RNA–Protein interactions for RNA: ENST00000419470.6

SFTPA1-202, Transcript of surfactant protein A1, humanhuman

TSL 1 (best) BASIC

Gene SFTPA1, Length 2,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-202ENST00000419470 A0A1W2PPM0 123 aa10.59□□□□□ -0.71
SFTPA1-202ENST00000419470 TMEM189A5PLL7 270 aa10.59□□□□□ -0.71
SFTPA1-202ENST00000419470 ZFP36P26651 326 aaKnown RBP10.59□□□□□ -0.71
SFTPA1-202ENST00000419470 FOXA3P55318 350 aaPredicted RBP10.59□□□□□ -0.71
SFTPA1-202ENST00000419470 KIR3DS1Q14943 382 aa10.59□□□□□ -0.71
SFTPA1-202ENST00000419470 Q5PR19 223 aa10.59□□□□□ -0.71
SFTPA1-202ENST00000419470 PIMREGQ9BSJ6 248 aa10.59□□□□□ -0.71
SFTPA1-202ENST00000419470 ZNRD1Q9P1U0 126 aa10.59□□□□□ -0.71
SFTPA1-202ENST00000419470 SPCS1Q9Y6A9 102 aa10.59□□□□□ -0.71
SFTPA1-202ENST00000419470 APCP25054 2843 aa10.59□□□□□ -0.71
SFTPA1-202ENST00000419470 NAV2Q8IVL1 2488 aa10.59□□□□□ -0.71
SFTPA1-202ENST00000419470 VWC2LB2RUY7 222 aa10.58□□□□□ -0.72
SFTPA1-202ENST00000419470 FGF6P10767 208 aa10.58□□□□□ -0.72
SFTPA1-202ENST00000419470 HSD52Q0P140 79 aa10.58□□□□□ -0.72
SFTPA1-202ENST00000419470 SCGB2A2Q13296 93 aa10.58□□□□□ -0.72
SFTPA1-202ENST00000419470 LINC00311Q8N616 119 aa10.58□□□□□ -0.72
SFTPA1-202ENST00000419470 TMEM133Q9H2Q1 129 aa10.58□□□□□ -0.72
SFTPA1-202ENST00000419470 AMMECR1Q9Y4X0 333 aaPredicted RBP10.58□□□□□ -0.72
SFTPA1-202ENST00000419470 MAP1AP78559 2803 aaPredicted RBP10.58□□□□□ -0.72
SFTPA1-202ENST00000419470 C8orf88P0DMB2 117 aa10.58□□□□□ -0.72
SFTPA1-202ENST00000419470 NDFIP1Q9BT67 221 aa10.58□□□□□ -0.72
SFTPA1-202ENST00000419470 GTSF1LQ9H1H1 148 aa10.58□□□□□ -0.72
SFTPA1-202ENST00000419470 ONECUT1Q9UBC0 465 aa10.58□□□□□ -0.72
SFTPA1-202ENST00000419470 FASNP49327 2511 aaKnown RBP10.57□□□□□ -0.72
SFTPA1-202ENST00000419470 SMAGPQ0VAQ4 97 aa10.57□□□□□ -0.72
SFTPA1-202ENST00000419470 FOXE3Q13461 319 aa10.57□□□□□ -0.72
SFTPA1-202ENST00000419470 ASPHD1Q5U4P2 390 aa10.57□□□□□ -0.72
SFTPA1-202ENST00000419470 OR9G1Q8NH87 305 aa10.57□□□□□ -0.72
SFTPA1-202ENST00000419470 MRPL32Q9BYC8 188 aaKnown RBP10.57□□□□□ -0.72
SFTPA1-202ENST00000419470 RABAC1Q9UI14 185 aa10.57□□□□□ -0.72
SFTPA1-202ENST00000419470 M0R1W7 72 aa10.57□□□□□ -0.72
SFTPA1-202ENST00000419470 DLX1P56177 255 aa10.57□□□□□ -0.72
SFTPA1-202ENST00000419470 DDB2Q92466 427 aa10.57□□□□□ -0.72
SFTPA1-202ENST00000419470 LINC00479Q96M42 142 aa10.57□□□□□ -0.72
SFTPA1-202ENST00000419470 SLC25A33Q9BSK2 321 aa10.57□□□□□ -0.72
SFTPA1-202ENST00000419470 C7orf69Q9H7B7 122 aa10.57□□□□□ -0.72
SFTPA1-202ENST00000419470 TMEM140Q9NV12 185 aa10.57□□□□□ -0.72
SFTPA1-202ENST00000419470 IGHV4-30-2A0A087WSY4 118 aa10.56□□□□□ -0.72
SFTPA1-202ENST00000419470 TRAV3A0A0B4J244 114 aa10.56□□□□□ -0.72
SFTPA1-202ENST00000419470 C15orf61A6NNL5 157 aa10.56□□□□□ -0.72
SFTPA1-202ENST00000419470 H0Y8G0 127 aa10.56□□□□□ -0.72
SFTPA1-202ENST00000419470 PEX7O00628 323 aa10.56□□□□□ -0.72
SFTPA1-202ENST00000419470 SNAI2O43623 268 aa10.56□□□□□ -0.72
SFTPA1-202ENST00000419470 FABP2P12104 132 aa10.56□□□□□ -0.72
SFTPA1-202ENST00000419470 UBE2L3P68036 154 aaKnown RBP10.56□□□□□ -0.72
SFTPA1-202ENST00000419470 ZNF833PQ6ZTB9 187 aa10.56□□□□□ -0.72
SFTPA1-202ENST00000419470 FA2HQ7L5A8 372 aa10.56□□□□□ -0.72
SFTPA1-202ENST00000419470 VKORC1L1Q8N0U8 176 aa10.56□□□□□ -0.72
SFTPA1-202ENST00000419470 TEX45Q8NA69 505 aa10.56□□□□□ -0.72
SFTPA1-202ENST00000419470 OR9G4Q8NGQ1 327 aa10.56□□□□□ -0.72
SFTPA1-202ENST00000419470 WFDC12Q8WWY7 111 aa10.56□□□□□ -0.72
SFTPA1-202ENST00000419470 S1PR3Q99500 378 aa10.56□□□□□ -0.72
SFTPA1-202ENST00000419470 MCRIP2Q9BUT9 160 aaKnown RBP10.56□□□□□ -0.72
SFTPA1-202ENST00000419470 ENY2Q9NPA8 101 aa10.56□□□□□ -0.72
SFTPA1-202ENST00000419470 ZNF257Q9Y2Q1 563 aa10.56□□□□□ -0.72
SFTPA1-202ENST00000419470 IGHV4-61A0A0C4DH41 118 aa10.56□□□□□ -0.72
SFTPA1-202ENST00000419470 TEX48A0A1B0GUV7 120 aa10.56□□□□□ -0.72
SFTPA1-202ENST00000419470 SIVA1O15304 175 aa10.56□□□□□ -0.72
SFTPA1-202ENST00000419470 ENSAO43768 121 aaKnown RBP10.56□□□□□ -0.72
SFTPA1-202ENST00000419470 IGLV1-47P01700 117 aa10.56□□□□□ -0.72
SFTPA1-202ENST00000419470 ZNF137PP52743 207 aa10.56□□□□□ -0.72
SFTPA1-202ENST00000419470 DSCR9P59020 149 aa10.56□□□□□ -0.72
SFTPA1-202ENST00000419470 RPL24P83731 157 aaKnown RBP10.56□□□□□ -0.72
SFTPA1-202ENST00000419470 CT83Q5H943 113 aa10.56□□□□□ -0.72
SFTPA1-202ENST00000419470 OR10W1Q8NGF6 305 aa10.56□□□□□ -0.72
SFTPA1-202ENST00000419470 OR10X1Q8NGY0 326 aa10.56□□□□□ -0.72
SFTPA1-202ENST00000419470 ADTRPQ96IZ2 230 aa10.56□□□□□ -0.72
SFTPA1-202ENST00000419470 SELENOKQ9Y6D0 94 aa10.56□□□□□ -0.72
SFTPA1-202ENST00000419470 CD300EQ496F6 205 aaPredicted RBP10.55□□□□□ -0.72
SFTPA1-202ENST00000419470 C1orf122Q6ZSJ8 110 aa10.55□□□□□ -0.72
SFTPA1-202ENST00000419470 BOD1L2Q8IYS8 172 aa10.55□□□□□ -0.72
SFTPA1-202ENST00000419470 OR4X2Q8NGF9 303 aa10.55□□□□□ -0.72
SFTPA1-202ENST00000419470 NAA38Q9BRA0 125 aaKnown RBP10.55□□□□□ -0.72
SFTPA1-202ENST00000419470 A8MWL6 223 aa10.54□□□□□ -0.72
SFTPA1-202ENST00000419470 KIR2DS2P43631 304 aa10.54□□□□□ -0.72
SFTPA1-202ENST00000419470 HSPE1P61604 102 aaKnown RBP10.54□□□□□ -0.72
SFTPA1-202ENST00000419470 PRB3Q04118 309 aaPredicted RBP10.54□□□□□ -0.72
SFTPA1-202ENST00000419470 HIST2H2BCQ6DN03 193 aa10.54□□□□□ -0.72
SFTPA1-202ENST00000419470 RPP21Q9H633 154 aaKnown RBP10.54□□□□□ -0.72
SFTPA1-202ENST00000419470 THYN1Q9P016 225 aa10.54□□□□□ -0.72
SFTPA1-202ENST00000419470 FOXA2Q9Y261 457 aaPredicted RBP10.54□□□□□ -0.72
SFTPA1-202ENST00000419470 GAGE12HA6NDE8 117 aa10.54□□□□□ -0.72
SFTPA1-202ENST00000419470 CT45A6P0DMU7 189 aa10.54□□□□□ -0.72
SFTPA1-202ENST00000419470 CT45A5P0DMU8 189 aa10.54□□□□□ -0.72
SFTPA1-202ENST00000419470 CT45A7P0DMV0 189 aa10.54□□□□□ -0.72
SFTPA1-202ENST00000419470 PRTN3P24158 256 aa10.54□□□□□ -0.72
SFTPA1-202ENST00000419470 ZNF329Q86UD4 541 aa10.54□□□□□ -0.72
SFTPA1-202ENST00000419470 FAM167A-AS1Q96KT0 104 aa10.54□□□□□ -0.72
SFTPA1-202ENST00000419470 ZNF747Q9BV97 191 aa10.54□□□□□ -0.72
SFTPA1-202ENST00000419470 TMEM14BQ9NUH8 114 aa10.54□□□□□ -0.72
SFTPA1-202ENST00000419470 BEX4Q9NWD9 120 aaPredicted RBP10.54□□□□□ -0.72
SFTPA1-202ENST00000419470 HILPDAQ9Y5L2 63 aa10.54□□□□□ -0.72
SFTPA1-202ENST00000419470 J3QR89 54 aa10.53□□□□□ -0.72
SFTPA1-202ENST00000419470 RAB9AP51151 201 aa10.53□□□□□ -0.72
SFTPA1-202ENST00000419470 SLC25A2Q9BXI2 301 aa10.53□□□□□ -0.72
SFTPA1-202ENST00000419470 GFRA4Q9GZZ7 299 aa10.53□□□□□ -0.72
SFTPA1-202ENST00000419470 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.53□□□□□ -0.72
SFTPA1-202ENST00000419470 IGKV1OR2-108A0A075B7D4 117 aa10.53□□□□□ -0.72
SFTPA1-202ENST00000419470 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.53□□□□□ -0.72
SFTPA1-202ENST00000419470 SMAD7O15105 426 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms