RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 FAM74A7A6NL05 159 aa16.27■□□□□ 0.2
ABCF3-202ENST00000421340 PSG9Q00887 426 aa16.27■□□□□ 0.2
ABCF3-202ENST00000421340 DEFB114Q30KQ6 69 aa16.27■□□□□ 0.2
ABCF3-202ENST00000421340 ZNF506Q5JVG8 444 aa16.27■□□□□ 0.2
ABCF3-202ENST00000421340 EIF4E3Q8N5X7 224 aaKnown RBP16.27■□□□□ 0.2
ABCF3-202ENST00000421340 CLEC5AQ9NY25 188 aa16.27■□□□□ 0.2
ABCF3-202ENST00000421340 VAX2Q9UIW0 290 aa16.27■□□□□ 0.2
ABCF3-202ENST00000421340 TRAV25A0A0B4J276 109 aa16.26■□□□□ 0.19
ABCF3-202ENST00000421340 LOC102723971A0A1B0GUV8 181 aa16.26■□□□□ 0.19
ABCF3-202ENST00000421340 PAGE4O60829 102 aa16.26■□□□□ 0.19
ABCF3-202ENST00000421340 NDUFB4O95168 129 aa16.26■□□□□ 0.19
ABCF3-202ENST00000421340 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.26■□□□□ 0.19
ABCF3-202ENST00000421340 OR2K2Q8NGT1 345 aa16.26■□□□□ 0.19
ABCF3-202ENST00000421340 BLNKQ8WV28 456 aa16.26■□□□□ 0.19
ABCF3-202ENST00000421340 NRN1Q9NPD7 142 aa16.26■□□□□ 0.19
ABCF3-202ENST00000421340 HAGHQ16775 308 aa16.25■□□□□ 0.19
ABCF3-202ENST00000421340 DYNLRB2Q8TF09 96 aa16.25■□□□□ 0.19
ABCF3-202ENST00000421340 SLC50A1Q9BRV3 221 aa16.25■□□□□ 0.19
ABCF3-202ENST00000421340 YTHDF2Q9Y5A9 579 aaKnown RBP16.25■□□□□ 0.19
ABCF3-202ENST00000421340 TENM1Q9UKZ4 2725 aa16.25■□□□□ 0.19
ABCF3-202ENST00000421340 TRAV2A0A0B4J234 112 aa16.24■□□□□ 0.19
ABCF3-202ENST00000421340 INSL3P51460 131 aa16.24■□□□□ 0.19
ABCF3-202ENST00000421340 RANP62826 216 aaKnown RBP16.24■□□□□ 0.19
ABCF3-202ENST00000421340 RPL11P62913 178 aaKnown RBP16.24■□□□□ 0.19
ABCF3-202ENST00000421340 PEA15Q15121 130 aa16.24■□□□□ 0.19
ABCF3-202ENST00000421340 UQCC3Q6UW78 93 aa16.24■□□□□ 0.19
ABCF3-202ENST00000421340 ARL6IP6Q8N6S5 226 aa16.24■□□□□ 0.19
ABCF3-202ENST00000421340 TCEAL7Q9BRU2 100 aa16.24■□□□□ 0.19
ABCF3-202ENST00000421340 MCRIP2Q9BUT9 160 aaKnown RBP16.24■□□□□ 0.19
ABCF3-202ENST00000421340 EIF5A2Q9GZV4 153 aaKnown RBP16.24■□□□□ 0.19
ABCF3-202ENST00000421340 ZNF331Q9NQX6 463 aaPredicted RBP16.24■□□□□ 0.19
ABCF3-202ENST00000421340 OTORQ9NRC9 128 aa16.24■□□□□ 0.19
ABCF3-202ENST00000421340 TSPAN4O14817 238 aa16.23■□□□□ 0.19
ABCF3-202ENST00000421340 SNRPCP09234 159 aaKnown RBP16.23■□□□□ 0.19
ABCF3-202ENST00000421340 UBE2G2P60604 165 aa16.23■□□□□ 0.19
ABCF3-202ENST00000421340 PAFAH1B2P68402 229 aa16.23■□□□□ 0.19
ABCF3-202ENST00000421340 MEF2BQ02080 365 aaPredicted RBP16.23■□□□□ 0.19
ABCF3-202ENST00000421340 ICAM4Q14773 271 aa16.23■□□□□ 0.19
ABCF3-202ENST00000421340 CST9LP1Q5W188 147 aa16.23■□□□□ 0.19
ABCF3-202ENST00000421340 COMMD7Q86VX2 200 aa16.23■□□□□ 0.19
ABCF3-202ENST00000421340 CCDC28AQ8IWP9 274 aa16.23■□□□□ 0.19
ABCF3-202ENST00000421340 MDFIQ99750 246 aa16.23■□□□□ 0.19
ABCF3-202ENST00000421340 RARRES2Q99969 163 aa16.23■□□□□ 0.19
ABCF3-202ENST00000421340 Q9H3A6 140 aa16.23■□□□□ 0.19
ABCF3-202ENST00000421340 C11orf94C9JXX5 98 aa16.22■□□□□ 0.19
ABCF3-202ENST00000421340 H3BTX0 84 aa16.22■□□□□ 0.19
ABCF3-202ENST00000421340 SOCS3O14543 225 aa16.22■□□□□ 0.19
ABCF3-202ENST00000421340 SAP30O75446 220 aa16.22■□□□□ 0.19
ABCF3-202ENST00000421340 TOR2AQ5JU69 321 aa16.22■□□□□ 0.19
ABCF3-202ENST00000421340 RBPMS2Q6ZRY4 209 aaKnown RBP16.22■□□□□ 0.19
ABCF3-202ENST00000421340 MS4A6AQ9H2W1 248 aa16.22■□□□□ 0.19
ABCF3-202ENST00000421340 AAMDCQ9H7C9 122 aa16.22■□□□□ 0.19
ABCF3-202ENST00000421340 PRELID1Q9Y255 219 aa16.22■□□□□ 0.19
ABCF3-202ENST00000421340 PGPA6NDG6 321 aa16.21■□□□□ 0.19
ABCF3-202ENST00000421340 SLC17A3O00476 420 aa16.21■□□□□ 0.19
ABCF3-202ENST00000421340 PDE6DO43924 150 aa16.21■□□□□ 0.19
ABCF3-202ENST00000421340 IGLV1-51P01701 117 aa16.21■□□□□ 0.19
ABCF3-202ENST00000421340 SUMO1P63165 101 aaKnown RBP16.21■□□□□ 0.19
ABCF3-202ENST00000421340 DCANP1Q8TF63 244 aa16.21■□□□□ 0.19
ABCF3-202ENST00000421340 GGTLC3B5MD39 225 aa16.2■□□□□ 0.18
ABCF3-202ENST00000421340 ISLRO14498 428 aa16.2■□□□□ 0.18
ABCF3-202ENST00000421340 CD81P60033 236 aa16.2■□□□□ 0.18
ABCF3-202ENST00000421340 CD300EQ496F6 205 aaPredicted RBP16.2■□□□□ 0.18
ABCF3-202ENST00000421340 C9orf66Q5T8R8 295 aa16.2■□□□□ 0.18
ABCF3-202ENST00000421340 RXFP4Q8TDU9 374 aa16.2■□□□□ 0.18
ABCF3-202ENST00000421340 C16orf92Q96LL3 132 aa16.2■□□□□ 0.18
ABCF3-202ENST00000421340 TRAV8-2A0A0B4J237 113 aa16.19■□□□□ 0.18
ABCF3-202ENST00000421340 F6UZH7 168 aa16.19■□□□□ 0.18
ABCF3-202ENST00000421340 DNASE2O00115 360 aaPredicted RBP16.19■□□□□ 0.18
ABCF3-202ENST00000421340 CD33P20138 364 aa16.19■□□□□ 0.18
ABCF3-202ENST00000421340 ID1P41134 155 aa16.19■□□□□ 0.18
ABCF3-202ENST00000421340 TMEM61Q8N0U2 210 aa16.19■□□□□ 0.18
ABCF3-202ENST00000421340 C5orf17Q8NAS9 161 aa16.19■□□□□ 0.18
ABCF3-202ENST00000421340 MRPL53Q96EL3 112 aaKnown RBP16.19■□□□□ 0.18
ABCF3-202ENST00000421340 SPAG8Q99932 426 aaPredicted RBP16.19■□□□□ 0.18
ABCF3-202ENST00000421340 TMEM250H0YL14 139 aa16.18■□□□□ 0.18
ABCF3-202ENST00000421340 K7EQG2 157 aa16.18■□□□□ 0.18
ABCF3-202ENST00000421340 ATP5G3P48201 142 aa16.18■□□□□ 0.18
ABCF3-202ENST00000421340 SRSF3P84103 164 aaKnown RBP16.18■□□□□ 0.18
ABCF3-202ENST00000421340 KRTAP21-3Q3LHN1 58 aa16.18■□□□□ 0.18
ABCF3-202ENST00000421340 EXOC3-AS1Q8N2X6 119 aa16.18■□□□□ 0.18
ABCF3-202ENST00000421340 EPDR1Q9UM22 224 aa16.18■□□□□ 0.18
ABCF3-202ENST00000421340 HIST1H2BAQ96A08 127 aa16.17■□□□□ 0.18
ABCF3-202ENST00000421340 IGKV3-7A0A075B6H7 116 aa16.16■□□□□ 0.18
ABCF3-202ENST00000421340 OR4C46A6NHA9 309 aa16.16■□□□□ 0.18
ABCF3-202ENST00000421340 WIPF1O43516 503 aa16.16■□□□□ 0.18
ABCF3-202ENST00000421340 SLC25A5P05141 298 aaKnown RBP16.16■□□□□ 0.18
ABCF3-202ENST00000421340 SRP19P09132 144 aaKnown RBP16.16■□□□□ 0.18
ABCF3-202ENST00000421340 CSN1S1P47710 185 aa16.16■□□□□ 0.18
ABCF3-202ENST00000421340 PSG3Q16557 428 aa16.16■□□□□ 0.18
ABCF3-202ENST00000421340 LCN12Q6JVE5 192 aa16.16■□□□□ 0.18
ABCF3-202ENST00000421340 GBGT1Q8N5D6 347 aa16.16■□□□□ 0.18
ABCF3-202ENST00000421340 CMTM2Q8TAZ6 248 aa16.16■□□□□ 0.18
ABCF3-202ENST00000421340 C11orf52Q96A22 123 aa16.16■□□□□ 0.18
ABCF3-202ENST00000421340 RPUSD4Q96CM3 377 aaKnown RBP16.16■□□□□ 0.18
ABCF3-202ENST00000421340 SLC35B3Q9H1N7 401 aa16.16■□□□□ 0.18
ABCF3-202ENST00000421340 TREM1Q9NP99 234 aa16.16■□□□□ 0.18
ABCF3-202ENST00000421340 COL6A5A8TX70 2615 aa16.15■□□□□ 0.18
ABCF3-202ENST00000421340 SNRPD3P62318 126 aaKnown RBP16.15■□□□□ 0.18
ABCF3-202ENST00000421340 SLC7A5P1Q8MH63 180 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms