RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-231	ENST00000417521	TRAV5	A0A0B4J249	113 aa		11.99	□□□□□ -0.49
DDR1-231	ENST00000417521	LCE6A	A0A183	80 aa		11.99	□□□□□ -0.49
DDR1-231	ENST00000417521	KANTR	A0A1W2PQU2	76 aa		11.99	□□□□□ -0.49
DDR1-231	ENST00000417521	BCL2L11	O43521	198 aa		11.99	□□□□□ -0.49
DDR1-231	ENST00000417521	PFDN1	O60925	122 aa		11.99	□□□□□ -0.49
DDR1-231	ENST00000417521	JTB	O76095	146 aa		11.99	□□□□□ -0.49
DDR1-231	ENST00000417521	TRPT1	Q86TN4	253 aa	Known RBP	11.99	□□□□□ -0.49
DDR1-231	ENST00000417521	TIMM9	Q9Y5J7	89 aa		11.99	□□□□□ -0.49
DDR1-231	ENST00000417521	S100A7	P31151	101 aa		11.98	□□□□□ -0.49
DDR1-231	ENST00000417521	TMEM41B	Q5BJD5	291 aa		11.98	□□□□□ -0.49
DDR1-231	ENST00000417521	PSMG4	Q5JS54	123 aa		11.98	□□□□□ -0.49
DDR1-231	ENST00000417521	SPATA31B1P	Q5VZV4	182 aa		11.98	□□□□□ -0.49
DDR1-231	ENST00000417521	MORN3	Q6PF18	240 aa	Predicted RBP	11.98	□□□□□ -0.49
DDR1-231	ENST00000417521	SACS	Q9NZJ4	4579 aa		11.98	□□□□□ -0.49
DDR1-231	ENST00000417521	KNCN	A6PVL3	124 aa		11.97	□□□□□ -0.49
DDR1-231	ENST00000417521	SPP1	P10451	314 aa		11.97	□□□□□ -0.49
DDR1-231	ENST00000417521	NKX2-5	P52952	324 aa	Predicted RBP	11.97	□□□□□ -0.49
DDR1-231	ENST00000417521	FAM78B	Q5VT40	261 aa		11.97	□□□□□ -0.49
DDR1-231	ENST00000417521	S100A7A	Q86SG5	101 aa		11.97	□□□□□ -0.49
DDR1-231	ENST00000417521	C9orf62	Q8N4C0	152 aa		11.97	□□□□□ -0.49
DDR1-231	ENST00000417521	PSMG3	Q9BT73	122 aa	Predicted RBP	11.97	□□□□□ -0.49
DDR1-231	ENST00000417521	ZNF471	Q9BX82	626 aa	Predicted RBP	11.97	□□□□□ -0.49
DDR1-231	ENST00000417521	RYR2	Q92736	4967 aa		11.97	□□□□□ -0.49
DDR1-231	ENST00000417521	RAB2A	P61019	212 aa		11.96	□□□□□ -0.49
DDR1-231	ENST00000417521	ACTL10	Q5JWF8	245 aa		11.96	□□□□□ -0.49
DDR1-231	ENST00000417521	MIR17HG	Q75NE6	70 aa		11.96	□□□□□ -0.49
DDR1-231	ENST00000417521	OR11H2	Q8NH07	326 aa		11.96	□□□□□ -0.49
DDR1-231	ENST00000417521	GNPNAT1	Q96EK6	184 aa	Predicted RBP	11.96	□□□□□ -0.49
DDR1-231	ENST00000417521	C17orf77	Q96MU5	243 aa		11.96	□□□□□ -0.49
DDR1-231	ENST00000417521	EIF3G	O75821	320 aa	Known RBP eCLIP	11.95	□□□□□ -0.5
DDR1-231	ENST00000417521	GIG44	P09565	113 aa	Predicted RBP	11.95	□□□□□ -0.5
DDR1-231	ENST00000417521	RPL7	P18124	248 aa	Known RBP	11.95	□□□□□ -0.5
DDR1-231	ENST00000417521	GALR1	P47211	349 aa		11.95	□□□□□ -0.5
DDR1-231	ENST00000417521	OR2G3	Q8NGZ4	309 aa		11.95	□□□□□ -0.5
DDR1-231	ENST00000417521	LYST	Q99698	3801 aa		11.95	□□□□□ -0.5
DDR1-231	ENST00000417521	MRPS12	O15235	138 aa	Known RBP	11.95	□□□□□ -0.5
DDR1-231	ENST00000417521	SNRPC	P09234	159 aa	Known RBP	11.95	□□□□□ -0.5
DDR1-231	ENST00000417521	ACOT6	Q3I5F7	207 aa	Predicted RBP	11.95	□□□□□ -0.5
DDR1-231	ENST00000417521	GPR82	Q96P67	336 aa		11.95	□□□□□ -0.5
DDR1-231	ENST00000417521	FUT9	Q9Y231	359 aa		11.95	□□□□□ -0.5
DDR1-231	ENST00000417521	CXorf65	A6NEN9	183 aa		11.94	□□□□□ -0.5
DDR1-231	ENST00000417521	M6PR	P20645	277 aa		11.94	□□□□□ -0.5
DDR1-231	ENST00000417521	ID1	P41134	155 aa		11.94	□□□□□ -0.5
DDR1-231	ENST00000417521	SERF2	P84101	59 aa		11.94	□□□□□ -0.5
DDR1-231	ENST00000417521	SAMD13	Q5VXD3	122 aa		11.94	□□□□□ -0.5
DDR1-231	ENST00000417521	FAM122C	Q6P4D5	195 aa		11.94	□□□□□ -0.5
DDR1-231	ENST00000417521	OR10G4	Q8NGN3	311 aa		11.94	□□□□□ -0.5
DDR1-231	ENST00000417521	OR10G9	Q8NGN4	311 aa		11.94	□□□□□ -0.5
DDR1-231	ENST00000417521	OR10G7	Q8NGN6	311 aa		11.94	□□□□□ -0.5
DDR1-231	ENST00000417521	SLC25A2	Q9BXI2	301 aa		11.94	□□□□□ -0.5
DDR1-231	ENST00000417521	C11orf68	Q9H3H3	251 aa	Known RBP	11.94	□□□□□ -0.5
DDR1-231	ENST00000417521	RNF24	Q9Y225	148 aa		11.94	□□□□□ -0.5
DDR1-231	ENST00000417521		H3BMM0	161 aa		11.93	□□□□□ -0.5
DDR1-231	ENST00000417521	NUTF2	P61970	127 aa	Known RBP	11.93	□□□□□ -0.5
DDR1-231	ENST00000417521	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		11.93	□□□□□ -0.5
DDR1-231	ENST00000417521	BPIFA4P	Q86YQ2	179 aa		11.93	□□□□□ -0.5
DDR1-231	ENST00000417521	FAM167A-AS1	Q96KT0	104 aa		11.93	□□□□□ -0.5
DDR1-231	ENST00000417521	MRPL32	Q9BYC8	188 aa	Known RBP	11.93	□□□□□ -0.5
DDR1-231	ENST00000417521	NUPR2	A6NF83	97 aa		11.92	□□□□□ -0.5
DDR1-231	ENST00000417521		H3BTX0	84 aa		11.92	□□□□□ -0.5
DDR1-231	ENST00000417521	SOCS3	O14543	225 aa		11.92	□□□□□ -0.5
DDR1-231	ENST00000417521	PYY	P10082	97 aa		11.92	□□□□□ -0.5
DDR1-231	ENST00000417521	C4BPB	P20851	252 aa		11.92	□□□□□ -0.5
DDR1-231	ENST00000417521	PSMB3	P49720	205 aa		11.92	□□□□□ -0.5
DDR1-231	ENST00000417521	MEOX2	P50222	304 aa		11.92	□□□□□ -0.5
DDR1-231	ENST00000417521	RHOB	P62745	196 aa		11.92	□□□□□ -0.5
DDR1-231	ENST00000417521	PMS2P11	Q13670	270 aa		11.92	□□□□□ -0.5
DDR1-231	ENST00000417521	RPP25L	Q8N5L8	163 aa	Known RBP	11.92	□□□□□ -0.5
DDR1-231	ENST00000417521	RPRM	Q9NS64	109 aa		11.92	□□□□□ -0.5
DDR1-231	ENST00000417521		H3BQ15	152 aa		11.91	□□□□□ -0.5
DDR1-231	ENST00000417521	ISLR	O14498	428 aa		11.91	□□□□□ -0.5
DDR1-231	ENST00000417521	HMGB3	O15347	200 aa	Known RBP	11.91	□□□□□ -0.5
DDR1-231	ENST00000417521	IGLC2	P0DOY2	106 aa		11.91	□□□□□ -0.5
DDR1-231	ENST00000417521	HLA-DRB4	P13762	266 aa		11.91	□□□□□ -0.5
DDR1-231	ENST00000417521	CEMP1	Q6PRD7	247 aa	Predicted RBP	11.91	□□□□□ -0.5
DDR1-231	ENST00000417521	BAP18	Q8IXM2	172 aa		11.91	□□□□□ -0.5
DDR1-231	ENST00000417521	CSNK1G2-AS1	Q8NCQ2	148 aa		11.91	□□□□□ -0.5
DDR1-231	ENST00000417521	STOML3	Q8TAV4	291 aa		11.91	□□□□□ -0.5
DDR1-231	ENST00000417521	C1QTNF4	Q9BXJ3	329 aa		11.91	□□□□□ -0.5
DDR1-231	ENST00000417521	PLA2G2E	Q9NZK7	142 aa		11.91	□□□□□ -0.5
DDR1-231	ENST00000417521	BOLA1	Q9Y3E2	137 aa		11.91	□□□□□ -0.5
DDR1-231	ENST00000417521	HLA-DRB4	X5D2U9	266 aa		11.91	□□□□□ -0.5
DDR1-231	ENST00000417521	DNAH1	Q9P2D7	4330 aa		11.91	□□□□□ -0.5
DDR1-231	ENST00000417521		A0A087X0K7	114 aa		11.9	□□□□□ -0.5
DDR1-231	ENST00000417521		A0A1W2PPV4	95 aa		11.9	□□□□□ -0.5
DDR1-231	ENST00000417521	ZNF705E	A8MWA4	302 aa	Predicted RBP	11.9	□□□□□ -0.5
DDR1-231	ENST00000417521	BOLA2-SMG1P6	H3BVE0	249 aa		11.9	□□□□□ -0.5
DDR1-231	ENST00000417521	MB	P02144	154 aa		11.9	□□□□□ -0.5
DDR1-231	ENST00000417521	TPT1	P13693	172 aa	Known RBP	11.9	□□□□□ -0.5
DDR1-231	ENST00000417521	EIF5A	P63241	154 aa	Known RBP	11.9	□□□□□ -0.5
DDR1-231	ENST00000417521	IGFL4	Q6B9Z1	124 aa		11.9	□□□□□ -0.5
DDR1-231	ENST00000417521	LINC00052	Q96N35	136 aa		11.9	□□□□□ -0.5
DDR1-231	ENST00000417521	TMEM14C	Q9P0S9	112 aa		11.9	□□□□□ -0.5
DDR1-231	ENST00000417521	PLEC	Q15149	4684 aa	Known RBP	11.9	□□□□□ -0.5
DDR1-231	ENST00000417521	SEC11B	P0C7V7	166 aa		11.89	□□□□□ -0.51
DDR1-231	ENST00000417521	MIF	P14174	115 aa		11.89	□□□□□ -0.51
DDR1-231	ENST00000417521	CDC34	P49427	236 aa	Predicted RBP	11.89	□□□□□ -0.51
DDR1-231	ENST00000417521	AKR1C8P	Q5T2L2	129 aa		11.89	□□□□□ -0.51
DDR1-231	ENST00000417521	FOXI2	Q6ZQN5	318 aa		11.89	□□□□□ -0.51
DDR1-231	ENST00000417521		Q8NAQ8	132 aa		11.89	□□□□□ -0.51

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