RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 IGHV1-69P01742 117 aa11.85□□□□□ -0.51
AP000550.1-201ENST00000420508 OR5A1Q8NGJ0 315 aa11.85□□□□□ -0.51
AP000550.1-201ENST00000420508 FXYD5Q96DB9 178 aa11.85□□□□□ -0.51
AP000550.1-201ENST00000420508 IGHV3OR16-8A0A075B7F1 116 aa11.85□□□□□ -0.51
AP000550.1-201ENST00000420508 PLNP26678 52 aa11.85□□□□□ -0.51
AP000550.1-201ENST00000420508 DUX4L9Q6RFH8 374 aaPredicted RBP11.85□□□□□ -0.51
AP000550.1-201ENST00000420508 ORAOV1Q8WV07 137 aa11.85□□□□□ -0.51
AP000550.1-201ENST00000420508 MRAP2Q96G30 205 aa11.85□□□□□ -0.51
AP000550.1-201ENST00000420508 DAZ1Q9NQZ3 744 aaKnown RBP11.85□□□□□ -0.51
AP000550.1-201ENST00000420508 LOC107984156A0A0G2JMH3 177 aa11.85□□□□□ -0.51
AP000550.1-201ENST00000420508 ARL17AQ8IVW1 177 aa11.85□□□□□ -0.51
AP000550.1-201ENST00000420508 GPR179Q6PRD1 2367 aa11.84□□□□□ -0.51
AP000550.1-201ENST00000420508 PRR30Q53SZ7 412 aaPredicted RBP11.84□□□□□ -0.51
AP000550.1-201ENST00000420508 MRPL53Q96EL3 112 aaKnown RBP11.84□□□□□ -0.51
AP000550.1-201ENST00000420508 A8MWP6 167 aa11.84□□□□□ -0.51
AP000550.1-201ENST00000420508 C18orf32Q8TCD1 76 aa11.84□□□□□ -0.51
AP000550.1-201ENST00000420508 IGLC7A0M8Q6 106 aa11.84□□□□□ -0.51
AP000550.1-201ENST00000420508 SRRM4A7MD48 611 aaKnown RBP11.84□□□□□ -0.51
AP000550.1-201ENST00000420508 IGFBPL1Q8WX77 278 aa11.84□□□□□ -0.51
AP000550.1-201ENST00000420508 LRP4O75096 1905 aa11.84□□□□□ -0.51
AP000550.1-201ENST00000420508 A0A1W2PNU3 283 aaPredicted RBP11.84□□□□□ -0.51
AP000550.1-201ENST00000420508 MSMBP08118 114 aa11.84□□□□□ -0.51
AP000550.1-201ENST00000420508 WT1P19544 449 aaPredicted RBP11.84□□□□□ -0.51
AP000550.1-201ENST00000420508 KLF17Q5JT82 389 aaPredicted RBP11.84□□□□□ -0.51
AP000550.1-201ENST00000420508 PF4P02776 101 aa11.83□□□□□ -0.52
AP000550.1-201ENST00000420508 LURAP1LQ8IV03 231 aa11.83□□□□□ -0.52
AP000550.1-201ENST00000420508 LINC00574Q9H8X3 128 aa11.83□□□□□ -0.52
AP000550.1-201ENST00000420508 CHTOPQ9Y3Y2 248 aaKnown RBP11.83□□□□□ -0.52
AP000550.1-201ENST00000420508 NDUFA4O00483 81 aa11.83□□□□□ -0.52
AP000550.1-201ENST00000420508 FBXL19-AS1Q494R0 122 aa11.83□□□□□ -0.52
AP000550.1-201ENST00000420508 LINC01587Q99440 93 aa11.83□□□□□ -0.52
AP000550.1-201ENST00000420508 CEP250Q9BV73 2442 aa11.83□□□□□ -0.52
AP000550.1-201ENST00000420508 RNF224P0DH78 156 aa11.83□□□□□ -0.52
AP000550.1-201ENST00000420508 NPBQ8NG41 125 aa11.83□□□□□ -0.52
AP000550.1-201ENST00000420508 H3BVH4 76 aa11.82□□□□□ -0.52
AP000550.1-201ENST00000420508 ATP6V0BQ99437 205 aa11.82□□□□□ -0.52
AP000550.1-201ENST00000420508 ZNRD1Q9P1U0 126 aa11.82□□□□□ -0.52
AP000550.1-201ENST00000420508 MUC21A0A0G2JKD1 596 aa11.82□□□□□ -0.52
AP000550.1-201ENST00000420508 MUC21A0A140T8X8 626 aa11.82□□□□□ -0.52
AP000550.1-201ENST00000420508 P0C879 139 aa11.82□□□□□ -0.52
AP000550.1-201ENST00000420508 MUC21Q5SSG8 566 aa11.82□□□□□ -0.52
AP000550.1-201ENST00000420508 ZNF664Q8N3J9 261 aa11.82□□□□□ -0.52
AP000550.1-201ENST00000420508 ICE1Q9Y2F5 2266 aa11.82□□□□□ -0.52
AP000550.1-201ENST00000420508 ATP6V0E1O15342 81 aa11.81□□□□□ -0.52
AP000550.1-201ENST00000420508 FSTL3O95633 263 aa11.81□□□□□ -0.52
AP000550.1-201ENST00000420508 LTAP01374 205 aa11.81□□□□□ -0.52
AP000550.1-201ENST00000420508 IGKV3-20P01619 116 aa11.81□□□□□ -0.52
AP000550.1-201ENST00000420508 VCYO14598 125 aa11.81□□□□□ -0.52
AP000550.1-201ENST00000420508 FBLN7Q53RD9 439 aa11.81□□□□□ -0.52
AP000550.1-201ENST00000420508 YAE1D1Q9NRH1 226 aa11.81□□□□□ -0.52
AP000550.1-201ENST00000420508 CTSZQ9UBR2 303 aa11.81□□□□□ -0.52
AP000550.1-201ENST00000420508 FAM104BQ5XKR9 115 aa11.81□□□□□ -0.52
AP000550.1-201ENST00000420508 STHQ8IWL8 128 aa11.81□□□□□ -0.52
AP000550.1-201ENST00000420508 ITLN2Q8WWU7 325 aaPredicted RBP11.81□□□□□ -0.52
AP000550.1-201ENST00000420508 CYYR1Q96J86 154 aa11.81□□□□□ -0.52
AP000550.1-201ENST00000420508 RBAKDNA6NC62 111 aa11.81□□□□□ -0.52
AP000550.1-201ENST00000420508 IGLV2-14P01704 120 aa11.81□□□□□ -0.52
AP000550.1-201ENST00000420508 ZNF256Q9Y2P7 627 aaPredicted RBP11.81□□□□□ -0.52
AP000550.1-201ENST00000420508 LENEPQ9Y5L5 61 aa11.81□□□□□ -0.52
AP000550.1-201ENST00000420508 ACACAQ13085 2346 aa11.8□□□□□ -0.52
AP000550.1-201ENST00000420508 CNTFRP26992 372 aa11.8□□□□□ -0.52
AP000550.1-201ENST00000420508 TCF15Q12870 199 aa11.8□□□□□ -0.52
AP000550.1-201ENST00000420508 CRIP3Q6Q6R5 217 aa11.8□□□□□ -0.52
AP000550.1-201ENST00000420508 MTURNQ8N3F0 131 aa11.8□□□□□ -0.52
AP000550.1-201ENST00000420508 IGHV3OR16-12A0A075B7B8 117 aa11.8□□□□□ -0.52
AP000550.1-201ENST00000420508 TRAV8-1A0A0A6YYK1 113 aa11.8□□□□□ -0.52
AP000550.1-201ENST00000420508 TMEM219Q86XT9 240 aa11.8□□□□□ -0.52
AP000550.1-201ENST00000420508 MRPL16Q9NX20 251 aaKnown RBP11.8□□□□□ -0.52
AP000550.1-201ENST00000420508 SPCS1Q9Y6A9 102 aa11.8□□□□□ -0.52
AP000550.1-201ENST00000420508 PLA2G2EQ9NZK7 142 aa11.8□□□□□ -0.52
AP000550.1-201ENST00000420508 PRSS2P07478 247 aa11.79□□□□□ -0.52
AP000550.1-201ENST00000420508 LHFPL4Q7Z7J7 247 aa11.79□□□□□ -0.52
AP000550.1-201ENST00000420508 ST6GALNAC6Q969X2 333 aa11.79□□□□□ -0.52
AP000550.1-201ENST00000420508 LINC00479Q96M42 142 aa11.79□□□□□ -0.52
AP000550.1-201ENST00000420508 RHPN1-AS1Q9BWJ2 59 aa11.79□□□□□ -0.52
AP000550.1-201ENST00000420508 JKAMPQ9P055 326 aa11.79□□□□□ -0.52
AP000550.1-201ENST00000420508 ADAMTS9Q9P2N4 1935 aa11.79□□□□□ -0.52
AP000550.1-201ENST00000420508 SRSF2Q01130 221 aaKnown RBP11.79□□□□□ -0.52
AP000550.1-201ENST00000420508 ZNF415Q09FC8 603 aa11.79□□□□□ -0.52
AP000550.1-201ENST00000420508 PRR25Q96S07 402 aa11.79□□□□□ -0.52
AP000550.1-201ENST00000420508 KLF5Q13887 457 aaPredicted RBP11.79□□□□□ -0.52
AP000550.1-201ENST00000420508 SEM1Q6ZVN7 128 aa11.79□□□□□ -0.52
AP000550.1-201ENST00000420508 TDGF1P3P51864 188 aa11.78□□□□□ -0.52
AP000550.1-201ENST00000420508 MEIG1Q5JSS6 88 aa11.78□□□□□ -0.52
AP000550.1-201ENST00000420508 NDUFA3O95167 84 aa11.78□□□□□ -0.52
AP000550.1-201ENST00000420508 OR2K2Q8NGT1 345 aa11.78□□□□□ -0.52
AP000550.1-201ENST00000420508 PCNX2A6NKB5 2137 aa11.78□□□□□ -0.52
AP000550.1-201ENST00000420508 ARMS2P0C7Q2 107 aa11.78□□□□□ -0.52
AP000550.1-201ENST00000420508 SUMO2P61956 95 aaKnown RBP11.78□□□□□ -0.52
AP000550.1-201ENST00000420508 ZNF491Q8N8L2 437 aa11.78□□□□□ -0.52
AP000550.1-201ENST00000420508 FNDC4Q9H6D8 234 aaPredicted RBP11.78□□□□□ -0.52
AP000550.1-201ENST00000420508 TPSG1Q9NRR2 321 aa11.77□□□□□ -0.52
AP000550.1-201ENST00000420508 PLEKHB2Q96CS7 222 aa11.77□□□□□ -0.53
AP000550.1-201ENST00000420508 POLR3KQ9Y2Y1 108 aaPredicted RBP11.77□□□□□ -0.53
AP000550.1-201ENST00000420508 Q8TAT8 98 aa11.77□□□□□ -0.53
AP000550.1-201ENST00000420508 TRBV6-1A0A0K0K1D8 114 aa11.76□□□□□ -0.53
AP000550.1-201ENST00000420508 Q8N8P6 123 aa11.76□□□□□ -0.53
AP000550.1-201ENST00000420508 CEP192Q8TEP8 1941 aa11.76□□□□□ -0.53
AP000550.1-201ENST00000420508 APC2O95996 2303 aa11.76□□□□□ -0.53
AP000550.1-201ENST00000420508 SHANK1Q9Y566 2161 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms