RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 NDUFA11Q86Y39 141 aa10.09□□□□□ -0.79
HLA-DMB-258ENST00000418107 CITED2Q99967 270 aaPredicted RBP10.09□□□□□ -0.79
HLA-DMB-258ENST00000418107 LGALS1P09382 135 aaKnown RBP10.08□□□□□ -0.8
HLA-DMB-258ENST00000418107 ATF4P18848 351 aaPredicted RBP10.08□□□□□ -0.8
HLA-DMB-258ENST00000418107 RPEL1Q2QD12 228 aa10.08□□□□□ -0.8
HLA-DMB-258ENST00000418107 FAM74A3Q4VXF1 159 aa10.08□□□□□ -0.8
HLA-DMB-258ENST00000418107 TVP23CQ96ET8 276 aa10.08□□□□□ -0.8
HLA-DMB-258ENST00000418107 UBE2E2Q96LR5 201 aa10.08□□□□□ -0.8
HLA-DMB-258ENST00000418107 TENM3Q9P273 2699 aa10.08□□□□□ -0.8
HLA-DMB-258ENST00000418107 COL7A1Q02388 2944 aa10.08□□□□□ -0.8
HLA-DMB-258ENST00000418107 IGHV3OR16-13A0A075B7E8 117 aa10.07□□□□□ -0.8
HLA-DMB-258ENST00000418107 IGHV3-49A0A0A0MS15 119 aa10.07□□□□□ -0.8
HLA-DMB-258ENST00000418107 IGHV3-74A0A0B4J1X5 117 aa10.07□□□□□ -0.8
HLA-DMB-258ENST00000418107 SCO2A0A1W2PP80 73 aa10.07□□□□□ -0.8
HLA-DMB-258ENST00000418107 ZNF785A8K8V0 405 aa10.07□□□□□ -0.8
HLA-DMB-258ENST00000418107 H3BQ15 152 aa10.07□□□□□ -0.8
HLA-DMB-258ENST00000418107 SCO1O75880 301 aa10.07□□□□□ -0.8
HLA-DMB-258ENST00000418107 NDUFB4O95168 129 aa10.07□□□□□ -0.8
HLA-DMB-258ENST00000418107 SLC25A5P05141 298 aaKnown RBP10.07□□□□□ -0.8
HLA-DMB-258ENST00000418107 IGLL1P15814 213 aa10.07□□□□□ -0.8
HLA-DMB-258ENST00000418107 FAM90A2PQ658T7 463 aa10.07□□□□□ -0.8
HLA-DMB-258ENST00000418107 CLRN3Q8NCR9 226 aa10.07□□□□□ -0.8
HLA-DMB-258ENST00000418107 PARLQ9H300 379 aa10.07□□□□□ -0.8
HLA-DMB-258ENST00000418107 IGHV3-66A0A0C4DH42 116 aa10.06□□□□□ -0.8
HLA-DMB-258ENST00000418107 PGPA6NDG6 321 aa10.06□□□□□ -0.8
HLA-DMB-258ENST00000418107 K7EIL1 84 aa10.06□□□□□ -0.8
HLA-DMB-258ENST00000418107 GALR1P47211 349 aa10.06□□□□□ -0.8
HLA-DMB-258ENST00000418107 TMEM241Q24JQ0 296 aa10.06□□□□□ -0.8
HLA-DMB-258ENST00000418107 RNF152Q8N8N0 203 aa10.06□□□□□ -0.8
HLA-DMB-258ENST00000418107 WIPF2Q8TF74 440 aaPredicted RBP10.06□□□□□ -0.8
HLA-DMB-258ENST00000418107 GRAMD2BQ96HH9 432 aa10.06□□□□□ -0.8
HLA-DMB-258ENST00000418107 GPR82Q96P67 336 aa10.06□□□□□ -0.8
HLA-DMB-258ENST00000418107 Q9H3A6 140 aa10.06□□□□□ -0.8
HLA-DMB-258ENST00000418107 ZNF586Q9NXT0 402 aa10.06□□□□□ -0.8
HLA-DMB-258ENST00000418107 RPH3ALQ9UNE2 315 aa10.06□□□□□ -0.8
HLA-DMB-258ENST00000418107 A0A1W2PRX2 142 aa10.05□□□□□ -0.8
HLA-DMB-258ENST00000418107 GGTLC3B5MD39 225 aa10.05□□□□□ -0.8
HLA-DMB-258ENST00000418107 CD33P20138 364 aa10.05□□□□□ -0.8
HLA-DMB-258ENST00000418107 CRYBB3P26998 211 aa10.05□□□□□ -0.8
HLA-DMB-258ENST00000418107 AKR1C3P42330 323 aa10.05□□□□□ -0.8
HLA-DMB-258ENST00000418107 ATRAIDQ6UW56 229 aa10.05□□□□□ -0.8
HLA-DMB-258ENST00000418107 CMTM2Q8TAZ6 248 aa10.05□□□□□ -0.8
HLA-DMB-258ENST00000418107 DPF1Q92782 380 aa10.05□□□□□ -0.8
HLA-DMB-258ENST00000418107 ELOVL1Q9BW60 279 aa10.05□□□□□ -0.8
HLA-DMB-258ENST00000418107 RPS10P5Q9NQ39 176 aa10.05□□□□□ -0.8
HLA-DMB-258ENST00000418107 OTORQ9NRC9 128 aa10.05□□□□□ -0.8
HLA-DMB-258ENST00000418107 NAT8Q9UHE5 227 aa10.05□□□□□ -0.8
HLA-DMB-258ENST00000418107 A0A1W2PS18 150 aa10.04□□□□□ -0.8
HLA-DMB-258ENST00000418107 IGLC2P0DOY2 106 aa10.04□□□□□ -0.8
HLA-DMB-258ENST00000418107 ADIRFQ15847 76 aa10.04□□□□□ -0.8
HLA-DMB-258ENST00000418107 C1orf194Q5T5A4 169 aa10.04□□□□□ -0.8
HLA-DMB-258ENST00000418107 UNQ9165/PRO28630Q6UXU0 137 aa10.04□□□□□ -0.8
HLA-DMB-258ENST00000418107 MYOZ3Q8TDC0 251 aa10.04□□□□□ -0.8
HLA-DMB-258ENST00000418107 TMEM190Q8WZ59 177 aa10.04□□□□□ -0.8
HLA-DMB-258ENST00000418107 ZNF414Q96IQ9 312 aa10.04□□□□□ -0.8
HLA-DMB-258ENST00000418107 AAMDCQ9H7C9 122 aa10.04□□□□□ -0.8
HLA-DMB-258ENST00000418107 TRBV19A0A075B6N1 114 aa10.03□□□□□ -0.8
HLA-DMB-258ENST00000418107 IGHV4OR15-8A0A075B7B6 117 aa10.03□□□□□ -0.8
HLA-DMB-258ENST00000418107 A0A087WW49 117 aa10.03□□□□□ -0.8
HLA-DMB-258ENST00000418107 HELTA6NFD8 242 aa10.03□□□□□ -0.8
HLA-DMB-258ENST00000418107 BUB3O43684 328 aa10.03□□□□□ -0.8
HLA-DMB-258ENST00000418107 APOHP02749 345 aaPredicted RBP10.03□□□□□ -0.8
HLA-DMB-258ENST00000418107 CNN1P51911 297 aaKnown RBP10.03□□□□□ -0.8
HLA-DMB-258ENST00000418107 PSG9Q00887 426 aa10.03□□□□□ -0.8
HLA-DMB-258ENST00000418107 GPHB5Q86YW7 130 aa10.03□□□□□ -0.8
HLA-DMB-258ENST00000418107 KLHL30-AS1Q8NEE0 82 aa10.03□□□□□ -0.8
HLA-DMB-258ENST00000418107 WFDC9Q8NEX5 89 aa10.03□□□□□ -0.8
HLA-DMB-258ENST00000418107 C11orf52Q96A22 123 aa10.03□□□□□ -0.8
HLA-DMB-258ENST00000418107 C17orf77Q96MU5 243 aa10.03□□□□□ -0.8
HLA-DMB-258ENST00000418107 SDF2L1Q9HCN8 221 aa10.03□□□□□ -0.8
HLA-DMB-258ENST00000418107 UFC1Q9Y3C8 167 aa10.03□□□□□ -0.8
HLA-DMB-258ENST00000418107 PEX7O00628 323 aa10.02□□□□□ -0.8
HLA-DMB-258ENST00000418107 MRPS12O15235 138 aaKnown RBP10.02□□□□□ -0.8
HLA-DMB-258ENST00000418107 BMI1P35226 326 aa10.02□□□□□ -0.8
HLA-DMB-258ENST00000418107 CDX1P47902 265 aaPredicted RBP10.02□□□□□ -0.8
HLA-DMB-258ENST00000418107 GNG5P63218 68 aa10.02□□□□□ -0.8
HLA-DMB-258ENST00000418107 PNRC1Q12796 327 aaPredicted RBP10.02□□□□□ -0.8
HLA-DMB-258ENST00000418107 BTN1A1Q13410 526 aa10.02□□□□□ -0.8
HLA-DMB-258ENST00000418107 PDE6HQ13956 83 aa10.02□□□□□ -0.8
HLA-DMB-258ENST00000418107 TM4SF20Q53R12 229 aa10.02□□□□□ -0.8
HLA-DMB-258ENST00000418107 DEFB121Q5J5C9 76 aa10.02□□□□□ -0.8
HLA-DMB-258ENST00000418107 SIGLEC15Q6ZMC9 328 aa10.02□□□□□ -0.8
HLA-DMB-258ENST00000418107 LYPD1Q8N2G4 141 aa10.02□□□□□ -0.8
HLA-DMB-258ENST00000418107 EXOC3-AS1Q8N2X6 119 aa10.02□□□□□ -0.8
HLA-DMB-258ENST00000418107 C5orf17Q8NAS9 161 aa10.02□□□□□ -0.8
HLA-DMB-258ENST00000418107 TCEAL7Q9BRU2 100 aa10.02□□□□□ -0.8
HLA-DMB-258ENST00000418107 DERL1Q9BUN8 251 aa10.02□□□□□ -0.8
HLA-DMB-258ENST00000418107 DAZ1Q9NQZ3 744 aaKnown RBP10.02□□□□□ -0.8
HLA-DMB-258ENST00000418107 EPDR1Q9UM22 224 aa10.02□□□□□ -0.8
HLA-DMB-258ENST00000418107 U3KQE9 123 aa10.02□□□□□ -0.8
HLA-DMB-258ENST00000418107 IGHV7-4-1A0A0J9YVY3 117 aa10.01□□□□□ -0.81
HLA-DMB-258ENST00000418107 C7orf77A4D0Y5 90 aa10.01□□□□□ -0.81
HLA-DMB-258ENST00000418107 RPL35P42766 123 aaKnown RBP10.01□□□□□ -0.81
HLA-DMB-258ENST00000418107 CSN1S1P47710 185 aa10.01□□□□□ -0.81
HLA-DMB-258ENST00000418107 KRTAP10-11P60412 298 aa10.01□□□□□ -0.81
HLA-DMB-258ENST00000418107 UBE2G1P62253 170 aa10.01□□□□□ -0.81
HLA-DMB-258ENST00000418107 RPL11P62913 178 aaKnown RBP10.01□□□□□ -0.81
HLA-DMB-258ENST00000418107 RHEBQ15382 184 aa10.01□□□□□ -0.81
HLA-DMB-258ENST00000418107 C16orf54Q6UWD8 224 aa10.01□□□□□ -0.81
HLA-DMB-258ENST00000418107 C18orf65Q6ZTR6 163 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms