RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 LYZL1Q6UWQ5 148 aa9.15□□□□□ -0.94
PTCH1-205ENST00000418258 XCL2Q9UBD3 114 aa9.15□□□□□ -0.94
PTCH1-205ENST00000418258 IGKV1-12A0A0C4DH73 117 aa9.15□□□□□ -0.95
PTCH1-205ENST00000418258 IGKV1D-12P01611 117 aa9.15□□□□□ -0.95
PTCH1-205ENST00000418258 PSG3Q16557 428 aa9.15□□□□□ -0.95
PTCH1-205ENST00000418258 A8MXK9 166 aa9.14□□□□□ -0.95
PTCH1-205ENST00000418258 HAPLN4Q86UW8 402 aa9.14□□□□□ -0.95
PTCH1-205ENST00000418258 DLX4Q92988 240 aaPredicted RBP9.14□□□□□ -0.95
PTCH1-205ENST00000418258 IGKV1-27A0A075B6S5 117 aa9.14□□□□□ -0.95
PTCH1-205ENST00000418258 LHBP01229 141 aa9.14□□□□□ -0.95
PTCH1-205ENST00000418258 SUMO4Q6EEV6 95 aa9.14□□□□□ -0.95
PTCH1-205ENST00000418258 LAIR2Q6ISS4 152 aa9.14□□□□□ -0.95
PTCH1-205ENST00000418258 NR2C2APQ86WQ0 139 aa9.14□□□□□ -0.95
PTCH1-205ENST00000418258 CLDN16Q9Y5I7 305 aa9.14□□□□□ -0.95
PTCH1-205ENST00000418258 IGKV1D-8A0A087WSZ0 117 aa9.14□□□□□ -0.95
PTCH1-205ENST00000418258 CSRP3P50461 194 aa9.14□□□□□ -0.95
PTCH1-205ENST00000418258 ANAPC10Q9UM13 185 aa9.14□□□□□ -0.95
PTCH1-205ENST00000418258 OVOL3O00110 214 aa9.14□□□□□ -0.95
PTCH1-205ENST00000418258 RNF222A6NCQ9 220 aa9.13□□□□□ -0.95
PTCH1-205ENST00000418258 TMEM155Q4W5P6 130 aa9.13□□□□□ -0.95
PTCH1-205ENST00000418258 SPATA31B1PQ5VZV4 182 aa9.13□□□□□ -0.95
PTCH1-205ENST00000418258 ORAOV1Q8WV07 137 aa9.13□□□□□ -0.95
PTCH1-205ENST00000418258 SUPT4H1P63272 117 aaKnown RBP9.13□□□□□ -0.95
PTCH1-205ENST00000418258 CARHSP1Q9Y2V2 147 aaKnown RBP9.13□□□□□ -0.95
PTCH1-205ENST00000418258 EFNA2O43921 213 aa9.13□□□□□ -0.95
PTCH1-205ENST00000418258 PLEKHB2Q96CS7 222 aa9.13□□□□□ -0.95
PTCH1-205ENST00000418258 COL4A6Q14031 1691 aa9.13□□□□□ -0.95
PTCH1-205ENST00000418258 TRAV9-2A0A087WT02 112 aa9.13□□□□□ -0.95
PTCH1-205ENST00000418258 F8VVB4 439 aa9.13□□□□□ -0.95
PTCH1-205ENST00000418258 F8VWA3 439 aa9.13□□□□□ -0.95
PTCH1-205ENST00000418258 IL17RELQ6ZVW7 336 aa9.13□□□□□ -0.95
PTCH1-205ENST00000418258 DKK1O94907 266 aa9.13□□□□□ -0.95
PTCH1-205ENST00000418258 TMEM170AQ8WVE7 144 aa9.13□□□□□ -0.95
PTCH1-205ENST00000418258 EDA2RQ9HAV5 297 aa9.13□□□□□ -0.95
PTCH1-205ENST00000418258 DENND4CQ5VZ89 1909 aa9.13□□□□□ -0.95
PTCH1-205ENST00000418258 KLF12Q9Y4X4 402 aa9.12□□□□□ -0.95
PTCH1-205ENST00000418258 IGHV3-16A0A0C4DH30 117 aa9.12□□□□□ -0.95
PTCH1-205ENST00000418258 SRSF4Q08170 494 aaKnown RBP9.12□□□□□ -0.95
PTCH1-205ENST00000418258 C1orf122Q6ZSJ8 110 aa9.12□□□□□ -0.95
PTCH1-205ENST00000418258 ZNF625Q96I27 306 aaPredicted RBP9.12□□□□□ -0.95
PTCH1-205ENST00000418258 VSIRQ9H7M9 311 aa9.12□□□□□ -0.95
PTCH1-205ENST00000418258 IGKV1D-17A0A075B6S4 117 aa9.12□□□□□ -0.95
PTCH1-205ENST00000418258 SPXQ9BT56 116 aa9.12□□□□□ -0.95
PTCH1-205ENST00000418258 PLXNA2O75051 1894 aa9.12□□□□□ -0.95
PTCH1-205ENST00000418258 SPINK13Q1W4C9 94 aa9.12□□□□□ -0.95
PTCH1-205ENST00000418258 PRR31Q5SQ13 230 aa9.12□□□□□ -0.95
PTCH1-205ENST00000418258 ZNF48Q96MX3 618 aaPredicted RBP9.12□□□□□ -0.95
PTCH1-205ENST00000418258 A8MWV9 139 aa9.12□□□□□ -0.95
PTCH1-205ENST00000418258 NKAPP1Q8N9T2 125 aa9.12□□□□□ -0.95
PTCH1-205ENST00000418258 MEGF9Q9H1U4 602 aa9.12□□□□□ -0.95
PTCH1-205ENST00000418258 ID3Q02535 119 aa9.11□□□□□ -0.95
PTCH1-205ENST00000418258 DMRTC2Q8IXT2 367 aaPredicted RBP9.11□□□□□ -0.95
PTCH1-205ENST00000418258 TRAV8-1A0A0A6YYK1 113 aa9.11□□□□□ -0.95
PTCH1-205ENST00000418258 CR1LQ2VPA4 569 aa9.11□□□□□ -0.95
PTCH1-205ENST00000418258 PRIMA1Q86XR5 153 aa9.11□□□□□ -0.95
PTCH1-205ENST00000418258 WDR83OSQ9Y284 106 aa9.11□□□□□ -0.95
PTCH1-205ENST00000418258 NCOA6Q14686 2063 aaPredicted RBP9.11□□□□□ -0.95
PTCH1-205ENST00000418258 IGHV1-69DA0A0B4J2H0 117 aa9.11□□□□□ -0.95
PTCH1-205ENST00000418258 IGHV1-69P01742 117 aa9.11□□□□□ -0.95
PTCH1-205ENST00000418258 UBE2E1P51965 193 aa9.11□□□□□ -0.95
PTCH1-205ENST00000418258 ZNF562Q6V9R5 426 aa9.11□□□□□ -0.95
PTCH1-205ENST00000418258 FBLN5Q9UBX5 448 aa9.11□□□□□ -0.95
PTCH1-205ENST00000418258 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.11□□□□□ -0.95
PTCH1-205ENST00000418258 AZU1P20160 251 aa9.11□□□□□ -0.95
PTCH1-205ENST00000418258 PRTN3P24158 256 aa9.11□□□□□ -0.95
PTCH1-205ENST00000418258 WFDC1Q9HC57 220 aa9.11□□□□□ -0.95
PTCH1-205ENST00000418258 CREBBPQ92793 2442 aa9.11□□□□□ -0.95
PTCH1-205ENST00000418258 MALRD1Q5VYJ5 2156 aa9.11□□□□□ -0.95
PTCH1-205ENST00000418258 KIAA1549Q9HCM3 1950 aa9.11□□□□□ -0.95
PTCH1-205ENST00000418258 LINC00205P59089 165 aa9.11□□□□□ -0.95
PTCH1-205ENST00000418258 ATP6V0E1O15342 81 aa9.11□□□□□ -0.95
PTCH1-205ENST00000418258 THAP8Q8NA92 274 aa9.11□□□□□ -0.95
PTCH1-205ENST00000418258 TMEM190Q8WZ59 177 aa9.11□□□□□ -0.95
PTCH1-205ENST00000418258 THSD7BQ9C0I4 1608 aa9.1□□□□□ -0.95
PTCH1-205ENST00000418258 LINC01559Q495D7 138 aa9.1□□□□□ -0.95
PTCH1-205ENST00000418258 AGMATQ9BSE5 352 aa9.1□□□□□ -0.95
PTCH1-205ENST00000418258 TMEM126AQ9H061 195 aa9.1□□□□□ -0.95
PTCH1-205ENST00000418258 SAMD5Q5TGI4 173 aa9.1□□□□□ -0.95
PTCH1-205ENST00000418258 LIME1Q9H400 295 aa9.1□□□□□ -0.95
PTCH1-205ENST00000418258 LAMTOR2Q9Y2Q5 125 aa9.1□□□□□ -0.95
PTCH1-205ENST00000418258 TRBV25-1A0A075B6N4 114 aa9.1□□□□□ -0.95
PTCH1-205ENST00000418258 LINC00473A8K010 186 aa9.1□□□□□ -0.95
PTCH1-205ENST00000418258 VWC2LB2RUY7 222 aa9.1□□□□□ -0.95
PTCH1-205ENST00000418258 LYPD3O95274 346 aa9.1□□□□□ -0.95
PTCH1-205ENST00000418258 SMPXQ9UHP9 88 aa9.1□□□□□ -0.95
PTCH1-205ENST00000418258 RFNGQ9Y644 331 aa9.1□□□□□ -0.95
PTCH1-205ENST00000418258 TIMM21Q9BVV7 248 aa9.1□□□□□ -0.95
PTCH1-205ENST00000418258 J3QRE1 110 aa9.1□□□□□ -0.95
PTCH1-205ENST00000418258 IGKV1-16P04430 117 aa9.1□□□□□ -0.95
PTCH1-205ENST00000418258 SRSF3P84103 164 aaKnown RBP9.1□□□□□ -0.95
PTCH1-205ENST00000418258 MCRIP2Q9BUT9 160 aaKnown RBP9.1□□□□□ -0.95
PTCH1-205ENST00000418258 Q6P435 159 aa9.1□□□□□ -0.95
PTCH1-205ENST00000418258 MYMXA0A1B0GTQ4 84 aa9.09□□□□□ -0.95
PTCH1-205ENST00000418258 DSCAMO60469 2012 aa9.09□□□□□ -0.95
PTCH1-205ENST00000418258 GAS1P54826 345 aa9.09□□□□□ -0.95
PTCH1-205ENST00000418258 TCTEX1D4Q5JR98 221 aa9.09□□□□□ -0.95
PTCH1-205ENST00000418258 ZNF114Q8NC26 417 aa9.09□□□□□ -0.95
PTCH1-205ENST00000418258 NUP35Q8NFH5 326 aa9.09□□□□□ -0.95
PTCH1-205ENST00000418258 SRSF8Q9BRL6 282 aaKnown RBP9.09□□□□□ -0.95
PTCH1-205ENST00000418258 SNHG12Q9BXW3 62 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms