RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 ZNF586Q9NXT0 402 aa11.75□□□□□ -0.53
DDX55-203ENST00000421670 MEGF8Q7Z7M0 2845 aa11.75□□□□□ -0.53
DDX55-203ENST00000421670 A0A1B0GV50 99 aa11.75□□□□□ -0.53
DDX55-203ENST00000421670 OR4C46A6NHA9 309 aa11.75□□□□□ -0.53
DDX55-203ENST00000421670 K7EQG2 157 aa11.75□□□□□ -0.53
DDX55-203ENST00000421670 SOCS3O14543 225 aa11.75□□□□□ -0.53
DDX55-203ENST00000421670 RAB5CP51148 216 aa11.75□□□□□ -0.53
DDX55-203ENST00000421670 BEAN1Q3B7T3 259 aa11.75□□□□□ -0.53
DDX55-203ENST00000421670 TEX261Q6UWH6 196 aa11.75□□□□□ -0.53
DDX55-203ENST00000421670 DPPA3Q6W0C5 159 aa11.75□□□□□ -0.53
DDX55-203ENST00000421670 PQLC2Q6ZP29 291 aa11.75□□□□□ -0.53
DDX55-203ENST00000421670 IQCF2Q8IXL9 164 aa11.75□□□□□ -0.53
DDX55-203ENST00000421670 RNF141Q8WVD5 230 aa11.75□□□□□ -0.53
DDX55-203ENST00000421670 CD7P09564 240 aa11.74□□□□□ -0.53
DDX55-203ENST00000421670 HIST1H1EP10412 219 aaKnown RBP11.74□□□□□ -0.53
DDX55-203ENST00000421670 IGFL4Q6B9Z1 124 aa11.74□□□□□ -0.53
DDX55-203ENST00000421670 TRBV19A0A075B6N1 114 aa11.73□□□□□ -0.53
DDX55-203ENST00000421670 ZNF705EA8MWA4 302 aaPredicted RBP11.73□□□□□ -0.53
DDX55-203ENST00000421670 CXorf1O96002 111 aa11.73□□□□□ -0.53
DDX55-203ENST00000421670 ZNF688P0C7X2 276 aa11.73□□□□□ -0.53
DDX55-203ENST00000421670 GCHFRP30047 84 aa11.73□□□□□ -0.53
DDX55-203ENST00000421670 MEOX2P50222 304 aa11.73□□□□□ -0.53
DDX55-203ENST00000421670 CD81P60033 236 aa11.73□□□□□ -0.53
DDX55-203ENST00000421670 LRRC20Q8TCA0 184 aa11.73□□□□□ -0.53
DDX55-203ENST00000421670 SFT2D1Q8WV19 159 aa11.73□□□□□ -0.53
DDX55-203ENST00000421670 C16orf92Q96LL3 132 aa11.73□□□□□ -0.53
DDX55-203ENST00000421670 TMPRSS5Q9H3S3 457 aa11.73□□□□□ -0.53
DDX55-203ENST00000421670 UBQLN2Q9UHD9 624 aa11.73□□□□□ -0.53
DDX55-203ENST00000421670 TRAV2A0A0B4J234 112 aa11.72□□□□□ -0.53
DDX55-203ENST00000421670 TRAV8-2A0A0B4J237 113 aa11.72□□□□□ -0.53
DDX55-203ENST00000421670 PRB2P02812 416 aaPredicted RBP11.72□□□□□ -0.53
DDX55-203ENST00000421670 H2AFB1P0C5Y9 115 aa11.72□□□□□ -0.53
DDX55-203ENST00000421670 NBEAP1P0C6P0 100 aa11.72□□□□□ -0.53
DDX55-203ENST00000421670 ODF3L2Q3SX64 289 aa11.72□□□□□ -0.53
DDX55-203ENST00000421670 KPRPQ5T749 579 aaPredicted RBP11.72□□□□□ -0.53
DDX55-203ENST00000421670 RNF182Q8N6D2 247 aa11.72□□□□□ -0.53
DDX55-203ENST00000421670 ZNF680Q8NEM1 530 aa11.72□□□□□ -0.53
DDX55-203ENST00000421670 SAT2Q96F10 170 aaPredicted RBP11.72□□□□□ -0.53
DDX55-203ENST00000421670 WFDC10AQ9H1F0 79 aa11.72□□□□□ -0.53
DDX55-203ENST00000421670 NDUFB4O95168 129 aa11.71□□□□□ -0.53
DDX55-203ENST00000421670 HLA-DMBP28068 263 aa11.71□□□□□ -0.53
DDX55-203ENST00000421670 GUK1Q16774 197 aa11.71□□□□□ -0.53
DDX55-203ENST00000421670 GTSCR1Q86UQ5 136 aa11.71□□□□□ -0.53
DDX55-203ENST00000421670 MBD3L1Q8WWY6 194 aa11.71□□□□□ -0.53
DDX55-203ENST00000421670 MAP6D1Q9H9H5 199 aa11.71□□□□□ -0.53
DDX55-203ENST00000421670 AGRNO00468 2067 aa11.71□□□□□ -0.53
DDX55-203ENST00000421670 ISLRO14498 428 aa11.71□□□□□ -0.54
DDX55-203ENST00000421670 PRB4P10163 310 aaPredicted RBP11.71□□□□□ -0.54
DDX55-203ENST00000421670 PSMB3P49720 205 aa11.71□□□□□ -0.54
DDX55-203ENST00000421670 PSMG4Q5JS54 123 aa11.71□□□□□ -0.54
DDX55-203ENST00000421670 C20orf173Q96LM9 149 aa11.71□□□□□ -0.54
DDX55-203ENST00000421670 LINC00052Q96N35 136 aa11.71□□□□□ -0.54
DDX55-203ENST00000421670 ZNF331Q9NQX6 463 aaPredicted RBP11.71□□□□□ -0.54
DDX55-203ENST00000421670 IFNA7P01567 189 aa11.7□□□□□ -0.54
DDX55-203ENST00000421670 SNRPD3P62318 126 aaKnown RBP11.7□□□□□ -0.54
DDX55-203ENST00000421670 PDE6HQ13956 83 aa11.7□□□□□ -0.54
DDX55-203ENST00000421670 ZNF124Q15973 351 aa11.7□□□□□ -0.54
DDX55-203ENST00000421670 EXOC3-AS1Q8N2X6 119 aa11.7□□□□□ -0.54
DDX55-203ENST00000421670 PCNPQ8WW12 178 aaKnown RBP11.7□□□□□ -0.54
DDX55-203ENST00000421670 SLC50A1Q9BRV3 221 aa11.7□□□□□ -0.54
DDX55-203ENST00000421670 ZMAT5Q9UDW3 170 aaKnown RBP11.7□□□□□ -0.54
DDX55-203ENST00000421670 ID1P41134 155 aa11.69□□□□□ -0.54
DDX55-203ENST00000421670 DEFB131AP59861 70 aa11.69□□□□□ -0.54
DDX55-203ENST00000421670 DEFB1P60022 68 aa11.69□□□□□ -0.54
DDX55-203ENST00000421670 RANP62826 216 aaKnown RBP11.69□□□□□ -0.54
DDX55-203ENST00000421670 SAMD13Q5VXD3 122 aa11.69□□□□□ -0.54
DDX55-203ENST00000421670 APRG1Q8IVJ8 170 aa11.69□□□□□ -0.54
DDX55-203ENST00000421670 TMEM167BQ9NRX6 74 aa11.69□□□□□ -0.54
DDX55-203ENST00000421670 C19orf73Q9NVV2 129 aa11.69□□□□□ -0.54
DDX55-203ENST00000421670 OR11H12B2RN74 326 aa11.68□□□□□ -0.54
DDX55-203ENST00000421670 ZNF253O75346 499 aa11.68□□□□□ -0.54
DDX55-203ENST00000421670 Q8N1Y9 231 aa11.68□□□□□ -0.54
DDX55-203ENST00000421670 SUN5Q8TC36 379 aa11.68□□□□□ -0.54
DDX55-203ENST00000421670 AURKAIP1Q9NWT8 199 aaPredicted RBP11.68□□□□□ -0.54
DDX55-203ENST00000421670 UBE2G2P60604 165 aa11.67□□□□□ -0.54
DDX55-203ENST00000421670 CCL20P78556 96 aa11.67□□□□□ -0.54
DDX55-203ENST00000421670 PSG9Q00887 426 aa11.67□□□□□ -0.54
DDX55-203ENST00000421670 IFITM2Q01629 132 aa11.67□□□□□ -0.54
DDX55-203ENST00000421670 Q9H3A6 140 aa11.67□□□□□ -0.54
DDX55-203ENST00000421670 ZNF705FA8MVS1 300 aaPredicted RBP11.67□□□□□ -0.54
DDX55-203ENST00000421670 M0R3E3 92 aa11.67□□□□□ -0.54
DDX55-203ENST00000421670 ICAM4Q14773 271 aa11.67□□□□□ -0.54
DDX55-203ENST00000421670 DEFB125Q8N687 156 aa11.67□□□□□ -0.54
DDX55-203ENST00000421670 ZNF738Q8NE65 137 aa11.67□□□□□ -0.54
DDX55-203ENST00000421670 AAMDCQ9H7C9 122 aa11.67□□□□□ -0.54
DDX55-203ENST00000421670 YTHDF2Q9Y5A9 579 aaKnown RBP11.67□□□□□ -0.54
DDX55-203ENST00000421670 TRAV1-1A0A0B4J248 108 aa11.66□□□□□ -0.54
DDX55-203ENST00000421670 F6UB75 175 aa11.66□□□□□ -0.54
DDX55-203ENST00000421670 HBE1P02100 147 aa11.66□□□□□ -0.54
DDX55-203ENST00000421670 BLOC1S1P78537 153 aa11.66□□□□□ -0.54
DDX55-203ENST00000421670 PSG3Q16557 428 aa11.66□□□□□ -0.54
DDX55-203ENST00000421670 GDF5OSQ5U4N7 250 aa11.66□□□□□ -0.54
DDX55-203ENST00000421670 GGTLC3B5MD39 225 aa11.65□□□□□ -0.54
DDX55-203ENST00000421670 TEX46H3BTG2 121 aa11.65□□□□□ -0.54
DDX55-203ENST00000421670 CITED4Q96RK1 184 aa11.65□□□□□ -0.54
DDX55-203ENST00000421670 FAM110AQ9BQ89 295 aa11.65□□□□□ -0.54
DDX55-203ENST00000421670 FAM74A7A6NL05 159 aa11.64□□□□□ -0.55
DDX55-203ENST00000421670 KNCNA6PVL3 124 aa11.64□□□□□ -0.55
DDX55-203ENST00000421670 PRAC2D3DTV9 90 aa11.64□□□□□ -0.55
DDX55-203ENST00000421670 LYPD1Q8N2G4 141 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms