RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 SLC50A1Q9BRV3 221 aa4.59□□□□□ -1.67
HMGB3-202ENST00000419110 PARLQ9H300 379 aa4.59□□□□□ -1.67
HMGB3-202ENST00000419110 OTORQ9NRC9 128 aa4.59□□□□□ -1.67
HMGB3-202ENST00000419110 NAT8Q9UHE5 227 aa4.59□□□□□ -1.67
HMGB3-202ENST00000419110 RPH3ALQ9UNE2 315 aa4.59□□□□□ -1.67
HMGB3-202ENST00000419110 TRBV19A0A075B6N1 114 aa4.58□□□□□ -1.68
HMGB3-202ENST00000419110 IGHV4OR15-8A0A075B7B6 117 aa4.58□□□□□ -1.68
HMGB3-202ENST00000419110 A0A087WW49 117 aa4.58□□□□□ -1.68
HMGB3-202ENST00000419110 IGHV7-4-1A0A0J9YVY3 117 aa4.58□□□□□ -1.68
HMGB3-202ENST00000419110 A0A1B0GUS0 222 aa4.58□□□□□ -1.68
HMGB3-202ENST00000419110 ZNF320A2RRD8 509 aa4.58□□□□□ -1.68
HMGB3-202ENST00000419110 C9JCJ5 164 aa4.58□□□□□ -1.68
HMGB3-202ENST00000419110 C9JQL5 133 aa4.58□□□□□ -1.68
HMGB3-202ENST00000419110 LINC01619G3V211 115 aa4.58□□□□□ -1.68
HMGB3-202ENST00000419110 K7EQM0 130 aa4.58□□□□□ -1.68
HMGB3-202ENST00000419110 ZNF207O43670 478 aaKnown RBP4.58□□□□□ -1.68
HMGB3-202ENST00000419110 NBEAP1P0C6P0 100 aa4.58□□□□□ -1.68
HMGB3-202ENST00000419110 CRYBB3P26998 211 aa4.58□□□□□ -1.68
HMGB3-202ENST00000419110 HOXD3P31249 432 aaPredicted RBP4.58□□□□□ -1.68
HMGB3-202ENST00000419110 CSN1S1P47710 185 aa4.58□□□□□ -1.68
HMGB3-202ENST00000419110 UBE2G1P62253 170 aa4.58□□□□□ -1.68
HMGB3-202ENST00000419110 ADIRFQ15847 76 aa4.58□□□□□ -1.68
HMGB3-202ENST00000419110 GUCA2BQ16661 112 aa4.58□□□□□ -1.68
HMGB3-202ENST00000419110 C10orf91Q5T1B1 145 aa4.58□□□□□ -1.68
HMGB3-202ENST00000419110 SIGLEC15Q6ZMC9 328 aa4.58□□□□□ -1.68
HMGB3-202ENST00000419110 LYPD1Q8N2G4 141 aa4.58□□□□□ -1.68
HMGB3-202ENST00000419110 DPF1Q92782 380 aa4.58□□□□□ -1.68
HMGB3-202ENST00000419110 HIST1H2BAQ96A08 127 aa4.58□□□□□ -1.68
HMGB3-202ENST00000419110 TVP23CQ96ET8 276 aa4.58□□□□□ -1.68
HMGB3-202ENST00000419110 ATG101Q9BSB4 218 aa4.58□□□□□ -1.68
HMGB3-202ENST00000419110 Q9H3A6 140 aa4.58□□□□□ -1.68
HMGB3-202ENST00000419110 PEMTQ9UBM1 199 aa4.58□□□□□ -1.68
HMGB3-202ENST00000419110 PRELID1Q9Y255 219 aa4.58□□□□□ -1.68
HMGB3-202ENST00000419110 RNF114Q9Y508 228 aa4.58□□□□□ -1.68
HMGB3-202ENST00000419110 C2CD3Q4AC94 2353 aa4.57□□□□□ -1.68
HMGB3-202ENST00000419110 SVEP1Q4LDE5 3571 aa4.57□□□□□ -1.68
HMGB3-202ENST00000419110 SETXQ7Z333 2677 aaKnown RBP4.57□□□□□ -1.68
HMGB3-202ENST00000419110 SERTM2A0A1B0GWG4 89 aa4.57□□□□□ -1.68
HMGB3-202ENST00000419110 CLPSL1A2RUU4 121 aa4.57□□□□□ -1.68
HMGB3-202ENST00000419110 ZNF785A8K8V0 405 aa4.57□□□□□ -1.68
HMGB3-202ENST00000419110 H3BQ15 152 aa4.57□□□□□ -1.68
HMGB3-202ENST00000419110 H3BTX0 84 aa4.57□□□□□ -1.68
HMGB3-202ENST00000419110 K7EMT4 169 aa4.57□□□□□ -1.68
HMGB3-202ENST00000419110 BUB3O43684 328 aa4.57□□□□□ -1.68
HMGB3-202ENST00000419110 CDX1P47902 265 aaPredicted RBP4.57□□□□□ -1.68
HMGB3-202ENST00000419110 GNG4P50150 75 aa4.57□□□□□ -1.68
HMGB3-202ENST00000419110 RANP62826 216 aaKnown RBP4.57□□□□□ -1.68
HMGB3-202ENST00000419110 DEFB136Q30KP8 78 aa4.57□□□□□ -1.68
HMGB3-202ENST00000419110 CENPWQ5EE01 88 aa4.57□□□□□ -1.68
HMGB3-202ENST00000419110 UNQ9165/PRO28630Q6UXU0 137 aa4.57□□□□□ -1.68
HMGB3-202ENST00000419110 Q86TA4 180 aa4.57□□□□□ -1.68
HMGB3-202ENST00000419110 GPHB5Q86YW7 130 aa4.57□□□□□ -1.68
HMGB3-202ENST00000419110 CLRN3Q8NCR9 226 aa4.57□□□□□ -1.68
HMGB3-202ENST00000419110 LINC01006Q8NI28 216 aa4.57□□□□□ -1.68
HMGB3-202ENST00000419110 C2CD4CQ8TF44 421 aa4.57□□□□□ -1.68
HMGB3-202ENST00000419110 GLMPQ8WWB7 406 aa4.57□□□□□ -1.68
HMGB3-202ENST00000419110 FMC1Q96HJ9 113 aa4.57□□□□□ -1.68
HMGB3-202ENST00000419110 ZNF586Q9NXT0 402 aa4.57□□□□□ -1.68
HMGB3-202ENST00000419110 CLEC5AQ9NY25 188 aa4.57□□□□□ -1.68
HMGB3-202ENST00000419110 TSSC4Q9Y5U2 329 aaPredicted RBP4.57□□□□□ -1.68
HMGB3-202ENST00000419110 WNK1Q9H4A3 2382 aa4.57□□□□□ -1.68
HMGB3-202ENST00000419110 ZFHX3Q15911 3703 aa4.57□□□□□ -1.68
HMGB3-202ENST00000419110 IGHV3OR16-13A0A075B7E8 117 aa4.56□□□□□ -1.68
HMGB3-202ENST00000419110 IGHV3-49A0A0A0MS15 119 aa4.56□□□□□ -1.68
HMGB3-202ENST00000419110 IGHV3-74A0A0B4J1X5 117 aa4.56□□□□□ -1.68
HMGB3-202ENST00000419110 IGHV3-66A0A0C4DH42 116 aa4.56□□□□□ -1.68
HMGB3-202ENST00000419110 TMEM213A2RRL7 107 aa4.56□□□□□ -1.68
HMGB3-202ENST00000419110 FBLL1A6NHQ2 334 aaKnown RBP4.56□□□□□ -1.68
HMGB3-202ENST00000419110 B4DEV8 164 aa4.56□□□□□ -1.68
HMGB3-202ENST00000419110 LGALS9O00182 355 aa4.56□□□□□ -1.68
HMGB3-202ENST00000419110 SLC17A3O00476 420 aa4.56□□□□□ -1.68
HMGB3-202ENST00000419110 MRPS12O15235 138 aaKnown RBP4.56□□□□□ -1.68
HMGB3-202ENST00000419110 NDUFB4O95168 129 aa4.56□□□□□ -1.68
HMGB3-202ENST00000419110 S100A9P06702 114 aaKnown RBP4.56□□□□□ -1.68
HMGB3-202ENST00000419110 RPL35P42766 123 aaKnown RBP4.56□□□□□ -1.68
HMGB3-202ENST00000419110 SYNJ2BPP57105 145 aa4.56□□□□□ -1.68
HMGB3-202ENST00000419110 SUMO1P63165 101 aaKnown RBP4.56□□□□□ -1.68
HMGB3-202ENST00000419110 GNG5P63218 68 aa4.56□□□□□ -1.68
HMGB3-202ENST00000419110 C16orf54Q6UWD8 224 aa4.56□□□□□ -1.68
HMGB3-202ENST00000419110 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.56□□□□□ -1.68
HMGB3-202ENST00000419110 DYNLRB2Q8TF09 96 aa4.56□□□□□ -1.68
HMGB3-202ENST00000419110 WIPF2Q8TF74 440 aaPredicted RBP4.56□□□□□ -1.68
HMGB3-202ENST00000419110 MRPL53Q96EL3 112 aaKnown RBP4.56□□□□□ -1.68
HMGB3-202ENST00000419110 SMIM12Q96EX1 92 aa4.56□□□□□ -1.68
HMGB3-202ENST00000419110 ZNF414Q96IQ9 312 aa4.56□□□□□ -1.68
HMGB3-202ENST00000419110 DERL1Q9BUN8 251 aa4.56□□□□□ -1.68
HMGB3-202ENST00000419110 NRN1Q9NPD7 142 aa4.56□□□□□ -1.68
HMGB3-202ENST00000419110 LY96Q9Y6Y9 160 aa4.56□□□□□ -1.68
HMGB3-202ENST00000419110 U3KQE9 123 aa4.56□□□□□ -1.68
HMGB3-202ENST00000419110 SETD2Q9BYW2 2564 aaPredicted RBP4.55□□□□□ -1.68
HMGB3-202ENST00000419110 A0A1W2PRX2 142 aa4.55□□□□□ -1.68
HMGB3-202ENST00000419110 PGPA6NDG6 321 aa4.55□□□□□ -1.68
HMGB3-202ENST00000419110 TCRAP04437 139 aa4.55□□□□□ -1.68
HMGB3-202ENST00000419110 SNRPCP09234 159 aaKnown RBP4.55□□□□□ -1.68
HMGB3-202ENST00000419110 CD28P10747 220 aa4.55□□□□□ -1.68
HMGB3-202ENST00000419110 MYCNOSP40205 109 aa4.55□□□□□ -1.68
HMGB3-202ENST00000419110 SLURP1P55000 103 aa4.55□□□□□ -1.68
HMGB3-202ENST00000419110 PROK1P58294 105 aa4.55□□□□□ -1.68
HMGB3-202ENST00000419110 TAS2R60P59551 318 aa4.55□□□□□ -1.68
HMGB3-202ENST00000419110 RPL11P62913 178 aaKnown RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms