207ENST00000422797 C22orf34Q6ZV56 151 aa8.7□□□□□ -1.02
LIMS1-207ENST00000422797 ZNF491Q8N8L2 437 aa8.7□□□□□ -1.02
LIMS1-207ENST00000422797 VPS25Q9BRG1 176 aa8.7□□□□□ -1.02
LIMS1-207ENST00000422797 FBXL15Q9H469 300 aa8.7□□□□□ -1.02
LIMS1-207ENST00000422797 SIGLEC8Q9NYZ4 499 aa8.7□□□□□ -1.02
LIMS1-207ENST00000422797 KNTC1P50748 2209 aa8.69□□□□□ -1.02
LIMS1-207ENST00000422797 GVINP1Q7Z2Y8 2422 aa8.69□□□□□ -1.02
LIMS1-207ENST00000422797 A0A087X0K7 114 aa8.69□□□□□ -1.02
LIMS1-207ENST00000422797 IGHV3-21A0A0B4J1V1 117 aa8.69□□□□□ -1.02
LIMS1-207ENST00000422797 GAGE10A6NGK3 116 aa8.69□□□□□ -1.02
LIMS1-207ENST00000422797 LINC01546A6NGU7 62 aa8.69□□□□□ -1.02
LIMS1-207ENST00000422797 ZNF785A8K8V0 405 aa8.69□□□□□ -1.02
LIMS1-207ENST00000422797 NBR2O15453 112 aa8.69□□□□□ -1.02
LIMS1-207ENST00000422797 NDUFA3O95167 84 aa8.69□□□□□ -1.02
LIMS1-207ENST00000422797 IL4P05112 153 aa8.69□□□□□ -1.02
LIMS1-207ENST00000422797 FGF6P10767 208 aa8.69□□□□□ -1.02
LIMS1-207ENST00000422797 CD24P25063 80 aa8.69□□□□□ -1.02
LIMS1-207ENST00000422797 CNTFRP26992 372 aa8.69□□□□□ -1.02
LIMS1-207ENST00000422797 LDLRAD2Q5SZI1 272 aa8.69□□□□□ -1.02
LIMS1-207ENST00000422797 NPBQ8NG41 125 aa8.69□□□□□ -1.02
LIMS1-207ENST00000422797 OR5A1Q8NGJ0 315 aa8.69□□□□□ -1.02
LIMS1-207ENST00000422797 THYN1Q9P016 225 aa8.69□□□□□ -1.02
LIMS1-207ENST00000422797 KMT2BQ9UMN6 2715 aaPredicted RBP8.68□□□□□ -1.02
LIMS1-207ENST00000422797 EPG5Q9HCE0 2579 aa8.68□□□□□ -1.02
LIMS1-207ENST00000422797 DCHS1Q96JQ0 3298 aa8.68□□□□□ -1.02
LIMS1-207ENST00000422797 GAGE12BA1L429 117 aa8.68□□□□□ -1.02
LIMS1-207ENST00000422797 D6R8Y8 96 aa8.68□□□□□ -1.02
LIMS1-207ENST00000422797 H0Y8G0 127 aa8.68□□□□□ -1.02
LIMS1-207ENST00000422797 GNG7O60262 68 aa8.68□□□□□ -1.02
LIMS1-207ENST00000422797 HLA-DRB4P13762 266 aa8.68□□□□□ -1.02
LIMS1-207ENST00000422797 RAB9AP51151 201 aa8.68□□□□□ -1.02
LIMS1-207ENST00000422797 ZNF138P52744 262 aa8.68□□□□□ -1.02
LIMS1-207ENST00000422797 LYZL1Q6UWQ5 148 aa8.68□□□□□ -1.02
LIMS1-207ENST00000422797 IFI27L1Q96BM0 104 aa8.68□□□□□ -1.02
LIMS1-207ENST00000422797 NXT2Q9NPJ8 142 aaKnown RBP8.68□□□□□ -1.02
LIMS1-207ENST00000422797 SMPXQ9UHP9 88 aa8.68□□□□□ -1.02
LIMS1-207ENST00000422797 HLA-DRB4X5D2U9 266 aa8.68□□□□□ -1.02
LIMS1-207ENST00000422797 MYO15AQ9UKN7 3530 aa8.68□□□□□ -1.02
LIMS1-207ENST00000422797 PCNX2A6NKB5 2137 aa8.67□□□□□ -1.02
LIMS1-207ENST00000422797 SPEGQ15772 3267 aa8.67□□□□□ -1.02
LIMS1-207ENST00000422797 PPIAL4CA0A0B4J2A2 164 aa8.67□□□□□ -1.02
LIMS1-207ENST00000422797 OOSP1A8MZH6 123 aa8.67□□□□□ -1.02
LIMS1-207ENST00000422797 SH2D1AO60880 128 aa8.67□□□□□ -1.02
LIMS1-207ENST00000422797 PPIAL4GP0DN37 164 aa8.67□□□□□ -1.02
LIMS1-207ENST00000422797 IFI27P40305 119 aaPredicted RBP8.67□□□□□ -1.02
LIMS1-207ENST00000422797 CRIP1P50238 77 aa8.67□□□□□ -1.02
LIMS1-207ENST00000422797 RNF151Q2KHN1 245 aa8.67□□□□□ -1.02
LIMS1-207ENST00000422797 FER1L6-AS1Q8NA97 138 aa8.67□□□□□ -1.02
LIMS1-207ENST00000422797 OR8A1Q8NGG7 326 aa8.67□□□□□ -1.02
LIMS1-207ENST00000422797 MAP1LC3AQ9H492 121 aa8.67□□□□□ -1.02
LIMS1-207ENST00000422797 HIGD1BQ9P298 99 aa8.67□□□□□ -1.02
LIMS1-207ENST00000422797 A0A096LNJ9 63 aa8.66□□□□□ -1.02
LIMS1-207ENST00000422797 E7EQL1 145 aa8.66□□□□□ -1.02
LIMS1-207ENST00000422797 K7EP34 96 aa8.66□□□□□ -1.02
LIMS1-207ENST00000422797 CD3EP07766 207 aa8.66□□□□□ -1.02
LIMS1-207ENST00000422797 FCGR2BP31994 310 aaPredicted RBP8.66□□□□□ -1.02
LIMS1-207ENST00000422797 CKS2P33552 79 aa8.66□□□□□ -1.02
LIMS1-207ENST00000422797 PAX8Q06710 450 aa8.66□□□□□ -1.02
LIMS1-207ENST00000422797 MRPL51Q4U2R6 128 aaKnown RBP8.66□□□□□ -1.02
LIMS1-207ENST00000422797 UFSP1Q6NVU6 142 aa8.66□□□□□ -1.02
LIMS1-207ENST00000422797 LY6G5BQ8NDX9 201 aa8.66□□□□□ -1.02
LIMS1-207ENST00000422797 OR11H6Q8NGC7 330 aa8.66□□□□□ -1.02
LIMS1-207ENST00000422797 CNFNQ9BYD5 112 aa8.66□□□□□ -1.02
LIMS1-207ENST00000422797 DPM3Q9P2X0 92 aa8.66□□□□□ -1.02
LIMS1-207ENST00000422797 IGLV11-55A0A075B6I3 123 aa8.65□□□□□ -1.02
LIMS1-207ENST00000422797 TRAV8-6A0A0B4J262 113 aa8.65□□□□□ -1.02
LIMS1-207ENST00000422797 M0R1W7 72 aa8.65□□□□□ -1.02
LIMS1-207ENST00000422797 IGLC6P0CF74 106 aa8.65□□□□□ -1.02
LIMS1-207ENST00000422797 CACNG7P62955 275 aa8.65□□□□□ -1.02
LIMS1-207ENST00000422797 CCDC144NLQ6NUI1 221 aa8.65□□□□□ -1.02
LIMS1-207ENST00000422797 LHFPL4Q7Z7J7 247 aa8.65□□□□□ -1.02
LIMS1-207ENST00000422797 PRR25Q96S07 402 aa8.65□□□□□ -1.02
LIMS1-207ENST00000422797 TPPP3Q9BW30 176 aa8.65□□□□□ -1.02
LIMS1-207ENST00000422797 RBAKDNA6NC62 111 aa8.64□□□□□ -1.03
LIMS1-207ENST00000422797 TIMM23O14925 209 aa8.64□□□□□ -1.03
LIMS1-207ENST00000422797 ATP5LO75964 103 aa8.64□□□□□ -1.03
LIMS1-207ENST00000422797 NCR2O95944 276 aa8.64□□□□□ -1.03
LIMS1-207ENST00000422797 SMIM17P0DL12 118 aa8.64□□□□□ -1.03
LIMS1-207ENST00000422797 APELAP0DMC3 54 aa8.64□□□□□ -1.03
LIMS1-207ENST00000422797 COX7A1P24310 79 aa8.64□□□□□ -1.03
LIMS1-207ENST00000422797 AMN1Q8IY45 258 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms